Detailed information NTG0026903

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NT01CX_RS06165
• Genome accession: NC_008593
• Coordinates: 1326104..1327156 (-)
• Length: 350 a.a.
• NCBI ID: WP_011722196.1
• Uniprot ID: A0AA88ZRS5
• Organism: Clostridium novyi NT
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1321104..1332156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NT01CX_RS06150 (NT01CX_2119)	-	1322633..1322887 (-)	255	WP_011722192.1	HPr family phosphocarrier protein	-
NT01CX_RS06155 (NT01CX_2120)	-	1322973..1324167 (-)	1195	Protein_1221	pyridoxal phosphate-dependent aminotransferase	-
NT01CX_RS06160 (NT01CX_2122)	rny	1324300..1325814 (-)	1515	WP_011722195.1	ribonuclease Y	-
NT01CX_RS06165 (NT01CX_2123)	recA	1326104..1327156 (-)	1053	WP_011722196.1	recombinase RecA	Machinery gene
NT01CX_RS06170 (NT01CX_2124)	pgsA	1327307..1327849 (-)	543	WP_011722197.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NT01CX_RS06175 (NT01CX_2125)	rimO	1327833..1329167 (-)	1335	WP_011722198.1	30S ribosomal protein S12 methylthiotransferase RimO	-
NT01CX_RS06180 (NT01CX_2126)	-	1329260..1331605 (-)	2346	WP_011722199.1	FtsK/SpoIIIE family DNA translocase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38006.48 Da
• Isoelectric Point: 6.9798

>NTDB_id=26903 NT01CX_RS06165 WP_011722196.1 1326104..1327156(-) (recA) [Clostridium novyi NT]
MNNEKMKALQAAITQIEKQFGKGSVMKLGEEHVLNVEAISTGSLSLDIALGIGGIPRGRIIEIFGPESSGKTTVALHIIA
EAQKSGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPDTGEQALEICEALVRSGAIDVIVVDSVAALVPKAEIEGEMGD
SHVGLQARLMSQALRKLTGSINKSKCATIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRKIETIKQGDEFLGSR
TRVKVVKNKVAPPFKQAEFDIMYGTGISFEGNVLDVGVDNEIIQKSGSWFSYNDTRLGQGRENVKQFLRENPSILLEVEN
KIREKHNLKTRNTADSKVTGAKDEKSKEEK

Nucleotide

• Length: 1053 bp

>NTDB_id=26903 NT01CX_RS06165 WP_011722196.1 1326104..1327156(-) (recA) [Clostridium novyi NT]
ATGAACAATGAAAAGATGAAAGCATTACAAGCTGCTATAACTCAAATAGAAAAACAATTTGGTAAAGGTTCAGTAATGAA
GCTAGGAGAAGAACATGTTCTTAATGTAGAGGCAATATCTACTGGAAGTCTTTCTTTAGATATAGCACTAGGAATTGGTG
GTATTCCTAGAGGAAGAATTATTGAAATATTCGGACCTGAATCATCAGGTAAAACAACTGTAGCACTTCATATAATCGCA
GAAGCACAAAAATCAGGTGGAACTGCAGCATTTATAGATGCAGAACATGCCCTTGACCCTGTATATGCAAAAGCATTAGG
AGTAGATATAGATAACTTAATAGTTTCTCAACCAGATACCGGGGAACAAGCTCTTGAAATATGTGAAGCATTAGTAAGAT
CTGGTGCTATAGATGTCATAGTTGTTGACTCTGTAGCAGCTTTAGTTCCAAAAGCTGAAATTGAAGGTGAAATGGGAGAC
TCACATGTAGGTCTTCAAGCAAGACTTATGTCTCAAGCTCTAAGAAAGTTAACAGGTTCAATTAATAAATCAAAATGTGC
TACTATATTCATAAATCAATTGAGAGAAAAAGTTGGAATAATGTTTGGAAATCCTGAAACAACACCAGGAGGAAGAGCGT
TAAAATTCTATTCATCTGTTAGATTAGATGTAAGAAAAATAGAAACAATAAAACAAGGTGATGAATTCTTAGGAAGCAGA
ACTAGAGTAAAAGTAGTTAAAAACAAAGTAGCACCACCATTTAAACAAGCGGAATTCGATATAATGTACGGTACAGGAAT
TTCTTTTGAAGGAAATGTGTTAGACGTTGGTGTTGATAATGAAATAATTCAAAAAAGTGGTTCTTGGTTCTCATATAATG
ATACTAGATTAGGACAAGGAAGAGAAAATGTAAAACAATTCCTAAGAGAAAATCCTAGTATATTATTAGAAGTAGAGAAT
AAAATAAGAGAAAAACATAATTTAAAAACAAGAAATACAGCGGATTCAAAAGTTACAGGTGCTAAAGACGAAAAGTCTAA
AGAAGAAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	71.166	93.143	0.663
recA	Acinetobacter baylyi ADP1	64.943	99.429	0.646
recA	Neisseria gonorrhoeae MS11	64.183	99.714	0.64
recA	Neisseria gonorrhoeae MS11	64.183	99.714	0.64
recA	Neisseria gonorrhoeae strain FA1090	64.183	99.714	0.64
recA	Acinetobacter baumannii D1279779	67.692	92.857	0.629
recA	Streptococcus mutans UA159	62.04	100	0.626
recA	Streptococcus pneumoniae D39	62.393	100	0.626
recA	Streptococcus pneumoniae Rx1	62.393	100	0.626
recA	Streptococcus pneumoniae R6	62.393	100	0.626
recA	Streptococcus pneumoniae TIGR4	62.393	100	0.626
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.269	95.429	0.623
recA	Latilactobacillus sakei subsp. sakei 23K	66.564	93.143	0.62
recA	Ralstonia pseudosolanacearum GMI1000	66.667	92.571	0.617
recA	Vibrio cholerae strain A1552	66.667	92.571	0.617
recA	Vibrio cholerae O1 biovar El Tor strain E7946	66.667	92.571	0.617
recA	Glaesserella parasuis strain SC1401	62.428	98.857	0.617
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.605	99.714	0.614
recA	Pseudomonas stutzeri DSM 10701	63.314	96.571	0.611
recA	Streptococcus mitis NCTC 12261	64.742	94	0.609
recA	Streptococcus pyogenes NZ131	64.742	94	0.609
recA	Streptococcus mitis SK321	64.438	94	0.606
recA	Lactococcus lactis subsp. cremoris KW2	63.526	94	0.597
recA	Helicobacter pylori strain NCTC11637	63.692	92.857	0.591
recA	Helicobacter pylori 26695	63.385	92.857	0.589
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.467	92.286	0.586