Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   CSB84_RS04175 Genome accession   NZ_CP029663
Coordinates   790229..791200 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain AR_0228     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 785229..796200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSB84_RS04155 (CSB84_0730) nrdI 786299..786697 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  CSB84_RS04160 (CSB84_0731) nrdE 786660..788765 (+) 2106 WP_000855514.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  CSB84_RS04165 (CSB84_0732) nrdF 788883..789854 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  CSB84_RS04170 - 790035..790190 (+) 156 WP_000499195.1 hypothetical protein -
  CSB84_RS04175 (CSB84_0733) ceuB 790229..791200 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  CSB84_RS04180 (CSB84_0734) - 791187..792143 (+) 957 WP_001245577.1 iron chelate uptake ABC transporter family permease subunit -
  CSB84_RS04185 (CSB84_0735) - 792140..792901 (+) 762 WP_000616840.1 ABC transporter ATP-binding protein -
  CSB84_RS04190 (CSB84_0736) - 793020..793955 (+) 936 WP_000754441.1 siderophore ABC transporter substrate-binding protein -
  CSB84_RS04195 - 794272..794586 (-) 315 WP_001127269.1 CHY zinc finger protein -
  CSB84_RS04200 (CSB84_0737) murB 794604..795527 (-) 924 WP_000608433.1 UDP-N-acetylmuramate dehydrogenase -
  CSB84_RS04205 (CSB84_0738) - 795654..796172 (-) 519 WP_000287207.1 GrpB family protein -

Sequence


Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=255998 CSB84_RS04175 WP_000876318.1 790229..791200(+) (ceuB) [Staphylococcus aureus strain AR_0228]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=255998 CSB84_RS04175 WP_000876318.1 790229..791200(+) (ceuB) [Staphylococcus aureus strain AR_0228]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAATCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTTTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTTATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains


Predicted by InterProScan.

(13-315)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471


Multiple sequence alignment