Detailed information NTG0245699

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AOC34_RS08915
• Genome accession: NZ_CP023276
• Coordinates: 1756021..1757112 (-)
• Length: 363 a.a.
• NCBI ID: WP_199908364.1
• Uniprot ID: -
• Organism: Polynucleobacter difficilis strain AM-8B5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1751021..1762112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOC34_RS08880	-	1751374..1751529 (+)	156	Protein_1748	cyclic pyranopterin monophosphate synthase MoaC	-
AOC34_RS08885	-	1751574..1751768 (+)	195	WP_159074849.1	hypothetical protein	-
AOC34_RS08890	-	1751842..1752354 (-)	513	WP_108469719.1	pilin	-
AOC34_RS08895	-	1752466..1753167 (-)	702	WP_108469720.1	TerC family protein	-
AOC34_RS08900	sucD	1753229..1754122 (-)	894	WP_108469721.1	succinate--CoA ligase subunit alpha	-
AOC34_RS08905	sucC	1754137..1755306 (-)	1170	WP_108469722.1	ADP-forming succinate--CoA ligase subunit beta	-
AOC34_RS08910	-	1755474..1756028 (-)	555	WP_108469723.1	regulatory protein RecX	-
AOC34_RS08915	recA	1756021..1757112 (-)	1092	WP_199908364.1	recombinase RecA	Machinery gene
AOC34_RS08920	-	1757272..1757802 (-)	531	WP_159074850.1	DUF2878 domain-containing protein	-
AOC34_RS08925	-	1757824..1758372 (-)	549	WP_108469726.1	DUF3833 domain-containing protein	-
AOC34_RS08930	-	1758369..1758965 (-)	597	WP_108469727.1	chalcone isomerase family protein	-
AOC34_RS08935	-	1759057..1759467 (+)	411	WP_108469728.1	rhodanese-like domain-containing protein	-
AOC34_RS08940	htpG	1759605..1761503 (+)	1899	WP_108469729.1	molecular chaperone HtpG	-
AOC34_RS08945	-	1761510..1761899 (+)	390	WP_108469730.1	OsmC family protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 38854.33 Da
• Isoelectric Point: 4.8176

>NTDB_id=245699 AOC34_RS08915 WP_199908364.1 1756021..1757112(-) (recA) [Polynucleobacter difficilis strain AM-8B5]
MDDKKKSASSEFDGMSGDKQKALSAALAQIEKQFGKGSIMRLGDAEINQDIQVVSSGSLGLDIALGVGGLARGRVIEIYG
PESSGKTTLTLHAIAEMQKIGGTCAFIDAEHALDVQYASRLGVDVNNLLISQPDTGEQALEIADALVRSGSIDLIVIDSV
AALVPRAEIEGDMGDSLPGLQARLMSQALRKLTGTIKRTNSMVIFINQIRMKIGVMFGSPETTTGGNALKFYATMRLDIR
RIGSIKKGDEVVGNETRVKVVKNKVSPPFREAIFDIMYGAGISREGEIIDMGVEADIVEKSGSWYSYNGDRIGQGKDNVR
DFLKENPEIAKDIEAKIRAKLGVKAGLAITDAVDDTEIESADA

Nucleotide

• Length: 1092 bp

>NTDB_id=245699 AOC34_RS08915 WP_199908364.1 1756021..1757112(-) (recA) [Polynucleobacter difficilis strain AM-8B5]
ATGGACGATAAGAAAAAATCAGCATCATCAGAATTTGACGGCATGAGTGGCGATAAGCAAAAAGCCTTATCAGCGGCGCT
GGCGCAAATTGAAAAGCAGTTCGGCAAGGGCTCCATCATGCGCTTGGGCGATGCTGAAATTAACCAAGACATTCAGGTGG
TATCGAGCGGATCCTTGGGTCTTGATATTGCCCTTGGAGTCGGCGGCCTTGCGCGCGGTCGTGTGATTGAAATTTACGGT
CCAGAGTCGTCTGGAAAAACCACATTGACATTGCATGCGATTGCCGAAATGCAAAAGATTGGCGGCACCTGTGCATTTAT
CGATGCAGAGCATGCGCTCGATGTGCAATACGCATCACGCCTGGGTGTGGATGTGAACAACTTGCTGATTTCTCAGCCAG
ACACTGGTGAGCAGGCGCTCGAAATTGCAGACGCCTTAGTGCGTTCGGGTTCGATTGATTTAATCGTTATTGACTCGGTA
GCAGCCTTAGTTCCGCGCGCCGAAATCGAAGGCGATATGGGCGATTCATTGCCTGGCCTGCAAGCGCGTTTGATGAGCCA
AGCCTTGCGCAAATTAACGGGAACAATCAAGCGCACCAATTCCATGGTGATCTTTATTAACCAGATTCGCATGAAGATTG
GTGTGATGTTTGGTTCCCCTGAAACAACCACAGGTGGTAATGCATTGAAGTTCTATGCCACCATGCGTTTAGACATTCGC
CGTATTGGTAGCATCAAAAAGGGTGATGAGGTAGTTGGCAACGAAACCCGCGTTAAGGTTGTTAAGAACAAGGTTTCACC
GCCTTTCCGCGAAGCCATTTTTGACATCATGTACGGCGCAGGAATTTCACGTGAGGGTGAAATAATCGATATGGGTGTCG
AAGCCGATATCGTAGAGAAGTCTGGTTCTTGGTATAGCTATAACGGCGACCGCATTGGTCAAGGTAAAGATAATGTTCGC
GATTTTCTGAAAGAGAATCCTGAAATTGCGAAAGACATCGAAGCCAAGATTCGTGCCAAGCTGGGCGTTAAAGCAGGTCT
TGCAATCACAGATGCAGTAGACGATACGGAGATTGAATCGGCTGATGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	80.966	96.97	0.785
recA	Neisseria gonorrhoeae MS11	72.141	93.939	0.678
recA	Neisseria gonorrhoeae MS11	72.141	93.939	0.678
recA	Neisseria gonorrhoeae strain FA1090	72.141	93.939	0.678
recA	Acinetobacter baylyi ADP1	70.435	95.041	0.669
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.529	95.868	0.647
recA	Vibrio cholerae strain A1552	67.529	95.868	0.647
recA	Acinetobacter baumannii D1279779	71.865	90.083	0.647
recA	Pseudomonas stutzeri DSM 10701	70.948	90.083	0.639
recA	Glaesserella parasuis strain SC1401	67.251	94.215	0.634
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.743	94.215	0.601
recA	Bacillus subtilis subsp. subtilis str. 168	66.564	89.807	0.598
recA	Helicobacter pylori 26695	65.951	89.807	0.592
recA	Helicobacter pylori strain NCTC11637	65.644	89.807	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.35	91.185	0.587
recA	Latilactobacillus sakei subsp. sakei 23K	63.19	89.807	0.567
recA	Streptococcus pneumoniae D39	59.593	94.766	0.565
recA	Streptococcus pneumoniae Rx1	59.593	94.766	0.565
recA	Streptococcus pneumoniae R6	59.593	94.766	0.565
recA	Streptococcus pneumoniae TIGR4	59.593	94.766	0.565
recA	Lactococcus lactis subsp. cremoris KW2	55.738	100	0.562
recA	Streptococcus mitis NCTC 12261	59.064	94.215	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.261	95.041	0.554
recA	Streptococcus pyogenes NZ131	58.14	94.766	0.551
recA	Streptococcus mitis SK321	60	90.909	0.545
recA	Streptococcus mutans UA159	59.697	90.909	0.543