Detailed information NTG0230166

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CBP33_RS17970
• Genome accession: NZ_CP021359
• Coordinates: 3826482..3827588 (+)
• Length: 368 a.a.
• NCBI ID: WP_086914255.1
• Uniprot ID: -
• Organism: Acidovorax carolinensis strain NA2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3821482..3832588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CBP33_RS17945 (CBP33_17940)	-	3821941..3822615 (-)	675	WP_086913711.1	response regulator transcription factor	-
CBP33_RS17950 (CBP33_17945)	-	3822750..3823679 (-)	930	WP_086913712.1	N-formylglutamate amidohydrolase	-
CBP33_RS17955 (CBP33_17950)	-	3823796..3824761 (-)	966	WP_086913713.1	tripartite tricarboxylate transporter substrate binding protein BugE	-
CBP33_RS17960 (CBP33_17955)	-	3824873..3825835 (+)	963	WP_086913714.1	LysR substrate-binding domain-containing protein	-
CBP33_RS17965 (CBP33_17960)	-	3825811..3826242 (-)	432	WP_236749280.1	MarR family winged helix-turn-helix transcriptional regulator	-
CBP33_RS17970 (CBP33_17965)	recA	3826482..3827588 (+)	1107	WP_086914255.1	recombinase RecA	Machinery gene
CBP33_RS17975 (CBP33_17970)	recX	3827700..3828161 (+)	462	WP_086913715.1	recombination regulator RecX	-
CBP33_RS17980 (CBP33_17975)	-	3828378..3829667 (+)	1290	WP_086913716.1	acyl-CoA dehydrogenase family protein	-
CBP33_RS17985 (CBP33_17980)	-	3829778..3830341 (+)	564	WP_157896614.1	DUF3617 domain-containing protein	-
CBP33_RS17990 (CBP33_17985)	-	3830343..3830660 (+)	318	WP_086913718.1	antibiotic biosynthesis monooxygenase family protein	-
CBP33_RS17995 (CBP33_17990)	-	3830680..3831423 (-)	744	WP_086913719.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39230.16 Da
• Isoelectric Point: 5.3959

>NTDB_id=230166 CBP33_RS17970 WP_086914255.1 3826482..3827588(+) (recA) [Acidovorax carolinensis strain NA2]
MDVAVKGTNPALPVNTEKAKALAAALAQIEKQFGKGTIMRLGEGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP
ESSGKTTLTLQVIAEMQKQGGTCAFVDAEHALDVQYAQKLGVQLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVIDSVA
ALTPKAEIEGEMGDSLPGLQARLMSQALRKLTSTIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR
TGTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIVEKAGAWYAYNGEKIGQGRDNARE
FLRENPNLAREIENKVRESLGIALLPAALEAAPAGKPGKAEKGEKEDK

Nucleotide

• Length: 1107 bp

>NTDB_id=230166 CBP33_RS17970 WP_086914255.1 3826482..3827588(+) (recA) [Acidovorax carolinensis strain NA2]
ATGGACGTCGCAGTCAAAGGCACCAATCCCGCATTGCCCGTGAACACGGAAAAGGCCAAGGCCCTGGCCGCCGCGCTCGC
CCAGATCGAGAAGCAGTTTGGCAAGGGCACCATCATGCGCCTGGGCGAAGGCGAGGTGATCGAGGACATCCAGGTCGTCT
CCACCGGCTCGCTGGGCCTGGATATCGCGCTGGGCGTGGGCGGCCTGCCCCGTGGCCGCGTGGTCGAAATTTATGGCCCG
GAATCCTCGGGCAAGACCACACTCACACTGCAGGTGATTGCCGAGATGCAAAAGCAGGGCGGCACCTGCGCGTTTGTCGA
TGCCGAGCACGCGCTCGATGTGCAATACGCCCAGAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA
CCGGCGAGCAGGCGCTCGAAATCGTGGACAGCCTGGTGCGCTCGGGCGCCGTGGACCTGATCGTCATCGACTCGGTGGCC
GCCCTCACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACAGCCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGC
GCTGCGCAAGCTGACCTCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCG
TGATGTTCGGCAGCCCTGAAACGACGACCGGCGGCAATGCGCTCAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGC
ACCGGCACCATCAAGAAGGGTGACGAAGCCATCGGCAACGAAACCAAGGTCAAGGTGGTCAAGAACAAGGTGAGCCCGCC
CTTCAAGACGGCCGAGTTCGACATTTTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGGCGTGAACG
CCAAGATCGTCGAAAAGGCCGGCGCCTGGTATGCCTACAACGGCGAAAAAATCGGCCAGGGCCGGGACAACGCGCGCGAG
TTCCTGCGCGAAAACCCCAACCTGGCCCGCGAGATCGAGAACAAGGTGCGCGAAAGCCTGGGCATTGCCCTGCTGCCAGC
CGCCCTGGAAGCCGCCCCCGCAGGCAAGCCCGGCAAGGCCGAGAAGGGCGAGAAAGAAGACAAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	84.013	86.685	0.728
recA	Pseudomonas stutzeri DSM 10701	72.477	88.859	0.644
recA	Neisseria gonorrhoeae MS11	70.997	89.946	0.639
recA	Neisseria gonorrhoeae strain FA1090	70.997	89.946	0.639
recA	Neisseria gonorrhoeae MS11	70.997	89.946	0.639
recA	Acinetobacter baylyi ADP1	71.865	88.859	0.639
recA	Acinetobacter baumannii D1279779	71.254	88.859	0.633
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.336	88.859	0.625
recA	Vibrio cholerae strain A1552	70.336	88.859	0.625
recA	Glaesserella parasuis strain SC1401	70.37	88.043	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.674	89.946	0.609
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.273	89.674	0.603
recA	Helicobacter pylori strain NCTC11637	64.653	89.946	0.582
recA	Helicobacter pylori 26695	64.653	89.946	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	64.22	88.859	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	62.727	89.674	0.562
recA	Lactococcus lactis subsp. cremoris KW2	61.515	89.674	0.552
recA	Streptococcus pyogenes NZ131	61.398	89.402	0.549
recA	Streptococcus mutans UA159	60.909	89.674	0.546
recA	Streptococcus pneumoniae D39	60.303	89.674	0.541
recA	Streptococcus pneumoniae TIGR4	60.303	89.674	0.541
recA	Streptococcus pneumoniae Rx1	60.303	89.674	0.541
recA	Streptococcus pneumoniae R6	60.303	89.674	0.541
recA	Streptococcus mitis NCTC 12261	60	89.674	0.538
recA	Streptococcus mitis SK321	60	89.674	0.538
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	87.228	0.527