Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CWQ23_RS10070 | Genome accession | NZ_CP025026 |
| Coordinates | 1911834..1912973 (-) | Length | 379 a.a. |
| NCBI ID | WP_017647882.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain SGEHI2015-113 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1910889..1951516 | 1911834..1912973 | within | 0 |
Gene organization within MGE regions
Location: 1910889..1951516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWQ23_RS10065 (CWQ23_10065) | spx | 1911220..1911618 (-) | 399 | WP_000591161.1 | transcriptional regulator Spx | - |
| CWQ23_RS10070 (CWQ23_10070) | recA | 1911834..1912973 (-) | 1140 | WP_017647882.1 | recombinase RecA | Machinery gene |
| CWQ23_RS10075 (CWQ23_10075) | cinA | 1913047..1914306 (-) | 1260 | WP_001200975.1 | competence/damage-inducible protein A | Machinery gene |
| CWQ23_RS10080 (CWQ23_10080) | - | 1914395..1914946 (-) | 552 | WP_000817341.1 | DNA-3-methyladenine glycosylase I | - |
| CWQ23_RS10085 (CWQ23_10085) | ruvA | 1914969..1915559 (-) | 591 | WP_000272490.1 | Holliday junction branch migration protein RuvA | - |
| CWQ23_RS10090 (CWQ23_10090) | - | 1915561..1916793 (-) | 1233 | WP_000657472.1 | MFS transporter | - |
| CWQ23_RS10095 (CWQ23_10095) | mutL | 1916825..1918798 (-) | 1974 | WP_000034614.1 | DNA mismatch repair endonuclease MutL | - |
| CWQ23_RS10105 (CWQ23_10105) | - | 1919024..1919227 (+) | 204 | WP_000191849.1 | cold shock domain-containing protein | - |
| CWQ23_RS10110 (CWQ23_10110) | mutS | 1919284..1921860 (-) | 2577 | WP_001118379.1 | DNA mismatch repair protein MutS | - |
| CWQ23_RS10115 (CWQ23_10115) | argR | 1921917..1922354 (-) | 438 | WP_001033152.1 | arginine repressor | - |
| CWQ23_RS10120 (CWQ23_10120) | argS | 1922576..1924267 (+) | 1692 | WP_000379864.1 | arginine--tRNA ligase | - |
| CWQ23_RS10125 (CWQ23_10125) | - | 1924355..1924663 (+) | 309 | WP_001138859.1 | bacteriocin immunity protein | - |
| CWQ23_RS10130 (CWQ23_10130) | - | 1924690..1925562 (-) | 873 | WP_000915478.1 | YitT family protein | - |
| CWQ23_RS10135 (CWQ23_10135) | - | 1925670..1926614 (-) | 945 | WP_000857770.1 | YitT family protein | - |
| CWQ23_RS10140 (CWQ23_10140) | aspS | 1926604..1928355 (-) | 1752 | WP_000830938.1 | aspartate--tRNA ligase | - |
| CWQ23_RS10145 (CWQ23_10145) | hisS | 1928448..1929728 (-) | 1281 | WP_000775906.1 | histidine--tRNA ligase | - |
| CWQ23_RS10150 (CWQ23_10150) | rpmF | 1929948..1930130 (+) | 183 | WP_000290414.1 | 50S ribosomal protein L32 | - |
| CWQ23_RS10155 (CWQ23_10155) | rpmG | 1930146..1930295 (+) | 150 | WP_001265622.1 | 50S ribosomal protein L33 | - |
| CWQ23_RS10160 (CWQ23_10160) | - | 1930576..1931037 (-) | 462 | WP_000852726.1 | hypothetical protein | - |
| CWQ23_RS10165 (CWQ23_10165) | - | 1931042..1933912 (-) | 2871 | WP_017647881.1 | SEC10/PgrA surface exclusion domain-containing protein | - |
| CWQ23_RS10170 (CWQ23_10170) | xtgS | 1934055..1934390 (+) | 336 | WP_000661406.1 | XRE family transcriptional regulator XtgS | - |
| CWQ23_RS10175 (CWQ23_10175) | - | 1934427..1935383 (-) | 957 | WP_017647880.1 | hypothetical protein | - |
| CWQ23_RS10180 (CWQ23_10180) | - | 1935618..1935911 (+) | 294 | WP_000458739.1 | hypothetical protein | - |
| CWQ23_RS10185 (CWQ23_10185) | - | 1935993..1936433 (+) | 441 | WP_000190889.1 | hypothetical protein | - |
| CWQ23_RS10190 (CWQ23_10190) | - | 1936430..1936960 (+) | 531 | WP_000614740.1 | hypothetical protein | - |
| CWQ23_RS10195 (CWQ23_10195) | - | 1936960..1937706 (+) | 747 | WP_000027783.1 | FtsK/SpoIIIE domain-containing protein | - |
| CWQ23_RS10200 (CWQ23_10200) | - | 1937870..1939141 (+) | 1272 | WP_017647879.1 | replication protein RepA | - |
| CWQ23_RS10205 (CWQ23_10205) | - | 1939224..1939487 (+) | 264 | WP_000097743.1 | MerR family transcriptional regulator | - |
| CWQ23_RS10210 (CWQ23_10210) | - | 1939584..1940849 (+) | 1266 | WP_001019353.1 | site-specific integrase | - |
| CWQ23_RS10990 (CWQ23_10215) | - | 1941054..1941239 (-) | 186 | WP_075316629.1 | FanG protein | - |
| CWQ23_RS10220 (CWQ23_10220) | - | 1941268..1941882 (+) | 615 | WP_000615736.1 | CadD family cadmium resistance transporter | - |
| CWQ23_RS10225 (CWQ23_10225) | cadX | 1941894..1942232 (+) | 339 | WP_000711079.1 | Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX | - |
| CWQ23_RS10230 (CWQ23_10230) | - | 1942283..1943698 (+) | 1416 | WP_000667636.1 | helix-turn-helix transcriptional regulator | - |
| CWQ23_RS10235 (CWQ23_10235) | - | 1944019..1944468 (+) | 450 | WP_000066889.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| CWQ23_RS10240 (CWQ23_10240) | - | 1944671..1944991 (+) | 321 | WP_000874694.1 | hypothetical protein | - |
| CWQ23_RS10245 (CWQ23_10245) | - | 1944991..1946091 (+) | 1101 | WP_000203865.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CWQ23_RS10250 (CWQ23_10250) | - | 1946088..1946693 (+) | 606 | WP_000182709.1 | hypothetical protein | - |
| CWQ23_RS10255 (CWQ23_10255) | - | 1946899..1947504 (+) | 606 | WP_001040935.1 | replication protein | - |
| CWQ23_RS10260 (CWQ23_10260) | - | 1947497..1947745 (+) | 249 | WP_001058391.1 | MerR family transcriptional regulator | - |
| CWQ23_RS10265 (CWQ23_10265) | - | 1947835..1948622 (+) | 788 | Protein_1886 | site-specific integrase | - |
| CWQ23_RS10270 (CWQ23_10270) | - | 1948659..1949464 (+) | 806 | WP_088181596.1 | IS5-like element IS1381A family transposase | - |
| CWQ23_RS10275 (CWQ23_10275) | - | 1949481..1949951 (+) | 471 | Protein_1888 | site-specific integrase | - |
| CWQ23_RS10280 (CWQ23_10280) | - | 1950310..1950981 (+) | 672 | WP_000186296.1 | PepSY domain-containing protein | - |
Sequence
Protein
Download Length: 379 a.a. Molecular weight: 40916.50 Da Isoelectric Point: 5.2446
>NTDB_id=257302 CWQ23_RS10070 WP_017647882.1 1911834..1912973(-) (recA) [Streptococcus agalactiae strain SGEHI2015-113]
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVKEKNEADDLVLDLDNAIEIEE
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVKEKNEADDLVLDLDNAIEIEE
Nucleotide
Download Length: 1140 bp
>NTDB_id=257302 CWQ23_RS10070 WP_017647882.1 1911834..1912973(-) (recA) [Streptococcus agalactiae strain SGEHI2015-113]
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTCTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGCTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGGACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTAAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTCTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGCTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGGACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTAAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.