Detailed information NTG0254432

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CTZ23_RS06385
• Genome accession: NZ_CP024620
• Coordinates: 1332153..1333196 (-)
• Length: 347 a.a.
• NCBI ID: WP_005178495.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain SGAir0564
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1326392..1336616	1332153..1333196	within	0

Gene organization within MGE regions

Location: 1326392..1336616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTZ23_RS06350 (CTZ23_06380)	eno	1326392..1327681 (+)	1290	WP_087662269.1	phosphopyruvate hydratase	-
CTZ23_RS06355 (CTZ23_06385)	-	1327689..1328090 (+)	402	WP_075167982.1	septum formation initiator family protein	-
CTZ23_RS06360 (CTZ23_06390)	ispD	1328050..1328787 (+)	738	WP_005178503.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
CTZ23_RS06365 (CTZ23_06395)	rodA	1328894..1330030 (+)	1137	WP_087662268.1	rod shape-determining protein RodA	-
CTZ23_RS06370 (CTZ23_06400)	-	1330077..1330931 (-)	855	WP_045795420.1	YbgF trimerization domain-containing protein	-
CTZ23_RS06380 (CTZ23_06410)	-	1331458..1332063 (-)	606	WP_087662267.1	regulatory protein RecX	-
CTZ23_RS06385 (CTZ23_06415)	recA	1332153..1333196 (-)	1044	WP_005178495.1	recombinase RecA	Machinery gene
CTZ23_RS06390 (CTZ23_06420)	-	1333342..1333782 (-)	441	WP_104988528.1	RNA-binding S4 domain-containing protein	-
CTZ23_RS06395 (CTZ23_06425)	-	1333775..1334461 (-)	687	WP_104988529.1	HAD-IA family hydrolase	-
CTZ23_RS06400 (CTZ23_06430)	-	1334474..1335331 (+)	858	WP_104988530.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-
CTZ23_RS06405 (CTZ23_06435)	-	1335387..1336121 (+)	735	WP_104988531.1	histidine phosphatase family protein	-
CTZ23_RS06410 (CTZ23_06440)	rpsT	1336347..1336616 (-)	270	WP_005178484.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37750.17 Da
• Isoelectric Point: 4.9580

>NTDB_id=254432 CTZ23_RS06385 WP_005178495.1 1332153..1333196(-) (recA) [Acinetobacter indicus strain SGAir0564]
MDENKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGEKIGQGKNNTIRHLEEHPELAQTIEK
LIREQLLTTGNVVEEKDEEEPDFSLDL

Nucleotide

• Length: 1044 bp

>NTDB_id=254432 CTZ23_RS06385 WP_005178495.1 1332153..1333196(-) (recA) [Acinetobacter indicus strain SGAir0564]
ATGGATGAGAATAAAAGCAAGGCGCTAAATGCTGCCCTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTAATGCG
TCTTGGTGACAATACCGTACAGGCTGTAGAAGCAGTATCTACCGGTTCATTAACGCTGGATATCGCGCTCGGTATTGGCG
GTTTACCCAAAGGCCGTATTATTGAAATTTATGGCCCTGAATCTTCAGGTAAAACCACAATGACCCTGCAAGCCATTGCG
GAATGTCAAAAAGCCGGCGGCACCTGTGCCTTTATTGATGCCGAACATGCTCTTGATCCTCAATATGCGCGCAAACTGGG
TGTAGATATTGACAACCTGCTGGTTTCACAACCGGACAACGGTGAACAGGCACTGGAAATTGCCGACATGCTGGTACGTT
CAGGCGCAATTGACCTGATCGTTGTCGACTCTGTTGCAGCCCTGACCCCACGTGCTGAAATTGAAGGCGAAATGGGTGAT
TCACATATGGGCTTGCAGGCTCGTCTGATGAGCCAGGCGCTACGTAAAATTACCGGTAATGCCAAACGTTCTAACTGTAT
GGTGATCTTCATTAACCAGATCCGTATGAAGATTGGTGTCATGTTCGGTAGCCCGGAAACCACCACTGGTGGTAACGCAC
TGAAATTCTATGCCTCAGTACGTTTAGATATTCGCCGTGTTGGTCAGGTTAAAGAAGGTGACGAGATTGTCGGTTCTGAA
ACCAAAGTAAAAGTGGTGAAAAACAAGATGGCACCTCCGTTCCGTGAAGCGCTGTTCCAGATTCTGTACGGCAAAGGTGT
AAACCATTTAGGTGAACTGGTCGACCTAGCTGTACAGCAAGAGATTGTACAAAAAGCCGGCGCCTGGTATTCATATCAAG
GTGAAAAGATTGGTCAGGGTAAAAACAATACCATTCGCCATCTGGAAGAACATCCTGAACTGGCACAGACCATTGAAAAA
CTGATTCGTGAACAGCTATTAACCACAGGCAATGTGGTGGAAGAAAAAGACGAAGAAGAACCTGACTTTTCATTAGATCT
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baumannii D1279779	90.805	100	0.911
recA	Acinetobacter baylyi ADP1	89.884	99.712	0.896
recA	Pseudomonas stutzeri DSM 10701	75.988	94.813	0.72
recA	Vibrio cholerae strain A1552	72.892	95.677	0.697
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.892	95.677	0.697
recA	Glaesserella parasuis strain SC1401	70.695	95.389	0.674
recA	Ralstonia pseudosolanacearum GMI1000	72.611	90.49	0.657
recA	Neisseria gonorrhoeae MS11	64.265	100	0.643
recA	Neisseria gonorrhoeae MS11	64.265	100	0.643
recA	Neisseria gonorrhoeae strain FA1090	64.265	100	0.643
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.235	97.983	0.62
recA	Helicobacter pylori strain NCTC11637	62.537	97.695	0.611
recA	Helicobacter pylori 26695	62.242	97.695	0.608
recA	Streptococcus pneumoniae TIGR4	61.765	97.983	0.605
recA	Streptococcus pneumoniae Rx1	61.765	97.983	0.605
recA	Streptococcus pneumoniae D39	61.765	97.983	0.605
recA	Streptococcus pneumoniae R6	61.765	97.983	0.605
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.142	95.389	0.602
recA	Streptococcus mutans UA159	59.942	100	0.599
recA	Streptococcus pyogenes NZ131	58.475	100	0.597
recA	Streptococcus mitis SK321	60.117	98.271	0.591
recA	Streptococcus mitis NCTC 12261	60.117	98.271	0.591
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.038	91.354	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	62.422	92.795	0.579
recA	Lactococcus lactis subsp. cremoris KW2	58.824	93.084	0.548
recA	Latilactobacillus sakei subsp. sakei 23K	58.879	92.507	0.545