Detailed information NTG0027120

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: PING_RS17460
• Genome accession: NC_008709
• Coordinates: 4176925..4178001 (-)
• Length: 358 a.a.
• NCBI ID: WP_011771619.1
• Uniprot ID: A1T002
• Organism: Psychromonas ingrahamii 37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4171925..4183001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PING_RS17445 (Ping_3378)	csrA	4172257..4172433 (-)	177	WP_011771616.1	carbon storage regulator CsrA	-
PING_RS17450 (Ping_3379)	-	4172531..4173763 (-)	1233	WP_011771617.1	aspartate kinase	-
PING_RS17455 (Ping_3380)	alaS	4173810..4176413 (-)	2604	WP_011771618.1	alanine--tRNA ligase	-
PING_RS17460 (Ping_3381)	recA	4176925..4178001 (-)	1077	WP_011771619.1	recombinase RecA	Machinery gene
PING_RS17465 (Ping_3382)	-	4178147..4178644 (-)	498	WP_011771620.1	CinA family protein	-
PING_RS17470 (Ping_3383)	mutS	4178736..4181306 (+)	2571	WP_011771621.1	DNA mismatch repair protein MutS	-
PING_RS17475 (Ping_3384)	-	4181819..4182220 (-)	402	WP_011771622.1	hypothetical protein	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38485.14 Da
• Isoelectric Point: 6.3040

>NTDB_id=27120 PING_RS17460 WP_011771619.1 4176925..4178001(-) (recA) [Psychromonas ingrahamii 37]
MSQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPYGRCVEVYGPESSGKTTLTLQ
VIAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQPDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGD
MGDSHMGLQARLMSQALRKLTGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEII
GNETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKIGQGKSNASQYLKDNPASAEE
LEAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG

Nucleotide

• Length: 1077 bp

>NTDB_id=27120 PING_RS17460 WP_011771619.1 4176925..4178001(-) (recA) [Psychromonas ingrahamii 37]
ATGAGTCAGGATAAAAACAAAGATAAAGCATTAGCCGCAGCCCTTGGACAAATTGAAAAACAATTTGGTAAAGGTTCAAT
CATGCGTTTAGGTGATGATGCAGCATCGATGGAAATTGATTCTGTTTCAACTGGCTCATTAAGTTTGGATGTTGCGTTGG
GTATAGGTGGCTTGCCCTACGGCCGTTGTGTTGAAGTTTATGGTCCGGAGAGTTCGGGTAAGACAACCCTAACCTTACAA
GTTATTGCCGAAGCGCAAAAACAAGGTAAAACCTGTGCATTTATTGATGCCGAACATGCACTTGATCCGACTTATGCCAA
AAAACTCGGCGTGGATGTTGACAACCTGCTTATCTCTCAGCCGGATACCGGTGAGCAAGCATTAGAAATCTGTGACATGC
TGGTGCGCTCTGGTGCAGTAGGTGTGGTGGTGGTAGATTCCGTTGCCGCGTTAACACCTAAAGCTGAGATTGAAGGCGAT
ATGGGTGATTCACACATGGGTCTGCAAGCACGTTTAATGTCGCAAGCATTACGTAAATTAACCGGGAACATCAAACAGAC
CAATACTATGGTTATTTTCATTAACCAAATCCGCATGAAGATCGGTGTTATGTTTGGCAATCCCGAAACGACTACGGGTG
GTAATGCGCTTAAGTTCTATGCTTCTGTTCGTTTAGATATCCGCCGTATTGGCGCGATTAAAAACGGTGAAGAAATTATT
GGTAATGAAACACGCGTAAAAGTGGTTAAAAATAAAGTCGCGCCACCTTTTAAGCAAGCAGAGTTTCAGATTCTATATGG
TAAAGGTATTAACCATTTCGGTGAGTTGGTTGACTTAGGTGTTAAACAAGAGTTTGTTGAAAAAGCGGGTTCTTGGTACT
CGTACAATGGTGCTAAAATTGGTCAAGGTAAGAGCAATGCAAGCCAGTATTTAAAAGATAACCCGGCATCAGCCGAAGAG
CTTGAAGCTAAAATTCGCGAAGCGTTAATGCCGAAAGCAGAAGTCATTGAAGATAAAAAAATAATTGCAGAGAAAAAAGT
AACTGAAGATAAAAAAGTAACTGCCTCAGAGGGTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

3D structure

• AlphaFold DB: A1T002

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.64	96.927	0.723
recA	Vibrio cholerae strain A1552	74.64	96.927	0.723
recA	Pseudomonas stutzeri DSM 10701	72.334	96.927	0.701
recA	Acinetobacter baylyi ADP1	75.758	92.179	0.698
recA	Acinetobacter baumannii D1279779	75.229	91.341	0.687
recA	Glaesserella parasuis strain SC1401	73.994	90.223	0.668
recA	Neisseria gonorrhoeae MS11	70.859	91.061	0.645
recA	Neisseria gonorrhoeae MS11	70.859	91.061	0.645
recA	Neisseria gonorrhoeae strain FA1090	70.859	91.061	0.645
recA	Ralstonia pseudosolanacearum GMI1000	73.718	87.151	0.642
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.988	93.855	0.601
recA	Helicobacter pylori strain NCTC11637	63.205	94.134	0.595
recA	Helicobacter pylori 26695	63.205	94.134	0.595
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.832	91.341	0.592
recA	Bacillus subtilis subsp. subtilis str. 168	64.907	89.944	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	62.5	91.62	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.774	91.341	0.564
recA	Streptococcus mitis NCTC 12261	59.412	94.972	0.564
recA	Streptococcus mutans UA159	61.111	90.503	0.553
recA	Streptococcus mitis SK321	60.802	90.503	0.55
recA	Streptococcus pyogenes NZ131	60.802	90.503	0.55
recA	Lactococcus lactis subsp. cremoris KW2	58.507	93.575	0.547
recA	Streptococcus pneumoniae R6	60.185	90.503	0.545
recA	Streptococcus pneumoniae TIGR4	60.185	90.503	0.545
recA	Streptococcus pneumoniae D39	60.185	90.503	0.545
recA	Streptococcus pneumoniae Rx1	60.185	90.503	0.545