Detailed information NTG0025930

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SALA_RS08775
• Genome accession: NC_008048
• Coordinates: 1814454..1815536 (-)
• Length: 360 a.a.
• NCBI ID: WP_011542018.1
• Uniprot ID: Q1GSD4
• Organism: Sphingopyxis alaskensis RB2256
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1809454..1820536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALA_RS08760 (Sala_1721)	-	1811903..1812478 (-)	576	WP_011542014.1	hypothetical protein	-
SALA_RS08765 (Sala_1722)	-	1812468..1813094 (-)	627	WP_011542015.1	glutathione S-transferase family protein	-
SALA_RS08770 (Sala_1723)	-	1813120..1813935 (-)	816	WP_011542016.1	agmatinase family protein	-
SALA_RS17640 (Sala_1724)	-	1814021..1814278 (-)	258	WP_084764814.1	hypothetical protein	-
SALA_RS08775 (Sala_1725)	recA	1814454..1815536 (-)	1083	WP_011542018.1	recombinase RecA	Machinery gene
SALA_RS08780 (Sala_1726)	-	1815689..1816036 (-)	348	WP_011542019.1	response regulator	-
SALA_RS08785 (Sala_1727)	-	1816029..1818410 (-)	2382	WP_011542020.1	hybrid sensor histidine kinase/response regulator	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 38286.90 Da
• Isoelectric Point: 5.3258

>NTDB_id=25930 SALA_RS08775 WP_011542018.1 1814454..1815536(-) (recA) [Sphingopyxis alaskensis RB2256]
MAGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGLDIALGVGGLPRGRVIEIYGP
ESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGRENAKT
FLKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI

Nucleotide

• Length: 1083 bp

>NTDB_id=25930 SALA_RS08775 WP_011542018.1 1814454..1815536(-) (recA) [Sphingopyxis alaskensis RB2256]
ATGGCCGGACAATTGTCACTCGTCGAATCGGGGAAAGCAGTGAACGGAACGGACAGGCAGAAGGCGCTCGACGCCGCATT
GGCGCAGATCGACCGCGCCTTCGGCAAGGGCTCGGTGATGAAGCTGGGTTCGAAGGAAGCGATGCAGGTCGAGGCGGTCT
CGACCGGGTCGCTCGGGCTCGACATCGCGCTGGGCGTGGGCGGTCTGCCGCGCGGGCGCGTCATCGAAATCTATGGTCCC
GAAAGTTCGGGCAAGACAACGCTCGCGCTGCATTGCATCGCCGAAGCGCAGAAGATAGGCGGCACGGCGGCGTTCGTCGA
TGCCGAACATGCCCTCGATCCCGTCTATGCGCGCAAGCTGGGCGTCGATATCGACGAACTCATCGTGTCGCAGCCCGACA
CGGGCGAGCAGGCGCTCGAAATCGTCGACACGCTCGTCCGCTCGAACGCGATCGACGTGCTCGTCGTCGACTCGGTTGCC
GCGCTCGTCCCGCGCGCCGAGATTGAGGGCGAGATGGGCGACAGCCATGTCGGGCTGCAGGCGCGGTTGATGTCGCAGAG
CTTGCGCAAGCTCACCGGGTCGATCAGCCGTTCGCGCTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAAATCGGCG
TGATGTATGGCAACCCCGAAACCACGACCGGCGGCAACGCGCTCAAATTCTATGCCTCGGTCCGCCTCGACATCCGCCGC
ACCGGACAGATCAAGAATGGCGATGAGATCGTCGGCAACACCACGCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCC
GTTCAAGCAGGTCGAGTTCGACATCATGTATGGGCAGGGCATCTCGAAGATCGGCGAAATCCTCGACATCGGCGTCAAGG
CCGGGCTGGTCGAGAAGTCGGGCGCCTGGTTCAGCTATGATTCGATCCGCATCGGGCAGGGCCGCGAAAATGCCAAGACC
TTCCTTAAGGAAAATCCAGAATTGATGGGCCGGCTCGAGGCCGCGATCCGTGGCCGCACCGACGCGGTCGCCGAAGAAAT
GATGGCGGGCCCCGACGACGACGTCGGTGGCGACGCCATCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-282)

3D structure

• AlphaFold DB: Q1GSD4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	67.251	95	0.639
recA	Neisseria gonorrhoeae strain FA1090	67.251	95	0.639
recA	Neisseria gonorrhoeae MS11	67.251	95	0.639
recA	Vibrio cholerae strain A1552	67.857	93.333	0.633
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.857	93.333	0.633
recA	Pseudomonas stutzeri DSM 10701	67.964	92.778	0.631
recA	Glaesserella parasuis strain SC1401	69.325	90.556	0.628
recA	Acinetobacter baylyi ADP1	66.369	93.333	0.619
recA	Acinetobacter baumannii D1279779	68.75	88.889	0.611
recA	Ralstonia pseudosolanacearum GMI1000	71.104	85.556	0.608
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.559	91.944	0.603
recA	Bacillus subtilis subsp. subtilis str. 168	67.601	89.167	0.603
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.529	94.444	0.6
recA	Latilactobacillus sakei subsp. sakei 23K	61.877	94.722	0.586
recA	Helicobacter pylori strain NCTC11637	62.611	93.611	0.586
recA	Helicobacter pylori 26695	62.315	93.611	0.583
recA	Streptococcus pyogenes NZ131	60.117	94.722	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.702	91.389	0.564
recA	Streptococcus pneumoniae R6	61.89	91.111	0.564
recA	Streptococcus pneumoniae TIGR4	61.89	91.111	0.564
recA	Streptococcus pneumoniae Rx1	61.89	91.111	0.564
recA	Streptococcus pneumoniae D39	61.89	91.111	0.564
recA	Streptococcus mitis SK321	61.963	90.556	0.561
recA	Streptococcus mitis NCTC 12261	61.963	90.556	0.561
recA	Streptococcus mutans UA159	58.944	94.722	0.558
recA	Lactococcus lactis subsp. cremoris KW2	59.509	90.556	0.539