Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CHF17_RS10580 | Genome accession | NZ_CP022537 |
| Coordinates | 2052222..2053361 (-) | Length | 379 a.a. |
| NCBI ID | WP_001085741.1 | Uniprot ID | A0AAV3JP53 |
| Organism | Streptococcus agalactiae strain 874391 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2048950..2083095 | 2052222..2053361 | within | 0 |
Gene organization within MGE regions
Location: 2048950..2083095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHF17_RS11510 (CHF17_02076) | - | 2050173..2050295 (-) | 123 | WP_001285712.1 | hypothetical protein | - |
| CHF17_RS10560 (CHF17_02077) | - | 2050378..2050695 (-) | 318 | WP_000940933.1 | DUF1292 domain-containing protein | - |
| CHF17_RS10565 (CHF17_02078) | ruvX | 2050721..2051140 (-) | 420 | WP_001873911.1 | Holliday junction resolvase RuvX | - |
| CHF17_RS10570 (CHF17_02079) | - | 2051140..2051406 (-) | 267 | WP_000507056.1 | IreB family regulatory phosphoprotein | - |
| CHF17_RS10575 (CHF17_02080) | spx | 2051608..2052006 (-) | 399 | WP_000591161.1 | transcriptional regulator Spx | - |
| CHF17_RS10580 (CHF17_02081) | recA | 2052222..2053361 (-) | 1140 | WP_001085741.1 | recombinase RecA | Machinery gene |
| CHF17_RS10585 (CHF17_02082) | cinA | 2053435..2054694 (-) | 1260 | WP_001200982.1 | competence/damage-inducible protein A | Machinery gene |
| CHF17_RS10590 (CHF17_02083) | - | 2054783..2055334 (-) | 552 | WP_000817340.1 | DNA-3-methyladenine glycosylase I | - |
| CHF17_RS10595 (CHF17_02084) | ruvA | 2055357..2055947 (-) | 591 | WP_000272489.1 | Holliday junction branch migration protein RuvA | - |
| CHF17_RS10600 (CHF17_02085) | - | 2055949..2057181 (-) | 1233 | WP_000657474.1 | MFS transporter | - |
| CHF17_RS10605 (CHF17_02086) | mutL | 2057213..2059186 (-) | 1974 | WP_000034615.1 | DNA mismatch repair endonuclease MutL | - |
| CHF17_RS10615 (CHF17_02087) | - | 2059412..2059615 (+) | 204 | WP_000191849.1 | cold shock domain-containing protein | - |
| CHF17_RS10620 (CHF17_02088) | mutS | 2059672..2062248 (-) | 2577 | WP_001118373.1 | DNA mismatch repair protein MutS | - |
| CHF17_RS10625 (CHF17_02089) | argR | 2062305..2062742 (-) | 438 | WP_001033152.1 | arginine repressor | - |
| CHF17_RS10630 (CHF17_02090) | argS | 2062964..2064655 (+) | 1692 | WP_000379872.1 | arginine--tRNA ligase | - |
| CHF17_RS10635 (CHF17_02091) | - | 2064743..2065051 (+) | 309 | WP_001138859.1 | bacteriocin immunity protein | - |
| CHF17_RS10640 (CHF17_02092) | - | 2065078..2065950 (-) | 873 | WP_000915474.1 | YitT family protein | - |
| CHF17_RS10645 (CHF17_02093) | - | 2066058..2067002 (-) | 945 | WP_000857770.1 | YitT family protein | - |
| CHF17_RS10650 (CHF17_02094) | aspS | 2066992..2068743 (-) | 1752 | WP_000830928.1 | aspartate--tRNA ligase | - |
| CHF17_RS10655 (CHF17_02095) | hisS | 2068836..2070116 (-) | 1281 | WP_000775911.1 | histidine--tRNA ligase | - |
| CHF17_RS10660 (CHF17_02096) | rpmF | 2070336..2070518 (+) | 183 | WP_000290414.1 | 50S ribosomal protein L32 | - |
| CHF17_RS10665 (CHF17_02097) | rpmG | 2070534..2070683 (+) | 150 | WP_001265622.1 | 50S ribosomal protein L33 | - |
| CHF17_RS11490 | - | 2070762..2070946 (-) | 185 | Protein_1982 | FanG protein | - |
| CHF17_RS10675 (CHF17_02098) | - | 2070975..2071589 (+) | 615 | WP_000615736.1 | CadD family cadmium resistance transporter | - |
| CHF17_RS10680 (CHF17_02099) | cadX | 2071601..2071939 (+) | 339 | WP_000711078.1 | Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX | - |
| CHF17_RS10685 (CHF17_02100) | - | 2071990..2073405 (+) | 1416 | WP_000667640.1 | helix-turn-helix transcriptional regulator | - |
| CHF17_RS10690 (CHF17_02101) | - | 2073726..2074175 (+) | 450 | WP_000066889.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| CHF17_RS10695 (CHF17_02102) | - | 2074377..2074697 (+) | 321 | WP_000874694.1 | hypothetical protein | - |
| CHF17_RS10700 (CHF17_02103) | - | 2074697..2075797 (+) | 1101 | WP_000203865.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CHF17_RS10705 (CHF17_02104) | - | 2075794..2076399 (+) | 606 | WP_000182709.1 | hypothetical protein | - |
| CHF17_RS10710 (CHF17_02105) | - | 2076605..2077210 (+) | 606 | WP_001040935.1 | replication protein | - |
| CHF17_RS10715 (CHF17_02106) | - | 2077203..2077451 (+) | 249 | WP_001058391.1 | MerR family transcriptional regulator | - |
| CHF17_RS10720 (CHF17_02107) | - | 2077541..2078806 (+) | 1266 | WP_000447185.1 | site-specific integrase | - |
| CHF17_RS10725 (CHF17_02108) | - | 2079165..2079836 (+) | 672 | WP_000186293.1 | PepSY domain-containing protein | - |
| CHF17_RS10730 (CHF17_02109) | - | 2079921..2080592 (+) | 672 | WP_000699618.1 | response regulator | - |
| CHF17_RS10735 (CHF17_02110) | - | 2080576..2081940 (+) | 1365 | WP_000898851.1 | HAMP domain-containing sensor histidine kinase | - |
Sequence
Protein
Download Length: 379 a.a. Molecular weight: 40917.44 Da Isoelectric Point: 5.0474
>NTDB_id=240523 CHF17_RS10580 WP_001085741.1 2052222..2053361(-) (recA) [Streptococcus agalactiae strain 874391]
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVEEKNEADDLVLDLDNAIEIEE
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVEEKNEADDLVLDLDNAIEIEE
Nucleotide
Download Length: 1140 bp
>NTDB_id=240523 CHF17_RS10580 WP_001085741.1 2052222..2053361(-) (recA) [Streptococcus agalactiae strain 874391]
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTCTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGCTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGGACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTGAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTCTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGCTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGGACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTGAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.