Detailed information NTG0024948

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GMET_RS00995
• Genome accession: NC_007517
• Coordinates: 229709..230728 (+)
• Length: 339 a.a.
• NCBI ID: WP_004512787.1
• Uniprot ID: Q39Z80
• Organism: Geobacter metallireducens GS-15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 224709..235728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GMET_RS00980 (Gmet_0195)	-	225734..226183 (+)	450	WP_004512784.1	phosphatidylglycerophosphatase A	-
GMET_RS00985 (Gmet_0196)	-	226180..227421 (+)	1242	WP_004512785.1	competence/damage-inducible protein A	-
GMET_RS00990 (Gmet_0197)	-	227447..229579 (+)	2133	WP_011365633.1	sensor histidine kinase	-
GMET_RS00995 (Gmet_0198)	recA	229709..230728 (+)	1020	WP_004512787.1	recombinase RecA	Machinery gene
GMET_RS01000 (Gmet_0199)	-	230732..231895 (+)	1164	WP_004512788.1	type IV pilus twitching motility protein PilT	-
GMET_RS01005 (Gmet_0200)	-	231896..232363 (+)	468	WP_004512789.1	regulatory protein RecX	-
GMET_RS01010 (Gmet_0201)	alaS	232404..235034 (+)	2631	WP_004512790.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 339 a.a.
• Molecular weight: 36475.97 Da
• Isoelectric Point: 5.5447

>NTDB_id=24948 GMET_RS00995 WP_004512787.1 229709..230728(+) (recA) [Geobacter metallireducens GS-15]
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDIDAIPTGALSLDIALGVGGVPRGRVIEIYGPESSGKTTLALHIA
AEAQKLGGIAAFVDAEHALDIGYARKLGVRTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRKIATLKQGDAVIGS
RTKVKVVKNKVAPPFREVEFDIYYGEGISRLGDLLDLAVDRKIIDKSGAWFSYGSDRIGQGRENSRNFLKEHPEMVAEIE
DKIYETAGIPRKGGKEEAA

Nucleotide

• Length: 1020 bp

>NTDB_id=24948 GMET_RS00995 WP_004512787.1 229709..230728(+) (recA) [Geobacter metallireducens GS-15]
GTGACCCAGGAACGCGAGAAGGCGATTGAGCTGGCACTGAGCCAGATAGAGAAGCAGTTCGGCAAGGGCGCCATCATGCG
GCTGGGTGCTGACGAGGCCCTGCCGGACATCGACGCCATCCCCACCGGCGCCCTCTCCCTGGATATCGCCCTGGGGGTGG
GCGGGGTTCCCCGGGGACGGGTCATCGAGATCTACGGCCCCGAGTCGTCGGGCAAGACGACCCTCGCCCTCCACATCGCC
GCCGAGGCCCAGAAGCTGGGCGGCATCGCGGCCTTCGTGGATGCCGAGCACGCCCTGGACATCGGCTATGCCCGCAAGCT
GGGTGTTCGGACCGACGACCTCCTGGTCTCCCAGCCCGACACGGGGGAGCAGGCCCTTGAGATCGCCGAGATGCTCGTGC
GGAGCGGCGCCGTGGACGTCCTCGTCATCGACTCGGTGGCGGCCCTCGTTCCCAAGGCCGAGATCGAGGGGGAGATGGGG
GACTCCCACGTGGGGCTCCAGGCCCGCCTCATGTCCCAGGCCCTGCGCAAGCTCACCGGCATCATCTCCAAGTCCAACTG
CTGCGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAGCCCCGAGACCACCACCGGCGGCAACG
CCCTCAAGTTCTACGCTTCGGTCCGCCTCGACATCCGCAAGATCGCCACCCTCAAGCAGGGGGATGCGGTGATCGGCTCC
CGCACCAAGGTGAAGGTGGTGAAGAACAAGGTGGCTCCCCCCTTCAGGGAGGTGGAGTTCGACATCTACTACGGCGAGGG
GATATCCCGCCTGGGGGACCTCCTGGACCTGGCCGTTGACCGCAAGATCATCGACAAGAGCGGTGCCTGGTTTTCCTACG
GCTCCGACCGGATCGGCCAGGGACGCGAGAACTCCCGGAATTTCCTCAAGGAGCATCCGGAGATGGTGGCCGAAATCGAG
GACAAGATTTACGAAACGGCCGGCATTCCCCGCAAAGGGGGGAAGGAAGAGGCGGCGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: Q39Z80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	69.97	98.23	0.687
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.182	97.345	0.664
recA	Glaesserella parasuis strain SC1401	68.519	95.575	0.655
recA	Acinetobacter baylyi ADP1	68.308	95.87	0.655
recA	Pseudomonas stutzeri DSM 10701	68.421	95.28	0.652
recA	Acinetobacter baumannii D1279779	67.385	95.87	0.646
recA	Helicobacter pylori strain NCTC11637	66.972	96.46	0.646
recA	Helicobacter pylori 26695	66.667	96.46	0.643
recA	Neisseria gonorrhoeae MS11	65.957	97.05	0.64
recA	Neisseria gonorrhoeae MS11	65.957	97.05	0.64
recA	Neisseria gonorrhoeae strain FA1090	65.957	97.05	0.64
recA	Bacillus subtilis subsp. subtilis str. 168	65.152	97.345	0.634
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.839	94.985	0.625
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.923	95.87	0.622
recA	Vibrio cholerae strain A1552	64.923	95.87	0.622
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.11	96.755	0.611
recA	Latilactobacillus sakei subsp. sakei 23K	63.19	96.165	0.608
recA	Streptococcus pneumoniae R6	61.818	97.345	0.602
recA	Streptococcus pneumoniae Rx1	61.818	97.345	0.602
recA	Streptococcus pneumoniae D39	61.818	97.345	0.602
recA	Streptococcus pneumoniae TIGR4	61.818	97.345	0.602
recA	Lactococcus lactis subsp. cremoris KW2	61.515	97.345	0.599
recA	Streptococcus mutans UA159	60.059	99.705	0.599
recA	Streptococcus mitis SK321	62.654	95.575	0.599
recA	Streptococcus pyogenes NZ131	62.654	95.575	0.599
recA	Streptococcus mitis NCTC 12261	62.346	95.575	0.596