Detailed information NTG0230925

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: S101174_RS04385
• Genome accession: NZ_CP021479
• Coordinates: 875996..877129 (+)
• Length: 377 a.a.
• NCBI ID: WP_043023201.1
• Uniprot ID: A0AAJ5K5K5
• Organism: Levilactobacillus brevis strain SRCM101174
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	877245..878507	875996..877129	flank	116

Gene organization within MGE regions

Location: 875996..878507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101174_RS04385 (S101174_00884)	recA	875996..877129 (+)	1134	WP_043023201.1	recombinase RecA	Machinery gene
S101174_RS04390 (S101174_00885)	-	877245..878507 (-)	1263	WP_035465312.1	ISL3 family transposase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40350.74 Da
• Isoelectric Point: 5.3901

>NTDB_id=230925 S101174_RS04385 WP_043023201.1 875996..877129(+) (recA) [Levilactobacillus brevis strain SRCM101174]
MADERQAALDKALKKIEKDFGKGSIMRLGDNSNLEVETVPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENALDPAYATALGVNIDDLLLSQPDTGEQGLQIADALISSGAIDIVVVDSVAALVPRAEIEGEMGD
AHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQIKDGTDVIGNR
TRIKVVKNKVAPPFKRAEVDIMYGQGISQTGELLDMAVEKDIVDKSGSWYSYGEDRIGQGRENAKQYLADHPDMMAEVNQ
RVRAAYGVGDEEAAATKATETKTDAPKDKDKGKTKAKDKPADVTPGQIELAPDKSTK

Nucleotide

• Length: 1134 bp

>NTDB_id=230925 S101174_RS04385 WP_043023201.1 875996..877129(+) (recA) [Levilactobacillus brevis strain SRCM101174]
ATGGCTGACGAACGACAAGCGGCGCTGGATAAAGCGCTGAAGAAGATTGAAAAAGACTTTGGTAAAGGCTCGATTATGCG
ATTAGGGGACAATAGTAACCTCGAAGTTGAGACCGTACCATCAGGCTCGTTAGCACTTGACGTTGCCTTGGGTGTCGGCG
GTTACCCTCGCGGACGGATTGTAGAAATTTATGGTCCAGAATCTTCTGGGAAGACGACCGTTGCTCTGCACGCAGTTGCC
GAGGTCCAAAAACGTGGTGGAACAGCCGCCTATATTGATGCTGAAAATGCGTTGGATCCAGCCTATGCAACGGCATTAGG
GGTTAACATTGATGATTTATTGCTGTCACAGCCAGATACTGGGGAACAAGGCTTGCAAATCGCTGATGCCTTGATTTCCA
GTGGTGCGATTGACATTGTCGTGGTTGATTCCGTGGCAGCCTTAGTGCCACGTGCTGAAATTGAAGGCGAAATGGGTGAT
GCTCACGTGGGTCTGCAAGCCCGGTTGATGTCACAAGCCTTACGGAAGCTATCTGGGACTATCAATAAAACGAAGACAAT
CGCGTTATTTATCAATCAGATTCGGGAAAAAGTTGGTGTGATGTTTGGTAATCCAGAGACCACACCAGGTGGCCGGGCAC
TGAAATTCTATGCGACAGTGCGGTTAGAGGTACGACGGGCCGAACAGATTAAAGATGGCACGGATGTTATCGGTAACCGG
ACGCGAATCAAGGTCGTTAAGAACAAGGTTGCGCCGCCATTTAAACGGGCCGAGGTTGATATCATGTACGGGCAAGGAAT
CTCACAAACCGGTGAATTGCTCGACATGGCGGTTGAAAAAGATATCGTTGATAAAAGCGGTTCTTGGTATTCTTATGGTG
AAGACCGAATTGGTCAGGGTCGAGAGAATGCTAAACAGTACTTGGCAGATCATCCAGATATGATGGCCGAAGTTAATCAA
CGTGTCCGGGCTGCTTACGGTGTTGGCGATGAAGAAGCCGCAGCGACTAAAGCAACTGAGACGAAGACTGATGCGCCTAA
AGACAAGGATAAAGGGAAGACAAAGGCTAAAGATAAACCGGCCGATGTTACTCCTGGTCAGATTGAGTTAGCACCAGACA
AATCAACTAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	83.908	92.308	0.775
recA	Bacillus subtilis subsp. subtilis str. 168	75.61	87.003	0.658
recA	Streptococcus pneumoniae D39	68.946	93.103	0.642
recA	Streptococcus pneumoniae R6	68.946	93.103	0.642
recA	Streptococcus pneumoniae TIGR4	68.946	93.103	0.642
recA	Streptococcus pneumoniae Rx1	68.946	93.103	0.642
recA	Streptococcus mitis SK321	70.554	90.981	0.642
recA	Streptococcus mitis NCTC 12261	70.175	90.716	0.637
recA	Streptococcus mutans UA159	66.947	94.695	0.634
recA	Streptococcus pyogenes NZ131	70.997	87.798	0.623
recA	Lactococcus lactis subsp. cremoris KW2	69.94	89.125	0.623
recA	Neisseria gonorrhoeae MS11	60.057	92.308	0.554
recA	Neisseria gonorrhoeae MS11	60.057	92.308	0.554
recA	Neisseria gonorrhoeae strain FA1090	60.057	92.308	0.554
recA	Ralstonia pseudosolanacearum GMI1000	62.918	87.268	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.424	87.533	0.546
recA	Vibrio cholerae strain A1552	62.539	85.676	0.536
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.539	85.676	0.536
recA	Pseudomonas stutzeri DSM 10701	57.971	91.512	0.531
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.162	86.737	0.531
recA	Acinetobacter baylyi ADP1	61.61	85.676	0.528
recA	Acinetobacter baumannii D1279779	60.681	85.676	0.52
recA	Glaesserella parasuis strain SC1401	60.125	85.146	0.512
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.359	87.268	0.509
recA	Helicobacter pylori 26695	56.97	87.533	0.499
recA	Helicobacter pylori strain NCTC11637	56.97	87.533	0.499