Detailed information NTG0232259

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CCX87_RS17915
• Genome accession: NZ_CP021648
• Coordinates: 3853759..3854856 (-)
• Length: 365 a.a.
• NCBI ID: WP_087748465.1
• Uniprot ID: -
• Organism: Acidovorax sp. T1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3848759..3859856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCX87_RS17895	-	3849681..3850445 (+)	765	WP_087747921.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
CCX87_RS17900	-	3850639..3851796 (+)	1158	WP_087747922.1	diguanylate cyclase	-
CCX87_RS17905	-	3851919..3852983 (-)	1065	WP_232476568.1	IS630 family transposase	-
CCX87_RS17910	recX	3853191..3853652 (-)	462	WP_087747923.1	recombination regulator RecX	-
CCX87_RS17915	recA	3853759..3854856 (-)	1098	WP_087748465.1	recombinase RecA	Machinery gene
CCX87_RS17920	-	3854997..3855515 (+)	519	WP_087747924.1	MarR family winged helix-turn-helix transcriptional regulator	-
CCX87_RS17925	-	3855491..3856453 (-)	963	WP_087747925.1	LysR substrate-binding domain-containing protein	-
CCX87_RS17930	-	3856565..3857530 (+)	966	WP_087747926.1	tripartite tricarboxylate transporter substrate binding protein BugE	-
CCX87_RS17935	-	3857647..3858576 (+)	930	WP_087747927.1	N-formylglutamate amidohydrolase	-
CCX87_RS17940	-	3858702..3859376 (+)	675	WP_087747928.1	response regulator transcription factor	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 38916.80 Da
• Isoelectric Point: 5.2125

>NTDB_id=232259 CCX87_RS17915 WP_087748465.1 3853759..3854856(-) (recA) [Acidovorax sp. T1]
MDVAVKGTNPALPVNTEKAKALAAALAQIEKQFGKGTIMRLGEGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP
ESSGKTTLTLQVIAEMQKQGGTCAFVDAEHALDVQYAQKLGVQLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVIDSVA
ALTPKAEIEGEMGDSLPGLQARLMSQALRKLTSTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR
TGTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIVEKAGAWYAYNGEKIGQGRDNARE
FLRENPDLAREIENKVRDSLGIALLPAALEAAPAGKPAKAEKEDK

Nucleotide

• Length: 1098 bp

>NTDB_id=232259 CCX87_RS17915 WP_087748465.1 3853759..3854856(-) (recA) [Acidovorax sp. T1]
ATGGACGTCGCAGTCAAAGGCACCAACCCCGCATTGCCCGTGAACACCGAAAAGGCCAAGGCCCTGGCCGCCGCGCTCGC
CCAGATCGAGAAGCAATTTGGCAAGGGCACCATCATGCGCCTGGGCGAAGGCGAGGTGATCGAGGACATCCAGGTCGTCT
CCACTGGCTCGCTGGGCCTCGATATCGCGCTGGGTGTAGGTGGCCTGCCGCGCGGCCGTGTGGTTGAAATTTATGGCCCG
GAATCCTCGGGCAAGACCACGCTCACGCTGCAGGTGATTGCCGAGATGCAAAAGCAGGGCGGCACCTGCGCGTTCGTCGA
TGCCGAGCACGCGCTCGATGTGCAATACGCCCAGAAGCTCGGCGTGCAGCTGTCCGATTTGCTCATCAGCCAGCCCGACA
CCGGCGAGCAGGCGCTCGAAATCGTGGACAGCCTGGTGCGCTCGGGCGCGGTGGACCTGATCGTCATCGACTCGGTGGCT
GCCCTCACCCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACAGCCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGC
GCTGCGCAAGCTGACCTCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCG
TGATGTTCGGCAGCCCTGAAACGACGACCGGCGGCAATGCGCTCAAGTTCTACGCCTCGGTGCGCCTGGATATCCGCCGC
ACCGGCACCATCAAGAAGGGCGACGAAGCCATCGGCAACGAAACCAAGGTCAAGGTGGTCAAGAACAAGGTGAGCCCGCC
CTTCAAGACGGCCGAGTTCGACATTTTGTTTGGTGAAGGCATCAGCCGCGAGGGCGAGATCATCGACATGGGCGTGAACG
CCAAGATCGTCGAGAAGGCCGGCGCCTGGTATGCCTACAACGGCGAAAAAATCGGCCAGGGCCGCGACAACGCCCGCGAG
TTCCTGCGCGAAAACCCCGACCTGGCCCGCGAGATCGAAAACAAGGTGCGCGACAGCCTGGGCATCGCCCTGCTGCCCGC
CGCGCTGGAAGCCGCGCCCGCCGGCAAGCCCGCCAAAGCCGAGAAGGAAGACAAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.699	87.397	0.732
recA	Pseudomonas stutzeri DSM 10701	72.477	89.589	0.649
recA	Neisseria gonorrhoeae MS11	70.997	90.685	0.644
recA	Neisseria gonorrhoeae strain FA1090	70.997	90.685	0.644
recA	Neisseria gonorrhoeae MS11	70.997	90.685	0.644
recA	Acinetobacter baylyi ADP1	71.56	89.589	0.641
recA	Acinetobacter baumannii D1279779	70.948	89.589	0.636
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.031	89.589	0.627
recA	Vibrio cholerae strain A1552	70.031	89.589	0.627
recA	Glaesserella parasuis strain SC1401	70.37	88.767	0.625
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.372	90.685	0.611
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.273	90.411	0.608
recA	Helicobacter pylori 26695	64.35	90.685	0.584
recA	Helicobacter pylori strain NCTC11637	64.35	90.685	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	64.22	89.589	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	63.03	90.411	0.57
recA	Streptococcus mutans UA159	58.357	96.712	0.564
recA	Lactococcus lactis subsp. cremoris KW2	61.818	90.411	0.559
recA	Streptococcus pyogenes NZ131	61.398	90.137	0.553
recA	Streptococcus pneumoniae D39	60.303	90.411	0.545
recA	Streptococcus pneumoniae TIGR4	60.303	90.411	0.545
recA	Streptococcus pneumoniae Rx1	60.303	90.411	0.545
recA	Streptococcus pneumoniae R6	60.303	90.411	0.545
recA	Streptococcus mitis NCTC 12261	60	90.411	0.542
recA	Streptococcus mitis SK321	60	90.411	0.542
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	87.945	0.532