Detailed information NTG0026746

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SFUM_RS13065
• Genome accession: NC_008554
• Coordinates: 3116822..3117853 (-)
• Length: 343 a.a.
• NCBI ID: WP_011699374.1
• Uniprot ID: A0LLA4
• Organism: Syntrophobacter fumaroxidans MPOB
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3111822..3122853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SFUM_RS13055 (Sfum_2526)	-	3112248..3113234 (-)	987	WP_011699372.1	GTPase	-
SFUM_RS13060 (Sfum_2527)	alaS	3114029..3116686 (-)	2658	WP_011699373.1	alanine--tRNA ligase	-
SFUM_RS13065 (Sfum_2528)	recA	3116822..3117853 (-)	1032	WP_011699374.1	recombinase RecA	Machinery gene
SFUM_RS13070 (Sfum_2529)	thpR	3118035..3118607 (-)	573	WP_011699375.1	RNA 2',3'-cyclic phosphodiesterase	-
SFUM_RS13075 (Sfum_2530)	-	3118582..3119856 (-)	1275	WP_011699376.1	CinA family nicotinamide mononucleotide deamidase-related protein	-
SFUM_RS13080 (Sfum_2531)	larC	3120050..3121216 (-)	1167	WP_011699377.1	nickel pincer cofactor biosynthesis protein LarC	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37090.60 Da
• Isoelectric Point: 6.3668

>NTDB_id=26746 SFUM_RS13065 WP_011699374.1 3116822..3117853(-) (recA) [Syntrophobacter fumaroxidans MPOB]
MGAVDERQRAIDTAVSQIERMCGKGAIMRLGEGAQNVEIPVISTGCLSLDLALGIGGVARGRIMEIFGPESSGKTTLALH
VVAEAQKLGGLAAFIDAEHALDVNYARKLGVQVEDLLISQPDYGEQALEIAEILVRSNAIDVIVVDSVAALVPKAEIEGE
MGDPHVGLQARLMSQALRKLVSSISKSRTCVIFINQIRMKIGVMYGSPETTTGGNALKFYATMRLDIRRVGPIKDGQEVV
GNRTRVKVVKNKIAPPFREVEFDVVYGRGISREGDILDLAVESGAIEKSGTWYSYSGERLGQGRENAKNFLREHPDLLGE
LERKLREAHNLRFSPGPVTGAGE

Nucleotide

• Length: 1032 bp

>NTDB_id=26746 SFUM_RS13065 WP_011699374.1 3116822..3117853(-) (recA) [Syntrophobacter fumaroxidans MPOB]
ATGGGAGCTGTTGACGAGCGTCAGAGGGCCATCGACACGGCGGTGTCTCAAATCGAGCGCATGTGCGGCAAGGGCGCGAT
CATGCGGCTGGGCGAAGGCGCGCAGAACGTGGAAATTCCCGTGATATCCACCGGCTGCCTGTCACTCGACCTTGCCCTGG
GAATCGGCGGGGTGGCTCGAGGCCGGATCATGGAAATTTTCGGGCCGGAATCCTCCGGCAAGACCACCCTGGCGCTTCAC
GTGGTCGCCGAAGCCCAGAAACTGGGCGGGCTGGCCGCGTTCATCGATGCCGAGCACGCCCTGGACGTCAACTATGCCCG
CAAGCTGGGAGTCCAGGTGGAGGATCTCCTGATCAGCCAGCCCGACTACGGCGAGCAGGCCCTGGAGATCGCCGAAATCC
TGGTGCGCAGCAATGCCATCGACGTCATCGTGGTGGATTCGGTGGCGGCACTCGTTCCCAAGGCGGAAATCGAAGGGGAG
ATGGGCGATCCCCATGTGGGGCTGCAGGCAAGGCTCATGAGCCAGGCTTTGCGCAAGCTCGTGTCCAGCATCAGCAAGTC
CCGCACGTGCGTCATCTTCATCAACCAGATCCGGATGAAAATCGGGGTCATGTACGGGTCTCCGGAAACCACCACCGGCG
GGAACGCGTTGAAGTTTTACGCCACCATGCGGCTGGATATCCGCCGGGTGGGCCCCATCAAGGACGGACAGGAAGTGGTC
GGGAACCGCACCCGCGTTAAGGTGGTGAAGAACAAGATCGCGCCTCCCTTCCGGGAGGTCGAGTTCGACGTGGTGTACGG
GCGCGGGATTTCCAGGGAAGGGGATATTCTCGACCTTGCCGTCGAATCCGGGGCCATTGAAAAGTCGGGCACCTGGTATT
CCTACAGCGGGGAGAGGCTCGGGCAGGGCCGCGAGAACGCCAAGAATTTCCTCAGGGAGCACCCCGACCTGCTGGGTGAG
CTGGAACGGAAGCTGCGCGAGGCCCACAATTTGAGGTTTTCACCCGGCCCGGTGACCGGGGCGGGGGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

3D structure

• AlphaFold DB: A0LLA4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	69.113	95.335	0.659
recA	Pseudomonas stutzeri DSM 10701	65.839	93.878	0.618
recA	Helicobacter pylori strain NCTC11637	61.947	98.834	0.612
recA	Helicobacter pylori 26695	61.947	98.834	0.612
recA	Neisseria gonorrhoeae strain FA1090	65.217	93.878	0.612
recA	Neisseria gonorrhoeae MS11	65.217	93.878	0.612
recA	Neisseria gonorrhoeae MS11	65.217	93.878	0.612
recA	Bacillus subtilis subsp. subtilis str. 168	63.72	95.627	0.609
recA	Glaesserella parasuis strain SC1401	61.721	98.251	0.606
recA	Latilactobacillus sakei subsp. sakei 23K	61.862	97.085	0.601
recA	Vibrio cholerae strain A1552	62.848	94.169	0.592
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.848	94.169	0.592
recA	Acinetobacter baylyi ADP1	62.654	94.461	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.963	95.044	0.589
recA	Acinetobacter baumannii D1279779	62.037	94.461	0.586
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.28	95.627	0.586
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.3	94.169	0.577
recA	Lactococcus lactis subsp. cremoris KW2	58.485	96.21	0.563
recA	Streptococcus pneumoniae Rx1	58.485	96.21	0.563
recA	Streptococcus pneumoniae D39	58.485	96.21	0.563
recA	Streptococcus pneumoniae R6	58.485	96.21	0.563
recA	Streptococcus pneumoniae TIGR4	58.485	96.21	0.563
recA	Streptococcus pyogenes NZ131	58.896	95.044	0.56
recA	Streptococcus mutans UA159	58.006	96.501	0.56
recA	Streptococcus mitis SK321	58.154	94.752	0.551
recA	Streptococcus mitis NCTC 12261	58.154	94.752	0.551