Detailed information NTG0230336

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CBR65_RS21365
• Genome accession: NZ_CP021382
• Coordinates: 5125295..5126338 (+)
• Length: 347 a.a.
• NCBI ID: WP_087468738.1
• Uniprot ID: A0A1Y0G3I4
• Organism: Cellvibrio sp. PSBB006
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5120295..5131338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CBR65_RS21350 (CBR65_21325)	fdxA	5121370..5121693 (-)	324	WP_087468735.1	ferredoxin FdxA	-
CBR65_RS21355 (CBR65_21330)	mutS	5121839..5124460 (-)	2622	WP_087468736.1	DNA mismatch repair protein MutS	-
CBR65_RS21360 (CBR65_21335)	-	5124661..5125173 (+)	513	WP_087468737.1	CinA family protein	-
CBR65_RS21365 (CBR65_21340)	recA	5125295..5126338 (+)	1044	WP_087468738.1	recombinase RecA	Machinery gene
CBR65_RS21370 (CBR65_21345)	-	5126616..5127191 (+)	576	WP_087468739.1	DUF4136 domain-containing protein	-
CBR65_RS21375 (CBR65_21350)	-	5127264..5127716 (+)	453	WP_198300837.1	regulatory protein RecX	-
CBR65_RS21380 (CBR65_21355)	-	5128004..5129083 (+)	1080	WP_232461276.1	efflux RND transporter periplasmic adaptor subunit	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37427.98 Da
• Isoelectric Point: 5.3204

>NTDB_id=230336 CBR65_RS21365 WP_087468738.1 5125295..5126338(+) (recA) [Cellvibrio sp. PSBB006]
MDANKEKALQAALSQIERQFGKGTVMRMGDREQVAIPAISTGSLGLDVALGIGGLPKGRIIEIYGPESSGKTTLTLQVIA
EAQRQGGNCAFIDAEHALDPIYAAKLGVKVEDLIISQPDTGEQALEVTDMLVRSGAVDVLVVDSVAALTPRAEIEGEMGD
HHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGEEVIGSE
TRVKVVKNKVAPPFKQAEFQILYGSGINRMGEIVDYGVKLGMVDKAGAWYSYQGNKIGQGKNNVMKFLQENPEIAKELEQ
KVRAELLNTPQLSLGTSADSEDEVEMS

Nucleotide

• Length: 1044 bp

>NTDB_id=230336 CBR65_RS21365 WP_087468738.1 5125295..5126338(+) (recA) [Cellvibrio sp. PSBB006]
ATGGATGCGAATAAAGAAAAGGCGCTACAAGCAGCCCTGAGTCAAATCGAACGTCAATTTGGTAAGGGTACTGTGATGCG
CATGGGCGACCGGGAGCAGGTTGCCATTCCAGCGATTTCTACGGGTTCACTGGGGCTGGATGTAGCACTGGGAATCGGTG
GTTTGCCCAAAGGCCGGATTATTGAAATTTATGGGCCGGAATCTTCCGGTAAAACAACCCTGACTTTACAGGTTATCGCC
GAAGCTCAAAGGCAAGGCGGTAACTGCGCTTTTATCGACGCGGAGCACGCGCTTGATCCGATTTATGCCGCCAAGCTTGG
CGTTAAAGTGGAAGACCTGATTATTTCCCAGCCGGACACCGGCGAGCAGGCTCTGGAAGTGACCGATATGCTGGTGCGCT
CCGGTGCGGTGGATGTATTGGTTGTGGACTCTGTAGCTGCACTGACGCCCCGTGCGGAAATTGAAGGCGAAATGGGTGAT
CACCACGTCGGTTTGCAGGCGCGTTTGATGTCACAAGCCTTGCGTAAAATCACCGGTAATATCAAAAATGCTAACTGTCT
GGTGATCTTCATCAACCAGATCCGGATGAAGATCGGTGTTATGTTTGGTAACCCGGAAACCACTACTGGTGGTAATGCGC
TGAAATTTTATGCTTCAGTGCGTCTGGATATTCGCCGTATTGGTGCTGTAAAAGAAGGCGAAGAAGTGATCGGTTCCGAA
ACGCGCGTAAAAGTGGTGAAGAACAAGGTTGCTCCACCCTTCAAGCAGGCGGAATTCCAGATCCTGTACGGCAGCGGCAT
CAACCGTATGGGTGAGATTGTCGACTATGGAGTCAAGCTTGGCATGGTTGACAAGGCAGGAGCCTGGTATAGCTACCAGG
GCAATAAGATTGGCCAGGGTAAAAACAATGTCATGAAATTTCTGCAGGAAAATCCGGAGATCGCCAAAGAGCTGGAGCAG
AAGGTTCGGGCCGAACTCCTTAACACACCGCAGTTGTCGCTCGGCACCAGCGCTGACTCAGAAGATGAAGTAGAAATGTC
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A1Y0G3I4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	80.851	94.813	0.767
recA	Acinetobacter baylyi ADP1	72.832	99.712	0.726
recA	Acinetobacter baumannii D1279779	76.292	94.813	0.723
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.605	100	0.706
recA	Vibrio cholerae strain A1552	70.605	100	0.706
recA	Ralstonia pseudosolanacearum GMI1000	70.554	98.847	0.697
recA	Glaesserella parasuis strain SC1401	69.971	98.847	0.692
recA	Neisseria gonorrhoeae strain FA1090	67.63	99.712	0.674
recA	Neisseria gonorrhoeae MS11	67.63	99.712	0.674
recA	Neisseria gonorrhoeae MS11	67.63	99.712	0.674
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.361	94.236	0.625
recA	Helicobacter pylori strain NCTC11637	65.123	93.372	0.608
recA	Helicobacter pylori 26695	64.506	93.372	0.602
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.222	94.813	0.599
recA	Streptococcus pneumoniae Rx1	57.349	100	0.573
recA	Streptococcus pneumoniae TIGR4	57.349	100	0.573
recA	Streptococcus pneumoniae R6	57.349	100	0.573
recA	Streptococcus pneumoniae D39	57.349	100	0.573
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	92.507	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	58.407	97.695	0.571
recA	Streptococcus mutans UA159	60.308	93.66	0.565
recA	Streptococcus mitis NCTC 12261	59.146	94.524	0.559
recA	Streptococcus pyogenes NZ131	59.202	93.948	0.556
recA	Streptococcus mitis SK321	58.841	94.524	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.966	93.084	0.53
recA	Lactococcus lactis subsp. cremoris KW2	55.215	93.948	0.519