Detailed information NTG0228179

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B7441_RS02885
• Genome accession: NZ_CP021104
• Coordinates: 607685..608746 (+)
• Length: 353 a.a.
• NCBI ID: WP_003686016.1
• Uniprot ID: A0A2V2D9T2
• Organism: Limosilactobacillus fermentum strain FTDC 8312
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 602685..613746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7441_RS02865	-	603268..604569 (+)	1302	WP_003682803.1	pitrilysin family protein	-
B7441_RS02870	-	604666..605670 (+)	1005	WP_035436991.1	RodZ domain-containing protein	-
B7441_RS02875	pgsA	605686..606270 (+)	585	WP_003682805.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
B7441_RS02880	-	606347..607591 (+)	1245	WP_003682806.1	competence/damage-inducible protein A	-
B7441_RS02885	recA	607685..608746 (+)	1062	WP_003686016.1	recombinase RecA	Machinery gene
B7441_RS02890	rny	609141..610700 (+)	1560	WP_012390969.1	ribonuclease Y	-
B7441_RS02895	mutS	610794..613436 (+)	2643	WP_012390970.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38141.24 Da
• Isoelectric Point: 4.9958

>NTDB_id=228179 B7441_RS02885 WP_003686016.1 607685..608746(+) (recA) [Limosilactobacillus fermentum strain FTDC 8312]
MADQRKAALDNALRKIEKNFGKGSIMRMGDAADTKIATISSGSLAIDEALGVGGYPRGRIIEMYGPESSGKTTVALHAVA
EVQRRGGTAAYIDAENALDPQYATALGVQINDLLLSQPDTGEQGLEIADALIASGAVDIVVVDSVAALVPRAEIEGEMGD
THVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTIRMEIRRGEQLKNGTDVIGNR
AKIKVVKNKVAPPFRKAEVDIMYGEGISKTGELLDMAVEKDLVNKSGAWYSYGNERIGQGRENAKQWFADHEDAMNELMN
KVRVAYGMEPDEAPATKEGEPQQETIEEASSDK

Nucleotide

• Length: 1062 bp

>NTDB_id=228179 B7441_RS02885 WP_003686016.1 607685..608746(+) (recA) [Limosilactobacillus fermentum strain FTDC 8312]
TTGGCAGATCAACGAAAAGCAGCCTTAGATAACGCCCTGCGTAAGATTGAAAAGAACTTTGGGAAGGGTTCGATCATGCG
GATGGGTGACGCCGCCGACACCAAGATTGCAACCATTTCCAGTGGCTCCTTAGCCATTGACGAAGCCCTCGGTGTAGGGG
GGTACCCACGGGGCCGAATCATTGAAATGTACGGTCCGGAAAGTTCCGGGAAGACGACCGTCGCTCTCCACGCCGTCGCT
GAAGTGCAACGCCGTGGGGGGACGGCCGCCTACATCGACGCCGAAAACGCCCTCGATCCCCAGTACGCTACCGCCCTGGG
GGTTCAAATTAACGACTTGCTCTTGTCCCAACCAGACACCGGTGAACAGGGGTTGGAAATTGCCGACGCCCTGATCGCTT
CGGGAGCCGTCGACATCGTGGTGGTTGACTCCGTGGCCGCCCTGGTTCCCCGGGCCGAAATCGAAGGGGAAATGGGGGAC
ACCCACGTGGGGTTACAGGCCCGCTTGATGTCCCAAGCCCTGCGGAAGCTTTCCGGGGAAATCAACAAGACCAAGACGAT
CGCCATCTTCATCAACCAAATCCGGGAAAAGGTGGGGGTGATGTTTGGGAACCCGGAAACCACCCCTGGTGGTCGGGCCC
TGAAGTTCTACTCAACCATTCGGATGGAAATCCGGCGCGGTGAACAACTGAAGAACGGGACCGATGTGATCGGGAACCGG
GCCAAGATTAAGGTCGTGAAGAACAAGGTGGCACCGCCGTTCCGCAAGGCCGAAGTAGACATCATGTATGGGGAAGGGAT
CTCCAAGACGGGGGAACTGCTCGATATGGCCGTCGAAAAGGACCTGGTCAACAAGTCCGGGGCCTGGTATTCTTATGGCA
ATGAACGGATTGGCCAAGGGCGTGAAAACGCCAAGCAGTGGTTTGCGGACCACGAAGACGCCATGAACGAGCTGATGAAC
AAGGTGCGGGTGGCCTACGGGATGGAACCGGACGAAGCGCCGGCCACCAAGGAAGGCGAACCGCAACAAGAAACGATTGA
AGAAGCGTCGAGTGACAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: A0A2V2D9T2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	81.176	96.317	0.782
recA	Bacillus subtilis subsp. subtilis str. 168	74.772	93.201	0.697
recA	Streptococcus mitis SK321	66.667	97.734	0.652
recA	Streptococcus mutans UA159	64.426	100	0.652
recA	Streptococcus mitis NCTC 12261	66.377	97.734	0.649
recA	Streptococcus pyogenes NZ131	68.278	93.768	0.64
recA	Streptococcus pneumoniae Rx1	68.085	93.201	0.635
recA	Streptococcus pneumoniae D39	68.085	93.201	0.635
recA	Streptococcus pneumoniae R6	68.085	93.201	0.635
recA	Streptococcus pneumoniae TIGR4	68.085	93.201	0.635
recA	Lactococcus lactis subsp. cremoris KW2	66.566	94.051	0.626
recA	Neisseria gonorrhoeae strain FA1090	60.909	93.484	0.569
recA	Neisseria gonorrhoeae MS11	60.909	93.484	0.569
recA	Neisseria gonorrhoeae MS11	60.909	93.484	0.569
recA	Ralstonia pseudosolanacearum GMI1000	63.492	89.235	0.567
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.939	92.635	0.555
recA	Glaesserella parasuis strain SC1401	55.114	99.717	0.55
recA	Helicobacter pylori 26695	57.27	95.467	0.547
recA	Helicobacter pylori strain NCTC11637	57.27	95.467	0.547
recA	Pseudomonas stutzeri DSM 10701	59.133	91.501	0.541
recA	Vibrio cholerae strain A1552	58.824	91.501	0.538
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.824	91.501	0.538
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.273	93.484	0.535
recA	Acinetobacter baumannii D1279779	57.895	91.501	0.53
recA	Acinetobacter baylyi ADP1	57.895	91.501	0.53
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.923	92.068	0.524