Detailed information NTG0256846

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CV760_RS06350
• Genome accession: NZ_CP024959
• Coordinates: 1438639..1439781 (-)
• Length: 380 a.a.
• NCBI ID: WP_003810592.1
• Uniprot ID: A0A087DQC8
• Organism: Bifidobacterium adolescentis strain P2P3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1433639..1444781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV760_RS06335 (CV760_06345)	raiA	1436656..1437318 (-)	663	WP_003810589.1	ribosome-associated translation inhibitor RaiA	-
CV760_RS06345 (CV760_06355)	-	1437940..1438635 (-)	696	WP_124917259.1	regulatory protein RecX	-
CV760_RS06350 (CV760_06360)	recA	1438639..1439781 (-)	1143	WP_003810592.1	recombinase RecA	Machinery gene
CV760_RS06355 (CV760_06365)	-	1440044..1440277 (-)	234	WP_033499690.1	DUF3046 domain-containing protein	-
CV760_RS06360 (CV760_06370)	-	1440360..1440869 (-)	510	WP_124917260.1	helix-turn-helix transcriptional regulator	-
CV760_RS06365 (CV760_06375)	-	1440932..1441498 (-)	567	WP_033499691.1	CinA family protein	-
CV760_RS06370 (CV760_06380)	pgsA	1441505..1442179 (-)	675	WP_011743385.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40228.64 Da
• Isoelectric Point: 5.3563

>NTDB_id=256846 CV760_RS06350 WP_003810592.1 1438639..1439781(-) (recA) [Bifidobacterium adolescentis strain P2P3]
MAQTSAAKNAAQNKSANGIDPRRQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVE
IYGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVI
DSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRM
DIRRIQTIKNGDEAVGNRTKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANVVKKSGSWFTYEGDQLGQGRE
NVRQFLKDNPELTEEIENKVKAAFGLIKPTDQFAEDDGAEDAAGAPDDGKTSKTSKAAKA

Nucleotide

• Length: 1143 bp

>NTDB_id=256846 CV760_RS06350 WP_003810592.1 1438639..1439781(-) (recA) [Bifidobacterium adolescentis strain P2P3]
ATGGCACAGACGAGCGCGGCAAAGAACGCCGCACAGAACAAGTCCGCGAATGGAATCGATCCGCGCCGTCAGGCCGCGCT
CGACACAGCGCTCGCGCAGGTCGAGAAAAGCTTCGGCAAGGGATCGGCCATGAGACTTGGCGACCGCCCGGAACAGGATG
TCGAGGTCATTCCGACCGGATCCTTGGCTTTGGATATGGCATTAGGCATCGGCGGCCTGCCTAAAGGCCGTATTGTGGAG
ATTTACGGACCGGAATCCTCTGGTAAGACCACATTGGCGCTGCATGTGGTGGCCAATGCCCAGAAGGCCGGCGGTGTGGC
CGCATTCATCGATGCCGAGCATGCGCTCGATCCGGTCTATGCCCGTAAGCTGGGCGTCGACACCGATTCGTTGATCGTCT
CTCAGCCGGACAATGGCGAGCAGGCATTGGAAATCGCCGACATGCTGATTCGTTCCGGCGCGCTTGACGTGATTGTCATC
GATTCCGTCGCGGCCTTGGTGCCGAAAGCGGAAATCGAAGGCGAGATGGGAGACAGCCATGTCGGCCTGCAGGCGCGCCT
GATGAGTCAGGCGTTGCGTAAGATGACCGGTGCGCTGGCGCAAGCCGGTACCACCGCCATCTTCATCAACCAGTTGCGTG
AGAAAATTGGCGTGTTCTTCGGTAATCCGGAGACCACCACCGGCGGCAAGGCATTGAAGTTCTACGCGTCCGTACGTATG
GACATCCGCCGTATCCAGACCATTAAGAACGGTGATGAGGCTGTCGGCAACCGTACCAAGGTCAAGGTTGTTAAGAACAA
GATGGCTCCGCCGTTCAAGACCGCCGAATTCGATGTGCTGTACGGCGAGGGCATCTCCAAGGAAGGTTCCGTGCTTGATA
TGGCGTTGCAGGCCAACGTCGTCAAAAAGTCTGGCTCGTGGTTCACCTATGAGGGCGACCAGCTGGGGCAAGGACGCGAA
AACGTGCGTCAGTTCCTCAAGGACAATCCGGAACTCACAGAGGAAATCGAGAACAAGGTCAAGGCGGCATTCGGTCTGAT
CAAACCTACCGACCAGTTCGCCGAGGACGATGGGGCGGAGGACGCCGCGGGCGCGCCGGATGATGGTAAGACGTCTAAAA
CTTCAAAAGCCGCCAAAGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (26-286)

3D structure

• AlphaFold DB: A0A087DQC8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	64.723	90.263	0.584
recA	Acinetobacter baumannii D1279779	66.254	85	0.563
recA	Vibrio cholerae strain A1552	62.029	90.789	0.563
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.029	90.789	0.563
recA	Ralstonia pseudosolanacearum GMI1000	67.732	82.368	0.558
recA	Bacillus subtilis subsp. subtilis str. 168	65.432	85.263	0.558
recA	Pseudomonas stutzeri DSM 10701	64.724	85.789	0.555
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.923	85.526	0.555
recA	Streptococcus mitis NCTC 12261	63.526	86.579	0.55
recA	Streptococcus mitis SK321	63.526	86.579	0.55
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.933	90.263	0.55
recA	Glaesserella parasuis strain SC1401	62.388	88.158	0.55
recA	Streptococcus pneumoniae Rx1	62.918	86.579	0.545
recA	Streptococcus pneumoniae TIGR4	62.918	86.579	0.545
recA	Streptococcus pneumoniae R6	62.918	86.579	0.545
recA	Streptococcus pneumoniae D39	62.918	86.579	0.545
recA	Neisseria gonorrhoeae strain FA1090	65.397	82.895	0.542
recA	Neisseria gonorrhoeae MS11	65.397	82.895	0.542
recA	Neisseria gonorrhoeae MS11	65.397	82.895	0.542
recA	Streptococcus pyogenes NZ131	62.424	86.842	0.542
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.177	89.211	0.537
recA	Lactococcus lactis subsp. cremoris KW2	62.006	86.579	0.537
recA	Streptococcus mutans UA159	61.818	86.842	0.537
recA	Helicobacter pylori strain NCTC11637	61.89	86.316	0.534
recA	Helicobacter pylori 26695	61.89	86.316	0.534
recA	Latilactobacillus sakei subsp. sakei 23K	62.346	85.263	0.532