Detailed information NTG0248272

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CO230_RS01300
• Genome accession: NZ_CP023540
• Coordinates: 283224..284225 (+)
• Length: 333 a.a.
• NCBI ID: WP_122026955.1
• Uniprot ID: A0A3G2T9V8
• Organism: Chryseobacterium sp. 6424
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 278224..289225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO230_RS01290 (CO230_01295)	-	278413..282870 (+)	4458	WP_122026954.1	Eco57I restriction-modification methylase domain-containing protein	-
CO230_RS01300 (CO230_01305)	recA	283224..284225 (+)	1002	WP_122026955.1	recombinase RecA	Machinery gene
CO230_RS01305 (CO230_01310)	htpG	284356..286248 (+)	1893	WP_122026956.1	molecular chaperone HtpG	-
CO230_RS01310 (CO230_01315)	-	286333..287307 (+)	975	WP_122026957.1	deoxyhypusine synthase family protein	-
CO230_RS01315 (CO230_01320)	-	287386..287769 (-)	384	WP_122026958.1	GreA/GreB family elongation factor	-
CO230_RS01320 (CO230_01325)	arfB	288088..288480 (-)	393	WP_122026959.1	alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35687.02 Da
• Isoelectric Point: 5.3277

>NTDB_id=248272 CO230_RS01300 WP_122026955.1 283224..284225(+) (recA) [Chryseobacterium sp. 6424]
MSNIEDKKKALSLVLDKLDKTYGKGTVMTLGDASVDDSIEVIPSGSLGLDLALGVGGYPKGRVIEIYGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRHYAAKLGIDLDDLIISQPDNGEQALEIADNLIRSGAIDIVVIDSVAALTPKAEIEGE
MGDSKMGLHARLMSQALRKLTGTISKTKCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRIDIRKASAPIKTGDEA
VGSRVKVKIVKNKVAPPFKMAEFDIMYGEGVSKVGEILDMAVETGVVKKSGSWFSYEDTKLGQGRDAVRDMLKDNPELAE
ELEAKIKETVQTK

Nucleotide

• Length: 1002 bp

>NTDB_id=248272 CO230_RS01300 WP_122026955.1 283224..284225(+) (recA) [Chryseobacterium sp. 6424]
ATGAGCAACATAGAAGATAAGAAAAAAGCACTCTCGCTGGTGCTTGATAAGCTAGATAAAACATACGGTAAAGGTACCGT
AATGACTTTGGGTGATGCCTCGGTAGATGATTCCATTGAAGTTATTCCTTCAGGTTCCCTGGGCCTTGACCTTGCGTTAG
GTGTAGGCGGTTACCCAAAAGGCCGTGTAATAGAAATATACGGTCCTGAATCTTCAGGTAAAACCACCTTGACCTTACAC
GCCATTGCAGAAGCACAAAAAGCAGGCGGCATCGCGGCTTTCATTGATGCTGAACACGCTTTCGACCGTCATTACGCGGC
TAAATTGGGGATTGATTTAGATGATCTAATCATTTCTCAGCCCGATAATGGGGAGCAGGCTCTGGAAATTGCCGATAACC
TTATCCGATCCGGCGCCATCGACATCGTAGTCATCGACTCTGTGGCGGCTTTAACGCCAAAAGCAGAGATTGAAGGGGAA
ATGGGCGATTCCAAAATGGGACTTCATGCAAGGCTGATGTCACAGGCCTTAAGAAAACTTACAGGTACCATTTCGAAGAC
GAAATGTACGGTGATTTTCATTAATCAGCTTCGTGAGAAAATCGGTGTAATGTTCGGGAATCCGGAGACAACTACCGGTG
GTAACGCACTGAAATTCTATGCTTCAGTGAGGATTGATATCCGTAAAGCCAGTGCGCCGATTAAAACCGGCGATGAGGCT
GTGGGAAGCCGCGTAAAAGTAAAGATCGTTAAAAATAAAGTAGCGCCACCATTTAAAATGGCCGAATTCGATATTATGTA
TGGCGAAGGTGTATCTAAAGTTGGCGAAATCCTGGATATGGCTGTAGAAACAGGCGTGGTGAAAAAGAGCGGCTCTTGGT
TTAGCTATGAAGATACCAAACTTGGTCAAGGCAGAGACGCGGTTAGGGATATGTTGAAAGACAATCCGGAACTTGCCGAA
GAACTGGAGGCTAAGATTAAAGAAACAGTGCAGACTAAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

3D structure

• AlphaFold DB: A0A3G2T9V8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	80.24	100	0.805
recA	Ralstonia pseudosolanacearum GMI1000	65.075	100	0.655
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.526	98.198	0.634
recA	Glaesserella parasuis strain SC1401	64.417	97.898	0.631
recA	Acinetobacter baumannii D1279779	64.024	98.498	0.631
recA	Acinetobacter baylyi ADP1	63.526	98.799	0.628
recA	Helicobacter pylori strain NCTC11637	63.609	98.198	0.625
recA	Helicobacter pylori 26695	63.609	98.198	0.625
recA	Neisseria gonorrhoeae strain FA1090	62.539	96.997	0.607
recA	Neisseria gonorrhoeae MS11	62.539	96.997	0.607
recA	Neisseria gonorrhoeae MS11	62.539	96.997	0.607
recA	Pseudomonas stutzeri DSM 10701	61.92	96.997	0.601
recA	Bacillus subtilis subsp. subtilis str. 168	61.538	97.598	0.601
recA	Vibrio cholerae strain A1552	60.429	97.898	0.592
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.429	97.898	0.592
recA	Lactococcus lactis subsp. cremoris KW2	59.816	97.898	0.586
recA	Streptococcus mitis NCTC 12261	60	97.598	0.586
recA	Streptococcus mitis SK321	60	97.598	0.586
recA	Streptococcus pneumoniae R6	59.385	97.598	0.58
recA	Streptococcus pneumoniae TIGR4	59.385	97.598	0.58
recA	Streptococcus pneumoniae Rx1	59.385	97.598	0.58
recA	Streptococcus pneumoniae D39	59.385	97.598	0.58
recA	Streptococcus pyogenes NZ131	58.896	97.898	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	59.443	96.997	0.577
recA	Streptococcus mutans UA159	57.975	97.898	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.061	99.099	0.556