Detailed information NTG0230217

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CBP36_RS18215
• Genome accession: NZ_CP021366
• Coordinates: 3913288..3914394 (+)
• Length: 368 a.a.
• NCBI ID: WP_086928868.1
• Uniprot ID: A0A240UHU0
• Organism: Acidovorax carolinensis strain P4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3908288..3919394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CBP36_RS18190 (CBP36_18185)	-	3908751..3909425 (-)	675	WP_086928417.1	response regulator transcription factor	-
CBP36_RS18195 (CBP36_18190)	-	3909550..3910479 (-)	930	WP_086928418.1	N-formylglutamate amidohydrolase	-
CBP36_RS18200 (CBP36_18195)	-	3910596..3911561 (-)	966	WP_086928419.1	tripartite tricarboxylate transporter substrate binding protein BugE	-
CBP36_RS18205 (CBP36_18200)	-	3911676..3912641 (+)	966	WP_086928420.1	LysR substrate-binding domain-containing protein	-
CBP36_RS18210 (CBP36_18205)	-	3912617..3913114 (-)	498	WP_418134846.1	MarR family winged helix-turn-helix transcriptional regulator	-
CBP36_RS18215 (CBP36_18210)	recA	3913288..3914394 (+)	1107	WP_086928868.1	recombinase RecA	Machinery gene
CBP36_RS18220 (CBP36_18215)	recX	3914506..3914967 (+)	462	WP_086913715.1	recombination regulator RecX	-
CBP36_RS18225 (CBP36_18220)	-	3915184..3916473 (+)	1290	WP_086928422.1	acyl-CoA dehydrogenase family protein	-
CBP36_RS18230 (CBP36_18225)	-	3916584..3917147 (+)	564	WP_157896763.1	DUF3617 domain-containing protein	-
CBP36_RS18235 (CBP36_18230)	-	3917161..3917478 (+)	318	WP_086928424.1	antibiotic biosynthesis monooxygenase family protein	-
CBP36_RS18240 (CBP36_18235)	-	3917500..3918243 (-)	744	WP_086928425.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39231.14 Da
• Isoelectric Point: 5.2266

>NTDB_id=230217 CBP36_RS18215 WP_086928868.1 3913288..3914394(+) (recA) [Acidovorax carolinensis strain P4]
MDVAVKGTNPALPVNTEKAKALAAALAQIEKQFGKGTIMRLGEGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP
ESSGKTTLTLQVIAEMQKQGGTCAFVDAEHALDVQYAQKLGVQLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVIDSVA
ALTPKAEIEGEMGDSLPGLQARLMSQALRKLTSTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR
TGTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIVEKAGAWYAYNGEKIGQGRDNARE
FLRENPDLAREIENKVRESLGIALLPAALEAAPAGKPGKAEKGEKEDK

Nucleotide

• Length: 1107 bp

>NTDB_id=230217 CBP36_RS18215 WP_086928868.1 3913288..3914394(+) (recA) [Acidovorax carolinensis strain P4]
ATGGACGTCGCAGTCAAAGGCACCAATCCCGCATTGCCCGTGAACACGGAAAAGGCCAAGGCCCTGGCCGCCGCGCTCGC
CCAGATCGAGAAGCAGTTTGGCAAGGGCACCATCATGCGCCTGGGCGAAGGCGAGGTGATCGAGGACATCCAGGTCGTCT
CCACCGGCTCGCTGGGCCTGGATATCGCGCTGGGCGTGGGCGGCCTGCCCCGTGGCCGCGTGGTCGAAATTTATGGCCCG
GAATCGTCGGGCAAGACCACACTCACACTGCAGGTGATTGCCGAGATGCAAAAGCAGGGCGGCACCTGCGCGTTTGTCGA
TGCCGAGCACGCGCTCGATGTGCAATACGCCCAGAAACTCGGCGTACAGTTGTCCGATTTGCTCATCAGCCAGCCCGACA
CCGGCGAGCAGGCGCTCGAAATCGTGGACAGCCTGGTGCGCTCGGGCGCCGTGGACCTGATCGTCATTGACTCGGTGGCC
GCCCTCACGCCCAAGGCCGAAATAGAAGGCGAAATGGGCGACAGCCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGC
GCTGCGCAAGCTGACCTCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCG
TGATGTTCGGCTCGCCTGAAACGACGACCGGCGGCAATGCTCTCAAGTTCTATGCGTCGGTGCGCCTGGATATCCGCCGC
ACCGGCACCATCAAGAAGGGCGACGAAGCCATCGGCAACGAAACCAAGGTGAAGGTGGTCAAGAACAAGGTGAGCCCGCC
CTTCAAGACGGCCGAGTTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGGCGTGAACG
CCAAGATCGTCGAAAAGGCCGGCGCCTGGTATGCCTACAACGGCGAAAAAATCGGCCAGGGCCGGGACAACGCGCGCGAG
TTCCTGCGCGAAAACCCCGACCTGGCCCGCGAGATCGAGAACAAGGTGCGCGAAAGCCTGGGCATTGCCCTGCTGCCAGC
CGCCCTGGAAGCCGCCCCCGCAGGCAAGCCCGGCAAGGCCGAGAAGGGCGAGAAAGAAGACAAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-282)

3D structure

• AlphaFold DB: A0A240UHU0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	84.013	86.685	0.728
recA	Pseudomonas stutzeri DSM 10701	72.477	88.859	0.644
recA	Neisseria gonorrhoeae MS11	70.997	89.946	0.639
recA	Neisseria gonorrhoeae MS11	70.997	89.946	0.639
recA	Neisseria gonorrhoeae strain FA1090	70.997	89.946	0.639
recA	Acinetobacter baylyi ADP1	71.865	88.859	0.639
recA	Acinetobacter baumannii D1279779	71.254	88.859	0.633
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.336	88.859	0.625
recA	Vibrio cholerae strain A1552	70.336	88.859	0.625
recA	Glaesserella parasuis strain SC1401	70.37	88.043	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.674	89.946	0.609
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.273	89.674	0.603
recA	Helicobacter pylori 26695	64.653	89.946	0.582
recA	Helicobacter pylori strain NCTC11637	64.653	89.946	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	88.859	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	63.03	89.674	0.565
recA	Lactococcus lactis subsp. cremoris KW2	61.818	89.674	0.554
recA	Streptococcus pyogenes NZ131	61.398	89.402	0.549
recA	Streptococcus mutans UA159	60.909	89.674	0.546
recA	Streptococcus pneumoniae D39	60.303	89.674	0.541
recA	Streptococcus pneumoniae TIGR4	60.303	89.674	0.541
recA	Streptococcus pneumoniae Rx1	60.303	89.674	0.541
recA	Streptococcus pneumoniae R6	60.303	89.674	0.541
recA	Streptococcus mitis SK321	60	89.674	0.538
recA	Streptococcus mitis NCTC 12261	60	89.674	0.538
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	87.228	0.527