Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CXW77_RS11570 | Genome accession | NZ_CP025910 |
| Coordinates | 2366042..2367103 (+) | Length | 353 a.a. |
| NCBI ID | WP_000963143.1 | Uniprot ID | A0AAV3H3S5 |
| Organism | Escherichia coli strain 204446 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2301155..2369109 | 2366042..2367103 | within | 0 |
Gene organization within MGE regions
Location: 2301155..2369109
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW77_RS11245 | - | 2301932..2302339 (-) | 408 | WP_001208072.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| CXW77_RS11250 | - | 2302486..2303079 (+) | 594 | WP_000767718.1 | non-oxidative hydroxyarylic acid decarboxylases subunit B | - |
| CXW77_RS11255 | - | 2303079..2304506 (+) | 1428 | WP_000863235.1 | non-oxidative hydroxyarylic acid decarboxylases subunit C | - |
| CXW77_RS11260 | - | 2304517..2304753 (+) | 237 | WP_000562984.1 | non-oxidative hydroxyarylic acid decarboxylases subunit D | - |
| CXW77_RS11265 | ygbN | 2304792..2306156 (-) | 1365 | WP_000104439.1 | GntP family transporter | - |
| CXW77_RS11270 | ygbM | 2306245..2307021 (-) | 777 | WP_001136918.1 | HPr family phosphocarrier protein | - |
| CXW77_RS11275 | ygbL | 2307026..2307664 (-) | 639 | WP_001278994.1 | aldolase | - |
| CXW77_RS11280 | otnK | 2307661..2308923 (-) | 1263 | WP_000590392.1 | 3-oxo-tetronate kinase | - |
| CXW77_RS11285 | ltnD | 2308920..2309828 (-) | 909 | WP_000847985.1 | L-threonate dehydrogenase | - |
| CXW77_RS11290 | ygbI | 2310024..2310791 (+) | 768 | WP_001297141.1 | DNA-binding transcriptional repressor YgbI | - |
| CXW77_RS11295 | pphB | 2310842..2311498 (-) | 657 | WP_001141330.1 | protein-serine/threonine phosphatase | - |
| CXW77_RS11300 | mutS | 2311604..2314171 (-) | 2568 | WP_001554745.1 | DNA mismatch repair protein MutS | - |
| CXW77_RS11305 | - | 2314331..2315791 (+) | 1461 | WP_001399294.1 | tyrosine-type recombinase/integrase | - |
| CXW77_RS11310 | - | 2315795..2316394 (+) | 600 | WP_000117646.1 | hypothetical protein | - |
| CXW77_RS11315 | - | 2316461..2317135 (+) | 675 | WP_001553347.1 | hypothetical protein | - |
| CXW77_RS11320 | - | 2317308..2317862 (+) | 555 | WP_227632912.1 | hypothetical protein | - |
| CXW77_RS27575 | - | 2318021..2318587 (-) | 567 | WP_000724430.1 | hypothetical protein | - |
| CXW77_RS11330 | - | 2319002..2320207 (+) | 1206 | WP_001399291.1 | tyrosine-type recombinase/integrase | - |
| CXW77_RS11335 | - | 2320194..2321696 (+) | 1503 | WP_000700768.1 | site-specific integrase | - |
| CXW77_RS11340 | - | 2321693..2323663 (+) | 1971 | WP_000186191.1 | hypothetical protein | - |
| CXW77_RS11345 | - | 2323644..2324063 (+) | 420 | WP_000038766.1 | hypothetical protein | - |
| CXW77_RS11350 | - | 2324254..2324673 (+) | 420 | WP_000413443.1 | hypothetical protein | - |
| CXW77_RS11355 | - | 2324725..2325303 (-) | 579 | WP_000873312.1 | DUF4755 domain-containing protein | - |
| CXW77_RS11360 | - | 2325543..2326676 (-) | 1134 | WP_001399289.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CXW77_RS11365 | - | 2326682..2327047 (-) | 366 | WP_000361735.1 | hypothetical protein | - |
| CXW77_RS11370 | - | 2327266..2328351 (-) | 1086 | WP_000186253.1 | hypothetical protein | - |
| CXW77_RS11375 | - | 2328377..2329525 (-) | 1149 | WP_001037485.1 | UvrD-helicase domain-containing protein | - |
| CXW77_RS11380 | - | 2329518..2331164 (-) | 1647 | WP_000695116.1 | ATP-dependent nuclease | - |
| CXW77_RS11385 | - | 2331551..2331730 (+) | 180 | WP_000611928.1 | hypothetical protein | - |
| CXW77_RS11390 | ygbA | 2331762..2332115 (+) | 354 | WP_000015498.1 | nitrous oxide-stimulated promoter family protein | - |
| CXW77_RS11395 | flhA | 2332152..2334230 (-) | 2079 | WP_001352563.1 | formate hydrogenlyase transcriptional activator FlhA | - |
| CXW77_RS11400 | hypE | 2334304..2335314 (-) | 1011 | WP_001059968.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| CXW77_RS11405 | hypD | 2335311..2336432 (-) | 1122 | WP_001212982.1 | hydrogenase formation protein HypD | - |
| CXW77_RS11410 | hypC | 2336432..2336704 (-) | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| CXW77_RS11415 | hypB | 2336695..2337567 (-) | 873 | WP_000337668.1 | hydrogenase nickel incorporation protein HypB | - |
| CXW77_RS11420 | hypA | 2337571..2337921 (-) | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CXW77_RS11430 | hycA | 2338133..2338594 (+) | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| CXW77_RS11435 | hycB | 2338719..2339330 (+) | 612 | WP_001079181.1 | formate hydrogenlyase subunit HycB | - |
| CXW77_RS11440 | hycC | 2339327..2341153 (+) | 1827 | WP_001274375.1 | formate hydrogenlyase subunit 3 | - |
| CXW77_RS11445 | hycD | 2341156..2342079 (+) | 924 | WP_000115199.1 | formate hydrogenlyase subunit HycD | - |
| CXW77_RS11450 | hycE | 2342097..2343806 (+) | 1710 | WP_001288134.1 | formate hydrogenlyase subunit HycE | - |
| CXW77_RS11455 | hycF | 2343816..2344358 (+) | 543 | WP_000493792.1 | formate hydrogenlyase subunit HycF | - |
| CXW77_RS11460 | hycG | 2344358..2345125 (+) | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| CXW77_RS11465 | hycH | 2345122..2345532 (+) | 411 | WP_001291921.1 | formate hydrogenlyase assembly protein HycH | - |
| CXW77_RS11470 | hycI | 2345525..2345995 (+) | 471 | WP_000132962.1 | hydrogenase maturation peptidase HycI | - |
| CXW77_RS11475 | - | 2346038..2346793 (+) | 756 | WP_001355856.1 | hypothetical protein | - |
| CXW77_RS11480 | - | 2346864..2347283 (+) | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | - |
| CXW77_RS11485 | ascB | 2347397..2348821 (-) | 1425 | WP_000110316.1 | 6-phospho-beta-glucosidase AscB | - |
| CXW77_RS11490 | ascF | 2348830..2350287 (-) | 1458 | WP_001107872.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| CXW77_RS11495 | ascG | 2350547..2351557 (+) | 1011 | WP_001363554.1 | DNA-binding transcriptional regulator AscG | - |
| CXW77_RS11500 | hydN | 2351706..2352233 (+) | 528 | WP_001078777.1 | electron transport protein HydN | - |
| CXW77_RS11505 | hypF | 2352386..2354638 (+) | 2253 | WP_001107679.1 | carbamoyltransferase HypF | - |
| CXW77_RS11510 | norW | 2354766..2355899 (-) | 1134 | WP_000064745.1 | NADH:flavorubredoxin reductase NorW | - |
| CXW77_RS11515 | norV | 2355896..2357335 (-) | 1440 | WP_000029622.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| CXW77_RS11520 | norR | 2357522..2359036 (+) | 1515 | WP_000010777.1 | nitric oxide reductase transcriptional regulator NorR | - |
| CXW77_RS11525 | gutQ | 2359033..2359998 (-) | 966 | WP_001287420.1 | arabinose-5-phosphate isomerase GutQ | - |
| CXW77_RS11530 | srlR | 2359991..2360764 (-) | 774 | WP_000804546.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| CXW77_RS11535 | gutM | 2360831..2361190 (-) | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| CXW77_RS11540 | srlD | 2361295..2362074 (-) | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| CXW77_RS11545 | srlB | 2362078..2362449 (-) | 372 | WP_000216210.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| CXW77_RS11550 | srlE | 2362460..2363419 (-) | 960 | WP_000148875.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| CXW77_RS11555 | srlA | 2363416..2363979 (-) | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| CXW77_RS11560 | mltB | 2364235..2365320 (+) | 1086 | WP_001299653.1 | lytic murein transglycosylase B | - |
| CXW77_RS11565 | pncC | 2365465..2365962 (+) | 498 | WP_001355854.1 | nicotinamide-nucleotide amidase | - |
| CXW77_RS11570 | recA | 2366042..2367103 (+) | 1062 | WP_000963143.1 | recombinase RecA | Machinery gene |
| CXW77_RS11575 | recX | 2367346..2367846 (+) | 501 | WP_000140506.1 | recombination regulator RecX | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 37973.37 Da Isoelectric Point: 4.8171
>NTDB_id=264416 CXW77_RS11570 WP_000963143.1 2366042..2367103(+) (recA) [Escherichia coli strain 204446]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
Nucleotide
Download Length: 1062 bp
>NTDB_id=264416 CXW77_RS11570 WP_000963143.1 2366042..2367103(+) (recA) [Escherichia coli strain 204446]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCTTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTACCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGATAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCACCGTTTAAACAGGCTGAATTTCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCAACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCTTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTACCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGATAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCACCGTTTAAACAGGCTGAATTTCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCAACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.