Detailed information NTG0027012

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: PPRO_RS15820
• Genome accession: NC_008609
• Coordinates: 3494239..3495261 (-)
• Length: 340 a.a.
• NCBI ID: WP_011737004.1
• Uniprot ID: -
• Organism: Pelobacter propionicus DSM 2379
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3489239..3500261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPRO_RS15805 (Ppro_3176)	alaS	3489925..3492561 (-)	2637	WP_011737001.1	alanine--tRNA ligase	-
PPRO_RS15810 (Ppro_3177)	-	3492599..3493090 (-)	492	WP_011737002.1	regulatory protein RecX	-
PPRO_RS15815 (Ppro_3178)	-	3493059..3494225 (-)	1167	WP_011737003.1	type IV pilus twitching motility protein PilT	-
PPRO_RS15820 (Ppro_3179)	recA	3494239..3495261 (-)	1023	WP_011737004.1	recombinase RecA	Machinery gene
PPRO_RS15825 (Ppro_3180)	-	3495453..3496844 (-)	1392	WP_011737005.1	NADH-quinone oxidoreductase subunit N	-
PPRO_RS15830 (Ppro_3181)	-	3496834..3498438 (-)	1605	WP_011734584.1	NuoM family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36384.86 Da
• Isoelectric Point: 5.8158

>NTDB_id=27012 PPRO_RS15820 WP_011737004.1 3494239..3495261(-) (recA) [Pelobacter propionicus DSM 2379]
MSDKTSSPEKNRAIDLALSQIEKQFGKGAVMRLGNDEALPGVEAISTGSISLDMALGVGGVPRGRIVEIYGPESSGKTTL
ALHIVAEAMKQGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAETLVRSGAIDVLVIDSVAALVPKAEI
EGDMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIATLKQGD
AVIGSRTKVKVVKNKVAPPFREVEFDILYGEGISRTGDVLDLAVDKGIVEKSGAWYSYGKERIGQGRENSRTFLTEHPEV
LADIEGKLMDLLRGPAVTNE

Nucleotide

• Length: 1023 bp

>NTDB_id=27012 PPRO_RS15820 WP_011737004.1 3494239..3495261(-) (recA) [Pelobacter propionicus DSM 2379]
ATGTCGGATAAAACCAGCTCCCCGGAAAAAAACAGGGCCATAGATCTGGCGCTCAGCCAGATCGAGAAGCAGTTCGGAAA
GGGTGCCGTCATGCGCCTGGGAAACGACGAGGCTCTGCCCGGCGTTGAGGCCATCTCCACCGGTTCCATCTCCCTTGACA
TGGCATTGGGAGTTGGCGGTGTTCCCCGGGGGAGGATCGTGGAGATCTACGGCCCGGAATCCTCCGGCAAGACCACCCTG
GCGCTGCACATCGTTGCCGAGGCCATGAAGCAGGGGGGCATCGCTGCTTTTGTTGATGCCGAGCATGCCCTGGACATCGG
CTATGCCCGCAAATTGGGGGTCAAGACCGATGACCTGCTGGTTTCCCAGCCGGATACCGGCGAACAGGCCCTGGAGATCG
CCGAAACCCTGGTGCGCAGCGGCGCCATCGACGTGCTGGTGATCGACTCCGTGGCAGCGCTGGTGCCCAAGGCCGAGATC
GAGGGGGACATGGGCGACTCCCACATGGGACTGCAGGCTCGGCTCATGTCCCAGGCCCTGCGCAAGCTGACCGGCATCAT
CTCCAAGTCCAACTGCTGCGTGATCTTCATCAACCAGATCCGCATGAAGATCGGTGTCATGTTCGGCAACCCCGAGACCA
CCACCGGCGGCAACGCCCTCAAGTTCTACGCCTCGGTGCGCATGGACATCCGCAAGATCGCCACCCTCAAGCAGGGGGAC
GCGGTGATCGGCTCCCGCACCAAGGTCAAGGTGGTCAAGAACAAGGTGGCGCCCCCCTTCAGGGAAGTTGAGTTCGACAT
CCTCTACGGCGAGGGTATCTCCCGCACCGGCGATGTGCTTGACCTGGCGGTGGACAAGGGGATCGTCGAGAAGAGCGGCG
CCTGGTACTCCTACGGCAAGGAGCGTATCGGCCAGGGACGGGAGAACTCACGCACCTTTCTGACCGAGCATCCCGAGGTG
CTGGCGGATATCGAGGGAAAACTGATGGACCTGCTCAGGGGGCCGGCCGTTACCAACGAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (12-274)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.795	91.765	0.659
recA	Acinetobacter baylyi ADP1	68.731	95	0.653
recA	Glaesserella parasuis strain SC1401	67.273	97.059	0.653
recA	Pseudomonas stutzeri DSM 10701	68.966	93.824	0.647
recA	Neisseria gonorrhoeae MS11	67.077	95.588	0.641
recA	Neisseria gonorrhoeae MS11	67.077	95.588	0.641
recA	Neisseria gonorrhoeae strain FA1090	67.077	95.588	0.641
recA	Acinetobacter baumannii D1279779	67.183	95	0.638
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.722	92.941	0.629
recA	Helicobacter pylori strain NCTC11637	67.722	92.941	0.629
recA	Helicobacter pylori 26695	67.405	92.941	0.626
recA	Bacillus subtilis subsp. subtilis str. 168	64.242	97.059	0.624
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.174	98.235	0.621
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.724	95.882	0.621
recA	Vibrio cholerae strain A1552	64.724	95.882	0.621
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.947	99.412	0.606
recA	Streptococcus mutans UA159	63.272	95.294	0.603
recA	Latilactobacillus sakei subsp. sakei 23K	65.385	91.765	0.6
recA	Streptococcus pyogenes NZ131	62.037	95.294	0.591
recA	Streptococcus mitis SK321	61.094	96.765	0.591
recA	Streptococcus pneumoniae Rx1	61.994	94.412	0.585
recA	Streptococcus pneumoniae D39	61.994	94.412	0.585
recA	Streptococcus pneumoniae R6	61.994	94.412	0.585
recA	Streptococcus pneumoniae TIGR4	61.994	94.412	0.585
recA	Streptococcus mitis NCTC 12261	60.486	96.765	0.585
recA	Lactococcus lactis subsp. cremoris KW2	59.878	96.765	0.579