Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   BG910_RS01855 Genome accession   NZ_CP022278
Coordinates   370642..371688 (+) Length   348 a.a.
NCBI ID   WP_089035374.1    Uniprot ID   A0A220RZS3
Organism   Neisseria chenwenguii strain 10023     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 365642..376688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS01835 (BG910_01830) - 366446..367120 (-) 675 WP_198344813.1 nitroreductase -
  BG910_RS01840 (BG910_01835) - 367521..368387 (+) 867 WP_089035371.1 LysR family transcriptional regulator -
  BG910_RS01845 (BG910_01840) garR 368436..369326 (-) 891 WP_089035372.1 2-hydroxy-3-oxopropionate reductase -
  BG910_RS01850 (BG910_01845) garL 369420..370190 (-) 771 WP_089035373.1 2-dehydro-3-deoxyglucarate aldolase -
  BG910_RS01855 (BG910_01850) recA 370642..371688 (+) 1047 WP_089035374.1 recombinase RecA Machinery gene
  BG910_RS01860 (BG910_01855) - 371852..372439 (-) 588 WP_089035375.1 uracil-DNA glycosylase family protein -
  BG910_RS01865 (BG910_01860) - 372881..373525 (+) 645 WP_089035376.1 spore coat protein U domain-containing protein -
  BG910_RS01870 (BG910_01865) - 373696..374406 (+) 711 WP_089035377.1 molecular chaperone -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 37611.85 Da        Isoelectric Point: 4.8930

>NTDB_id=237836 BG910_RS01855 WP_089035374.1 370642..371688(+) (recA) [Neisseria chenwenguii strain 10023]
MSDEKSKALAAALAQIEKNFGKGSIMKMDGSQQEENLDVISTGSLGLDLALGVGGLPRGRVVEIFGPESSGKTTLCLESI
AQCQKNGGICAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGN
ETKVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKHNIVEKSGAWYSYNGAKIGQGKDNVRLWLKENPDTANEID
AKIRAAVGVNMDITEGSLDETDGERPEE

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=237836 BG910_RS01855 WP_089035374.1 370642..371688(+) (recA) [Neisseria chenwenguii strain 10023]
ATGTCAGACGAAAAAAGCAAAGCCCTCGCCGCCGCCCTTGCCCAAATCGAAAAAAACTTCGGCAAAGGTTCCATCATGAA
GATGGACGGCAGCCAGCAGGAAGAAAACCTCGACGTCATCTCCACCGGCTCGCTCGGCCTTGACTTGGCGCTGGGCGTCG
GCGGCCTGCCGCGCGGCCGCGTCGTCGAAATCTTCGGTCCCGAATCCTCAGGCAAAACCACACTCTGCCTCGAATCCATC
GCCCAATGCCAGAAAAACGGCGGCATCTGCGCCTTTATTGATGCCGAACACGCCTTCGACCCGATTTACGCCCGCAAGCT
CGGCGTCAAAGTCGAAGAGCTTTACCTCTCCCAACCCGACACCGGCGAACAGGCGCTGGAAATCTGCGATACCCTCGTGC
GCTCCGGCGGTGTCGACATGGTCGTCGTCGATTCCGTTGCCGCCCTCGTCCCCAAAGCCGAAATCGAAGGCGAAATGGGC
GACAGCCACGTCGGCCTGCAAGCCCGCCTGATGAGCCAGGCGCTGCGCAAACTCACCGGCCACATCAAGCGCACCAACAC
CCTTGTCGTCTTCATCAACCAGATCCGCATGAAAATCGGCGTCATGTTCGGCAGCCCCGAAACCACCACCGGCGGCAATG
CCCTAAAATTCTACGCCTCCGTCCGCCTCGACATCCGCCGCACCGGCCAGATTAAAAAAGGCGACGACGTCATCGGCAAC
GAAACCAAAGTCAAAGTCATCAAAAACAAAGTCGCCCCGCCGTTCCGCCAAGCCGAATTCGACATCCTCTACGGCGAAGG
CATCAGTTGGGAAGGCGAACTGATCGACATCGGCGTCAAACACAACATCGTCGAAAAATCGGGCGCGTGGTACAGCTATA
ACGGTGCCAAAATCGGCCAAGGCAAAGACAACGTGCGCCTGTGGCTGAAAGAAAATCCCGATACCGCCAACGAAATCGAC
GCCAAAATCCGCGCCGCCGTCGGCGTGAATATGGACATCACCGAAGGCAGTCTCGACGAAACCGACGGCGAACGCCCCGA
GGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A220RZS3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Neisseria gonorrhoeae MS11

90.23

100

0.902

  recA Neisseria gonorrhoeae strain FA1090

90.23

100

0.902

  recA Neisseria gonorrhoeae MS11

90.23

100

0.902

  recA Ralstonia pseudosolanacearum GMI1000

76.97

94.828

0.73

  recA Glaesserella parasuis strain SC1401

67.236

100

0.678

  recA Acinetobacter baylyi ADP1

68.314

98.851

0.675

  recA Pseudomonas stutzeri DSM 10701

71.692

93.391

0.67

  recA Vibrio cholerae O1 biovar El Tor strain E7946

70.988

93.103

0.661

  recA Vibrio cholerae strain A1552

70.988

93.103

0.661

  recA Acinetobacter baumannii D1279779

65.994

99.713

0.658

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.516

97.989

0.632

  recA Helicobacter pylori 26695

65.269

95.977

0.626

  recA Helicobacter pylori strain NCTC11637

65.269

95.977

0.626

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

66.159

94.253

0.624

  recA Bacillus subtilis subsp. subtilis str. 168

65.455

94.828

0.621

  recA Latilactobacillus sakei subsp. sakei 23K

61.224

98.563

0.603

  recA Streptococcus mutans UA159

58.857

100

0.592

  recA Streptococcus pneumoniae Rx1

59.195

100

0.592

  recA Streptococcus pneumoniae TIGR4

59.195

100

0.592

  recA Streptococcus pneumoniae R6

59.195

100

0.592

  recA Streptococcus pneumoniae D39

59.195

100

0.592

  recA Streptococcus mitis NCTC 12261

59.593

98.851

0.589

  recA Lactococcus lactis subsp. cremoris KW2

61.818

94.828

0.586

  recA Streptococcus pyogenes NZ131

61.515

94.828

0.583

  recA Streptococcus mitis SK321

60.909

94.828

0.578

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.327

93.966

0.557


Multiple sequence alignment