Detailed information NTG0237795

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CFF01_RS13320
• Genome accession: NZ_CP022272
• Coordinates: 2997765..2998826 (-)
• Length: 353 a.a.
• NCBI ID: WP_033538570.1
• Uniprot ID: -
• Organism: Shewanella marisflavi strain EP1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2992765..3003826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFF01_RS13305 (CFF01_13305)	csrA	2993967..2994164 (-)	198	WP_033538568.1	carbon storage regulator CsrA	-
CFF01_RS13310 (CFF01_13310)	alaS	2994471..2997095 (-)	2625	WP_088905115.1	alanine--tRNA ligase	-
CFF01_RS13315 (CFF01_13315)	recX	2997287..2997736 (-)	450	WP_081953784.1	recombination regulator RecX	-
CFF01_RS13320 (CFF01_13320)	recA	2997765..2998826 (-)	1062	WP_033538570.1	recombinase RecA	Machinery gene
CFF01_RS13325 (CFF01_13325)	mutS	2999159..3001726 (+)	2568	WP_088905116.1	DNA mismatch repair protein MutS	-
CFF01_RS13330 (CFF01_13330)	rpoS	3001909..3002883 (-)	975	WP_033538572.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37721.24 Da
• Isoelectric Point: 5.0581

>NTDB_id=237795 CFF01_RS13320 WP_033538570.1 2997765..2998826(-) (recA) [Shewanella marisflavi strain EP1]
MKIDANKEKALSAVLGQIEKQFGKGSIMKLGENRSMDVETISTGSLSLDVALGAGGLPLGRIVEIYGPESSGKTTLTLEV
IAAAQREGKVCAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
NETRVKVVKNKIAAPFKQAEFQILYGEGINRTGELVDLGVTHKLIEKSGAWYSYKGDKIGQGRANAGKYLVENPEVAAEI
DHALRAMLLGGGEVVAKSATGDENIDLETGEVF

Nucleotide

• Length: 1062 bp

>NTDB_id=237795 CFF01_RS13320 WP_033538570.1 2997765..2998826(-) (recA) [Shewanella marisflavi strain EP1]
ATGAAGATTGATGCGAATAAAGAGAAAGCCCTGAGCGCGGTCCTTGGTCAGATTGAAAAGCAGTTCGGTAAAGGTTCCAT
CATGAAGTTAGGTGAAAACCGCTCTATGGATGTTGAAACCATTTCAACAGGTTCTCTGTCGCTGGACGTTGCATTGGGTG
CCGGCGGTTTGCCTCTTGGTCGTATCGTTGAGATCTATGGCCCTGAATCTTCTGGTAAAACGACACTGACACTGGAAGTG
ATTGCTGCGGCGCAGCGCGAGGGTAAGGTTTGTGCCTTTATCGACGCCGAGCATGCATTGGATCCTATCTATGCTCAGAA
ACTCGGTGTAGATATTGATAACCTCTTGTGTTCACAGCCTGATACCGGTGAGCAGGCCCTTGAGATCTGTGACGCCCTGA
CTCGCTCTGGTGCGGTTGATGTGATCATCGTTGACTCGGTAGCGGCTCTGACGCCTAAGGCTGAGATTGAAGGTGAAATT
GGTGATTCTCACATGGGTCTAGCGGCGCGTATGATGAGTCAGGCGATGCGTAAGCTCGCGGGTAACCTCAAGCAATCGAA
TACCTTGCTGATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACGACTACGGGTGGTA
ACGCACTTAAGTTCTACGCATCTGTTCGTCTGGATATCCGTCGTACCGGCGCCATCAAAGATCGTGAAGAAGTCATAGGT
AACGAAACCCGGGTGAAAGTGGTTAAGAACAAGATTGCTGCGCCATTTAAACAGGCTGAGTTCCAGATTCTATATGGTGA
AGGCATTAACCGTACTGGCGAGCTGGTGGATCTGGGTGTTACCCATAAGCTGATTGAGAAGTCAGGTGCTTGGTATAGCT
ACAAAGGTGACAAGATTGGTCAAGGCCGTGCCAACGCAGGTAAGTATCTGGTTGAAAACCCAGAGGTGGCTGCAGAGATC
GATCATGCGCTGCGTGCCATGTTACTTGGCGGTGGTGAAGTGGTCGCAAAATCGGCGACGGGCGATGAAAATATCGACCT
GGAAACTGGCGAAGTATTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	79.714	99.15	0.79
recA	Vibrio cholerae O1 biovar El Tor strain E7946	79.714	99.15	0.79
recA	Pseudomonas stutzeri DSM 10701	74.312	92.635	0.688
recA	Glaesserella parasuis strain SC1401	69.231	95.751	0.663
recA	Acinetobacter baumannii D1279779	67.826	97.734	0.663
recA	Neisseria gonorrhoeae MS11	68.142	96.034	0.654
recA	Neisseria gonorrhoeae MS11	68.142	96.034	0.654
recA	Neisseria gonorrhoeae strain FA1090	68.142	96.034	0.654
recA	Acinetobacter baylyi ADP1	70.642	92.635	0.654
recA	Ralstonia pseudosolanacearum GMI1000	70.096	88.102	0.618
recA	Streptococcus mitis SK321	61.988	96.884	0.601
recA	Streptococcus pneumoniae R6	61.047	97.45	0.595
recA	Streptococcus mitis NCTC 12261	61.404	96.884	0.595
recA	Streptococcus pneumoniae D39	61.047	97.45	0.595
recA	Streptococcus pneumoniae TIGR4	61.047	97.45	0.595
recA	Streptococcus pneumoniae Rx1	61.047	97.45	0.595
recA	Streptococcus pyogenes NZ131	57.778	100	0.589
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.963	91.785	0.578
recA	Helicobacter pylori strain NCTC11637	62.617	90.935	0.569
recA	Streptococcus mutans UA159	61.92	91.501	0.567
recA	Lactococcus lactis subsp. cremoris KW2	60.79	93.201	0.567
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.79	93.201	0.567
recA	Helicobacter pylori 26695	62.305	90.935	0.567
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	90.935	0.564
recA	Latilactobacillus sakei subsp. sakei 23K	61.25	90.652	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.282	92.351	0.538