Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CEP86_RS01755 | Genome accession | NZ_CP022097 |
| Coordinates | 371269..372321 (-) | Length | 350 a.a. |
| NCBI ID | WP_011059579.1 | Uniprot ID | A0A2C9EHI1 |
| Organism | Pseudomonas protegens strain FDAARGOS_307 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 371269..399803 | 371269..372321 | within | 0 |
Gene organization within MGE regions
Location: 371269..399803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP86_RS01755 (CEP86_01760) | recA | 371269..372321 (-) | 1053 | WP_011059579.1 | recombinase RecA | Machinery gene |
| CEP86_RS01760 (CEP86_01765) | - | 372405..372905 (-) | 501 | WP_011059578.1 | CinA family protein | - |
| CEP86_RS01765 (CEP86_01770) | - | 373206..374048 (-) | 843 | WP_011059577.1 | putidacin L1 family lectin-like bacteriocin | - |
| CEP86_RS01770 (CEP86_01775) | - | 374057..374242 (-) | 186 | WP_080512171.1 | Com family DNA-binding transcriptional regulator | - |
| CEP86_RS01775 (CEP86_01780) | - | 374316..374831 (-) | 516 | WP_011059576.1 | hypothetical protein | - |
| CEP86_RS01780 (CEP86_01785) | - | 374939..375502 (-) | 564 | WP_011059575.1 | glycoside hydrolase family 19 protein | - |
| CEP86_RS01785 (CEP86_01790) | - | 375553..375930 (-) | 378 | WP_011059574.1 | phage tail assembly chaperone | - |
| CEP86_RS01790 (CEP86_01795) | - | 376226..377036 (-) | 811 | Protein_356 | phage tail protein | - |
| CEP86_RS01795 (CEP86_01800) | - | 377052..377651 (-) | 600 | WP_011059572.1 | YmfQ family protein | - |
| CEP86_RS01800 (CEP86_01805) | - | 377639..378679 (-) | 1041 | WP_011059571.1 | baseplate J/gp47 family protein | - |
| CEP86_RS01805 (CEP86_01810) | - | 378669..379067 (-) | 399 | WP_011059570.1 | phage GP46 family protein | - |
| CEP86_RS01810 (CEP86_01815) | - | 379070..379576 (-) | 507 | WP_011059569.1 | phage baseplate assembly protein V | - |
| CEP86_RS01815 (CEP86_01820) | - | 379686..380726 (-) | 1041 | WP_011059568.1 | phage baseplate assembly protein | - |
| CEP86_RS01820 (CEP86_01825) | - | 380730..381974 (-) | 1245 | WP_011059567.1 | DNA circularization protein | - |
| CEP86_RS01825 (CEP86_01830) | - | 381964..383562 (-) | 1599 | WP_011059566.1 | tail protein | - |
| CEP86_RS01830 (CEP86_01835) | - | 383693..383989 (-) | 297 | WP_011059565.1 | phage tail assembly protein | - |
| CEP86_RS01835 (CEP86_01840) | - | 383986..384333 (-) | 348 | WP_011059564.1 | phage tail tube protein | - |
| CEP86_RS01840 (CEP86_01845) | - | 384400..385896 (-) | 1497 | WP_011059563.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CEP86_RS01845 (CEP86_01850) | - | 385896..386078 (-) | 183 | WP_011059562.1 | DUF2635 domain-containing protein | - |
| CEP86_RS01850 (CEP86_01855) | - | 386075..386656 (-) | 582 | WP_011059561.1 | hypothetical protein | - |
| CEP86_RS01855 (CEP86_01860) | - | 386814..387950 (-) | 1137 | WP_011059560.1 | glycosyl hydrolase family 18 protein | - |
| CEP86_RS01860 (CEP86_01865) | - | 388000..388317 (-) | 318 | Protein_370 | late control protein | - |
| CEP86_RS01865 (CEP86_01870) | - | 388416..388766 (-) | 351 | WP_011059558.1 | phage holin family protein | - |
| CEP86_RS01870 (CEP86_01875) | - | 389284..390030 (-) | 747 | WP_041774082.1 | XRE family transcriptional regulator | - |
| CEP86_RS01875 (CEP86_01880) | mutS | 390217..392796 (+) | 2580 | WP_011059556.1 | DNA mismatch repair protein MutS | - |
| CEP86_RS01880 (CEP86_01885) | fdxA | 392940..393263 (+) | 324 | WP_011059555.1 | ferredoxin FdxA | - |
| CEP86_RS01885 (CEP86_01890) | rpoS | 393776..394783 (-) | 1008 | WP_011059554.1 | RNA polymerase sigma factor RpoS | - |
| CEP86_RS01890 (CEP86_01895) | - | 394890..395750 (-) | 861 | WP_011059553.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| CEP86_RS01895 (CEP86_01900) | - | 395963..396598 (-) | 636 | WP_169892832.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| CEP86_RS01900 (CEP86_01905) | surE | 396640..397389 (-) | 750 | WP_011059551.1 | 5'/3'-nucleotidase SurE | - |
| CEP86_RS01905 (CEP86_01910) | truD | 397377..398435 (-) | 1059 | WP_011059550.1 | tRNA pseudouridine(13) synthase TruD | - |
| CEP86_RS01910 (CEP86_01915) | ispF | 398432..398905 (-) | 474 | WP_011059549.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| CEP86_RS01915 (CEP86_01920) | fghA | 398958..399803 (-) | 846 | WP_011059548.1 | S-formylglutathione hydrolase | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37462.95 Da Isoelectric Point: 5.5108
>NTDB_id=236666 CEP86_RS01755 WP_011059579.1 371269..372321(-) (recA) [Pseudomonas protegens strain FDAARGOS_307]
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVAPPFRQAEFQILYGKGIYLNGEIIDLGVLHGFLEKSGAWYSYQGNKIGQGKANSAKFLQDNPEIGNALEK
QIREKLLTASPDVKANPVKETEDDMADADI
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVAPPFRQAEFQILYGKGIYLNGEIIDLGVLHGFLEKSGAWYSYQGNKIGQGKANSAKFLQDNPEIGNALEK
QIREKLLTASPDVKANPVKETEDDMADADI
Nucleotide
Download Length: 1053 bp
>NTDB_id=236666 CEP86_RS01755 WP_011059579.1 371269..372321(-) (recA) [Pseudomonas protegens strain FDAARGOS_307]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCCATTTCCACCGGCTCTCTGGGTCTGGACATTGCTCTGGGCATTGGCG
GTCTGCCAAAAGGCCGTATCGTTGAAATCTACGGCCCTGAGTCGTCCGGTAAAACTACCCTGACTCTGTCGGTTATTGCC
CAGGCGCAGAAAGCCGGTGCCACTTGTGCGTTCGTCGATGCCGAGCACGCACTGGATCCGGAATACGCCGGCAAGCTGGG
TGTGAATGTTGACGACCTGCTGGTTTCCCAGCCGGACACCGGCGAACAGGCCCTGGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTTGACGTGATCATCGTCGACTCCGTGGCGGCCCTGGTGCCCAAGGCTGAAATCGAAGGTGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGCAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTGAAGGAAGGCGACGAAGTGGTGGGCAGTGAA
ACCCGGGTCAAGATCGTCAAGAACAAGGTGGCTCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAACGGTGAAATCATCGATCTGGGCGTGCTGCACGGCTTCCTGGAGAAATCCGGTGCCTGGTACAGCTACCAGG
GCAACAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGCAGGACAACCCGGAAATCGGCAACGCGCTGGAGAAG
CAGATCCGTGAAAAACTGCTGACTGCATCGCCAGACGTCAAAGCCAACCCGGTCAAAGAGACCGAAGACGATATGGCCGA
CGCTGATATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCCATTTCCACCGGCTCTCTGGGTCTGGACATTGCTCTGGGCATTGGCG
GTCTGCCAAAAGGCCGTATCGTTGAAATCTACGGCCCTGAGTCGTCCGGTAAAACTACCCTGACTCTGTCGGTTATTGCC
CAGGCGCAGAAAGCCGGTGCCACTTGTGCGTTCGTCGATGCCGAGCACGCACTGGATCCGGAATACGCCGGCAAGCTGGG
TGTGAATGTTGACGACCTGCTGGTTTCCCAGCCGGACACCGGCGAACAGGCCCTGGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTTGACGTGATCATCGTCGACTCCGTGGCGGCCCTGGTGCCCAAGGCTGAAATCGAAGGTGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGCAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTGAAGGAAGGCGACGAAGTGGTGGGCAGTGAA
ACCCGGGTCAAGATCGTCAAGAACAAGGTGGCTCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAACGGTGAAATCATCGATCTGGGCGTGCTGCACGGCTTCCTGGAGAAATCCGGTGCCTGGTACAGCTACCAGG
GCAACAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGCAGGACAACCCGGAAATCGGCAACGCGCTGGAGAAG
CAGATCCGTGAAAAACTGCTGACTGCATCGCCAGACGTCAAAGCCAACCCGGTCAAAGAGACCGAAGACGATATGGCCGA
CGCTGATATCTGA
Similar proteins
Only experimentally validated proteins are listed.