Detailed information NTG0228502

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CAP31_RS04200
• Genome accession: NZ_CP021138
• Coordinates: 791353..792390 (+)
• Length: 345 a.a.
• NCBI ID: WP_087446393.1
• Uniprot ID: A0A1Y0G5M5
• Organism: Sulfuriferula sp. AH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 786353..797390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAP31_RS04165 (CAP31_04165)	-	786686..787282 (+)	597	WP_087446387.1	riboflavin synthase	-
CAP31_RS04170 (CAP31_04170)	ribBA	787279..788370 (+)	1092	WP_087446388.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
CAP31_RS04175 (CAP31_04175)	ribH	788421..788888 (+)	468	WP_087446389.1	6,7-dimethyl-8-ribityllumazine synthase	-
CAP31_RS04180 (CAP31_04180)	nusB	788885..789316 (+)	432	WP_087446390.1	transcription antitermination factor NusB	-
CAP31_RS04185 (CAP31_04185)	thiL	789313..790287 (+)	975	WP_369802439.1	thiamine-phosphate kinase	-
CAP31_RS04190 (CAP31_04190)	-	790268..790756 (+)	489	WP_087446391.1	phosphatidylglycerophosphatase A	-
CAP31_RS04195 (CAP31_04195)	-	790753..791247 (+)	495	WP_087446392.1	CinA family protein	-
CAP31_RS04200 (CAP31_04200)	recA	791353..792390 (+)	1038	WP_087446393.1	recombinase RecA	Machinery gene
CAP31_RS04205 (CAP31_04205)	recX	792402..792857 (+)	456	WP_087446394.1	recombination regulator RecX	-
CAP31_RS04210 (CAP31_04210)	-	792911..793444 (-)	534	WP_087446395.1	carboxymuconolactone decarboxylase family protein	-
CAP31_RS04215 (CAP31_04215)	-	793586..794200 (-)	615	WP_223247358.1	TetR/AcrR family transcriptional regulator	-
CAP31_RS04220 (CAP31_04220)	trmL	794269..794733 (-)	465	WP_087446396.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
CAP31_RS04225 (CAP31_04225)	gshA	794862..796139 (+)	1278	WP_087446397.1	glutamate--cysteine ligase	-
CAP31_RS04230 (CAP31_04230)	gshB	796136..797077 (+)	942	WP_087446398.1	glutathione synthase	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 36931.25 Da
• Isoelectric Point: 5.1686

>NTDB_id=228502 CAP31_RS04200 WP_087446393.1 791353..792390(+) (recA) [Sulfuriferula sp. AH1]
MDENRSKALAAALAQIEKSFGKGSIMRLGDGEVVNDVQVVSTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLTLQVI
AEMQKLDGTAAFIDAEHALDPQYAQKLGVNVGELLISQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGEEVVGS
ETRVKVVKNKVAPPFKQAEFDILYGEGISREGEIIELGVANKIVDKAGAWYAYNGEKIGQGKDNAREYLREHPEVAHEIE
NKVRAAIGIVPHTAIIGESVAIDDA

Nucleotide

• Length: 1038 bp

>NTDB_id=228502 CAP31_RS04200 WP_087446393.1 791353..792390(+) (recA) [Sulfuriferula sp. AH1]
ATGGACGAAAACAGAAGCAAAGCCCTCGCTGCAGCCCTGGCACAGATCGAAAAAAGCTTCGGTAAAGGCTCTATCATGCG
CCTGGGCGACGGTGAGGTGGTCAATGACGTTCAGGTGGTATCGACCGGCTCGCTGGGCCTGGATATCGCGCTGGGCGTAG
GTGGCTTGCCGCGTGGCCGCATCGTCGAAATCTACGGGCCGGAATCGTCCGGTAAAACCACGCTGACCTTGCAGGTGATT
GCCGAGATGCAGAAGCTGGACGGCACCGCGGCATTTATCGACGCTGAACACGCGCTGGACCCGCAATATGCGCAGAAGCT
GGGCGTGAACGTCGGCGAATTGCTGATTTCGCAACCGGATACTGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGC
GTTCCGGCTCGGTTGACATCGTGGTGGTGGACTCGGTCGCAGCGCTGACGCCGAAAGCCGAGATCGAAGGCGAGATGGGC
GATTCGCACATGGGCCTGCAGGCGCGGCTGATGAGCCAGGCGCTGCGCAAACTGACCGGCAATATCAAGCGCACCAATAC
GCTGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAACCCTGAAACCACGACCGGTGGCAATG
CGCTGAAATTCTACGCTTCCGTGCGTCTCGATATCCGCCGTACCGGCGCGATCAAGAAGGGCGAGGAAGTGGTTGGTTCG
GAAACCCGCGTCAAGGTCGTCAAAAACAAGGTCGCGCCGCCGTTCAAGCAGGCTGAATTCGACATCCTGTACGGCGAAGG
CATCTCCCGCGAAGGCGAGATCATCGAGCTTGGCGTCGCCAACAAGATTGTCGACAAGGCGGGTGCCTGGTATGCCTATA
ACGGCGAGAAGATCGGCCAGGGCAAGGATAACGCGCGCGAGTATCTGCGCGAACATCCGGAAGTCGCCCATGAAATCGAG
AACAAGGTGCGTGCCGCTATCGGTATCGTGCCGCACACCGCCATCATCGGCGAAAGCGTGGCCATCGACGACGCATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A1Y0G5M5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	80.625	92.754	0.748
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.754	100	0.728
recA	Vibrio cholerae strain A1552	72.754	100	0.728
recA	Pseudomonas stutzeri DSM 10701	76.147	94.783	0.722
recA	Neisseria gonorrhoeae strain FA1090	75	96.232	0.722
recA	Neisseria gonorrhoeae MS11	75	96.232	0.722
recA	Neisseria gonorrhoeae MS11	75	96.232	0.722
recA	Acinetobacter baumannii D1279779	74.383	93.913	0.699
recA	Acinetobacter baylyi ADP1	74.074	93.913	0.696
recA	Glaesserella parasuis strain SC1401	71.471	96.522	0.69
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.768	95.072	0.635
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.152	95.652	0.623
recA	Bacillus subtilis subsp. subtilis str. 168	65.951	94.493	0.623
recA	Latilactobacillus sakei subsp. sakei 23K	65.749	94.783	0.623
recA	Lactococcus lactis subsp. cremoris KW2	63.393	97.391	0.617
recA	Streptococcus pneumoniae D39	64.242	95.652	0.614
recA	Streptococcus pneumoniae Rx1	64.242	95.652	0.614
recA	Streptococcus pneumoniae R6	64.242	95.652	0.614
recA	Streptococcus pneumoniae TIGR4	64.242	95.652	0.614
recA	Helicobacter pylori strain NCTC11637	64.134	95.362	0.612
recA	Helicobacter pylori 26695	63.83	95.362	0.609
recA	Streptococcus mitis SK321	63.636	95.652	0.609
recA	Streptococcus pyogenes NZ131	63.636	95.652	0.609
recA	Streptococcus mutans UA159	62.952	96.232	0.606
recA	Streptococcus mitis NCTC 12261	63.333	95.652	0.606
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.497	94.493	0.6