Detailed information NTG0026224

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: TERY_RS12885
• Genome accession: NC_008312
• Coordinates: 4169525..4170607 (+)
• Length: 360 a.a.
• NCBI ID: WP_011612246.1
• Uniprot ID: Q111E0
• Organism: Trichodesmium erythraeum IMS101
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4164525..4175607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TERY_RS12875 (Tery_2693)	crtB	4165263..4166156 (-)	894	WP_011612244.1	cyanoexosortase B	-
TERY_RS12880 (Tery_2694)	-	4166810..4167943 (-)	1134	WP_011612245.1	DegT/DnrJ/EryC1/StrS family aminotransferase	-
TERY_RS12885 (Tery_2695)	recA	4169525..4170607 (+)	1083	WP_011612246.1	recombinase RecA	Machinery gene
TERY_RS12890 (Tery_2696)	-	4170843..4171718 (-)	876	WP_011612247.1	alpha/beta fold hydrolase	-
TERY_RS12895 (Tery_2697)	-	4172628..4172993 (-)	366	WP_011612248.1	DUF1815 family protein	-
TERY_RS12900 (Tery_2698)	-	4173786..4173998 (-)	213	WP_011612249.1	DUF2839 family protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 38723.00 Da
• Isoelectric Point: 5.0880

>NTDB_id=26224 TERY_RS12885 WP_011612246.1 4169525..4170607(+) (recA) [Trichodesmium erythraeum IMS101]
MASATDNKEKQKALDSVLKTIEKTFGKGSIVRLGDATRMKVETISSGALTLDLALGGGLPKGRVIEIYGPESSGKTTLAL
HAIAETQKSGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMALEVVDHLVRSVAVDIVVVDSVAALVPRAEIEG
DMGDSHMGLQARLMSQALRKITGNIGKSGCTVVFLNQLRQKIGVVYGNPETTTGGNALKFYASVRLDIRRTQTLKKSSEE
YGIHAKVKVAKNKVAPPFRVAEFDIIFGKGISNVGCIIDLAEETDVIKRKGAWYSYQGSNFAQGREKAIAYMESNIDFAK
KIEKQVRDHLSQGALVSANSVARVDEIEEDEDEDEALEEE

Nucleotide

• Length: 1083 bp

>NTDB_id=26224 TERY_RS12885 WP_011612246.1 4169525..4170607(+) (recA) [Trichodesmium erythraeum IMS101]
ATGGCTTCAGCTACAGATAACAAAGAAAAACAAAAAGCTTTAGATTCAGTCCTCAAAACCATAGAAAAAACTTTTGGTAA
AGGGTCAATTGTCCGTTTGGGAGATGCTACCCGCATGAAGGTAGAAACAATCTCGAGTGGCGCACTTACCTTAGATTTGG
CATTAGGAGGTGGCTTACCCAAGGGCAGAGTTATTGAAATTTACGGACCAGAAAGTTCTGGAAAAACGACTCTAGCATTA
CATGCGATCGCCGAAACTCAGAAAAGTGGTGGTATAGCAGCTTTTGTAGATGCAGAACACGCTCTAGACCCTACTTATGC
TGCTGCATTAGGAGTAGATATTGAAAATTTATTGGTCTCTCAACCTGATACTGGAGAGATGGCCTTAGAAGTAGTGGATC
ATCTTGTTCGTTCTGTAGCTGTTGATATTGTGGTTGTTGACTCGGTAGCAGCGTTAGTACCTAGAGCTGAAATTGAGGGA
GATATGGGAGATTCTCACATGGGTCTCCAAGCTCGTTTAATGAGTCAAGCACTACGGAAAATTACAGGAAATATTGGTAA
ATCAGGTTGTACAGTAGTTTTCCTCAACCAACTTCGCCAAAAGATAGGTGTTGTTTATGGTAATCCAGAAACTACTACTG
GTGGTAATGCTCTTAAATTTTATGCTTCGGTTAGACTTGATATTCGTCGCACACAAACTCTCAAGAAATCTTCAGAGGAA
TATGGTATTCATGCTAAGGTCAAAGTTGCTAAGAATAAGGTCGCTCCTCCATTCCGCGTAGCTGAATTTGATATTATTTT
TGGTAAAGGAATTTCTAATGTCGGCTGTATTATTGACTTAGCCGAAGAGACAGATGTAATTAAACGTAAAGGTGCTTGGT
ATAGTTACCAAGGAAGTAATTTTGCTCAAGGTCGAGAAAAAGCTATTGCTTATATGGAATCTAATATTGACTTTGCCAAA
AAAATTGAAAAGCAAGTTCGAGATCATTTAAGTCAAGGTGCTTTGGTTTCTGCTAATTCTGTGGCACGGGTTGATGAGAT
AGAAGAGGATGAAGATGAGGATGAAGCTCTAGAAGAAGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (12-272)

3D structure

• AlphaFold DB: Q111E0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baumannii D1279779	61.19	98.056	0.6
recA	Acinetobacter baylyi ADP1	61.628	95.556	0.589
recA	Pseudomonas stutzeri DSM 10701	61.128	93.611	0.572
recA	Glaesserella parasuis strain SC1401	57.865	98.889	0.572
recA	Streptococcus pneumoniae R6	57.103	99.722	0.569
recA	Streptococcus pneumoniae Rx1	57.103	99.722	0.569
recA	Streptococcus pneumoniae D39	57.103	99.722	0.569
recA	Streptococcus pneumoniae TIGR4	57.103	99.722	0.569
recA	Bacillus subtilis subsp. subtilis str. 168	63.043	89.444	0.564
recA	Ralstonia pseudosolanacearum GMI1000	61.027	91.944	0.561
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60	93.056	0.558
recA	Helicobacter pylori strain NCTC11637	61.35	90.556	0.556
recA	Helicobacter pylori 26695	61.35	90.556	0.556
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.637	96.389	0.556
recA	Streptococcus mitis SK321	56.818	97.778	0.556
recA	Neisseria gonorrhoeae MS11	61.371	89.167	0.547
recA	Neisseria gonorrhoeae MS11	61.371	89.167	0.547
recA	Neisseria gonorrhoeae strain FA1090	61.371	89.167	0.547
recA	Vibrio cholerae strain A1552	60	90.278	0.542
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60	90.278	0.542
recA	Streptococcus mutans UA159	55.429	97.222	0.539
recA	Streptococcus mitis NCTC 12261	59.877	90	0.539
recA	Latilactobacillus sakei subsp. sakei 23K	60.312	88.889	0.536
recA	Streptococcus pyogenes NZ131	59.259	90	0.533
recA	Lactococcus lactis subsp. cremoris KW2	57.716	90	0.519
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.024	92.222	0.517