Detailed information NTG0026872

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SHEWANA3_RS05900
• Genome accession: NC_008577
• Coordinates: 1326397..1327470 (+)
• Length: 357 a.a.
• NCBI ID: WP_011716225.1
• Uniprot ID: A0A220UPF0
• Organism: Shewanella sp. ANA-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1321397..1332470

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SHEWANA3_RS05890 (Shewana3_1124)	rpoS	1322334..1323314 (+)	981	WP_011621912.1	RNA polymerase sigma factor RpoS	-
SHEWANA3_RS05895 (Shewana3_1125)	mutS	1323429..1326014 (-)	2586	WP_011716224.1	DNA mismatch repair protein MutS	-
SHEWANA3_RS05900 (Shewana3_1126)	recA	1326397..1327470 (+)	1074	WP_011716225.1	recombinase RecA	Machinery gene
SHEWANA3_RS05905 (Shewana3_1127)	-	1327545..1327955 (+)	411	WP_041412576.1	regulatory protein RecX	-
SHEWANA3_RS05910 (Shewana3_1128)	alaS	1328231..1330855 (+)	2625	WP_011716227.1	alanine--tRNA ligase	-
SHEWANA3_RS05915 (Shewana3_1129)	-	1330865..1332121 (+)	1257	WP_011716228.1	aspartate kinase	-
SHEWANA3_RS05920 (Shewana3_1130)	csrA	1332240..1332437 (+)	198	WP_006082602.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38144.50 Da
• Isoelectric Point: 4.8761

>NTDB_id=26872 SHEWANA3_RS05900 WP_011716225.1 1326397..1327470(+) (recA) [Shewanella sp. ANA-3]
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIAAEI
DKTLRELLLSNPSAMSSSSSDDENSEGNVDFETGEVF

Nucleotide

• Length: 1074 bp

>NTDB_id=26872 SHEWANA3_RS05900 WP_011716225.1 1326397..1327470(+) (recA) [Shewanella sp. ANA-3]
ATGAAAGTCGATCCAAACAAAGAGAAAGCACTTGCTGCGGTATTGAGCCAAATTGAAAAGCAATTTGGTAAAGGCTCCAT
CATGAAGCTGGGCGAAGACCGCTCTATGGATGTTGAGACTATTTCTACTGGTTCACTTTCCCTTGACGTCGCCTTAGGGG
CTGGCGGTTTACCAATGGGACGTATCGTTGAGATCTATGGTCCCGAATCATCAGGTAAAACGACGCTGACATTAGAAGTG
ATTGCCGCTGCTCAGCGCGAAGGTAAAACCTGTGCCTTTATCGATGCCGAGCACGCGCTAGACCCTATCTATGCTAAAAA
GTTAGGCGTAGATATCGATAACTTACTGTGTTCACAACCCGATACCGGCGAACAAGCCCTTGAGATCTGTGATGCGTTAA
CCCGTTCTGGCGCGGTAGATGTGATCATCGTTGACTCGGTTGCGGCATTAACACCCAAAGCAGAAATTGAAGGTGAAATT
GGTGACTCACACATGGGCCTAGCGGCGCGTATGATGAGCCAAGCGATGCGTAAGCTCGCGGGTAACCTCAAGCAATCGAA
TACACTATTAATCTTCATTAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACGGGCGGTA
ACGCGCTGAAGTTCTACGCTTCTGTTCGTCTCGATATTCGCCGTACTGGTGCTATCAAAGAAGGCGATGAAGTGGTGGGT
AACGAGACGCGCGTTAAAGTGGTTAAAAACAAGGTTGCCGCGCCGTTTAAACAAGCTGAGTTCCAAATTCTTTACGGTCA
AGGTATCAACCGTACTGGTGAGTTAGTCGATTTAGGTGTTGCCCATAAACTGATTGAAAAAGCCGGTGCATGGTACAGCT
ACAAGGGTGACAAGATTGGTCAAGGTCGTGCAAATGCCGGTAAATATCTGACTGAAAACCCAGCAATTGCCGCTGAAATC
GATAAAACACTGCGTGAGTTACTGCTGAGTAACCCAAGCGCTATGTCTTCATCTTCATCTGATGATGAAAACAGCGAAGG
CAATGTTGATTTCGAAACAGGCGAAGTATTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A0A220UPF0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	82.609	96.639	0.798
recA	Vibrio cholerae O1 biovar El Tor strain E7946	82.609	96.639	0.798
recA	Pseudomonas stutzeri DSM 10701	72.727	95.518	0.695
recA	Glaesserella parasuis strain SC1401	68.857	98.039	0.675
recA	Acinetobacter baumannii D1279779	70.088	95.518	0.669
recA	Acinetobacter baylyi ADP1	70.088	95.518	0.669
recA	Neisseria gonorrhoeae MS11	69.35	90.476	0.627
recA	Neisseria gonorrhoeae MS11	69.35	90.476	0.627
recA	Neisseria gonorrhoeae strain FA1090	69.35	90.476	0.627
recA	Ralstonia pseudosolanacearum GMI1000	70.794	88.235	0.625
recA	Streptococcus pneumoniae D39	63.415	91.877	0.583
recA	Streptococcus pneumoniae TIGR4	63.415	91.877	0.583
recA	Streptococcus pneumoniae R6	63.415	91.877	0.583
recA	Streptococcus pneumoniae Rx1	63.415	91.877	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.29	96.639	0.583
recA	Streptococcus mitis SK321	62.805	91.877	0.577
recA	Streptococcus mitis NCTC 12261	62.805	91.877	0.577
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.961	93.277	0.569
recA	Streptococcus pyogenes NZ131	61.585	91.877	0.566
recA	Helicobacter pylori strain NCTC11637	59.821	94.118	0.563
recA	Streptococcus mutans UA159	61.92	90.476	0.56
recA	Helicobacter pylori 26695	59.524	94.118	0.56
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	89.916	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.061	91.877	0.552
recA	Latilactobacillus sakei subsp. sakei 23K	61.442	89.356	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.27	88.235	0.541