Detailed information NTG0228165

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DFI_RS08565
• Genome accession: NZ_CP021081
• Coordinates: 1755879..1756952 (+)
• Length: 357 a.a.
• NCBI ID: WP_022801718.1
• Uniprot ID: A0A221SWM7
• Organism: Deinococcus ficus strain CC-FR2-10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1750879..1761952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DFI_RS08540 (DFI_08560)	-	1751243..1752517 (-)	1275	WP_211235336.1	acetyl-CoA hydrolase/transferase family protein	-
DFI_RS08545 (DFI_08565)	pdxH	1752607..1753251 (+)	645	WP_027461791.1	pyridoxamine 5'-phosphate oxidase	-
DFI_RS08550 (DFI_08570)	-	1753318..1753680 (+)	363	WP_051307406.1	four-helix bundle copper-binding protein	-
DFI_RS08555 (DFI_08575)	-	1753832..1755037 (+)	1206	WP_027461793.1	CinA family nicotinamide mononucleotide deamidase-related protein	-
DFI_RS08560 (DFI_08580)	thpR	1755034..1755882 (+)	849	WP_081425668.1	RNA 2',3'-cyclic phosphodiesterase	-
DFI_RS08565 (DFI_08585)	recA	1755879..1756952 (+)	1074	WP_022801718.1	recombinase RecA	Machinery gene
DFI_RS08570 (DFI_08590)	-	1757013..1757501 (-)	489	WP_022801717.1	hypothetical protein	-
DFI_RS20940 (DFI_08595)	-	1757548..1759599 (-)	2052	WP_027461794.1	vWA domain-containing protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38051.77 Da
• Isoelectric Point: 5.5911

>NTDB_id=228165 DFI_RS08565 WP_022801718.1 1755879..1756952(+) (recA) [Deinococcus ficus strain CC-FR2-10]
MSKNDPKEAVSHVTDGKERMKAIETAMSQIEKQFGKGSIMKLGAESKLDVQVVSTGSLSLDLALGVGGIPRGRITEIYGP
ESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAIDVVVVDSVA
ALTPRAEIEGEMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREKIGVMYGNPETTTGGRALKFYASVRLDVRK
IGQPVKMGNDAVGNTVKVKTVKNKVAPPFKEVELTLMYGKGFDQLSDLVTLASDMDIVKKAGSFYSYGDERIGQGKEKAI
AYIAERPEMEDEIRQKVMQAIRGGTAPEIPSNPALAE

Nucleotide

• Length: 1074 bp

>NTDB_id=228165 DFI_RS08565 WP_022801718.1 1755879..1756952(+) (recA) [Deinococcus ficus strain CC-FR2-10]
ATGAGCAAGAACGACCCGAAGGAAGCCGTGAGTCACGTGACGGACGGCAAGGAACGCATGAAGGCCATCGAGACGGCCAT
GAGTCAGATCGAGAAGCAGTTCGGCAAGGGCAGCATCATGAAGCTCGGTGCCGAAAGCAAACTCGACGTGCAGGTCGTCT
CCACCGGCAGCCTCAGCCTCGACCTCGCGCTCGGCGTGGGCGGCATTCCCCGCGGCCGCATCACCGAGATCTACGGCCCG
GAATCCGGCGGTAAGACCACCCTGGCCCTCGCCATCGTCGCGCAGGCCCAGAAGGCCGGCGGCACCTGCGCCTTCATCGA
CGCCGAACACGCCCTGGACCCCGTGTACGCCCGCGCGCTCGGCGTGAACACCGACGAACTCCTCGTCTCCCAGCCCGACA
ACGGCGAGCAGGCGCTGGAAATCATGGAACTCCTGGTCCGCAGCGGCGCCATCGACGTGGTCGTCGTGGACAGCGTGGCC
GCCCTGACGCCCCGCGCCGAAATCGAAGGGGAAATGGGCGACAGCCTCCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGC
GCTGCGCAAACTCACCGCGATCCTCTCTAAGACCGGCACCGCCGCCATCTTCATCAACCAGGTCCGCGAGAAGATCGGCG
TGATGTACGGCAACCCGGAAACCACCACCGGCGGCCGCGCCCTGAAGTTCTACGCCAGCGTGCGCCTGGACGTCCGCAAG
ATCGGCCAGCCCGTGAAGATGGGCAACGACGCCGTGGGCAACACCGTGAAGGTCAAGACCGTGAAGAACAAGGTCGCCCC
GCCCTTCAAGGAAGTCGAGTTGACCCTGATGTACGGCAAGGGTTTCGACCAGCTCAGCGACCTCGTGACCCTGGCGTCCG
ACATGGACATCGTGAAGAAGGCCGGCAGCTTCTACAGTTACGGCGACGAGCGCATCGGCCAGGGCAAGGAAAAAGCCATC
GCCTACATCGCCGAACGCCCGGAGATGGAAGACGAGATCCGCCAGAAGGTCATGCAGGCCATCCGCGGCGGCACCGCCCC
CGAGATCCCCAGCAACCCCGCCCTGGCGGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-282)

3D structure

• AlphaFold DB: A0A221SWM7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	91.884	96.639	0.888
recA	Streptococcus pneumoniae Rx1	65.538	91.036	0.597
recA	Streptococcus pneumoniae D39	65.538	91.036	0.597
recA	Streptococcus pneumoniae R6	65.538	91.036	0.597
recA	Streptococcus pneumoniae TIGR4	65.538	91.036	0.597
recA	Streptococcus mitis NCTC 12261	65.231	91.036	0.594
recA	Streptococcus mitis SK321	64.923	91.036	0.591
recA	Glaesserella parasuis strain SC1401	64.615	91.036	0.588
recA	Acinetobacter baumannii D1279779	64.308	91.036	0.585
recA	Acinetobacter baylyi ADP1	65.714	88.235	0.58
recA	Streptococcus pyogenes NZ131	63.385	91.036	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	61.934	92.717	0.574
recA	Streptococcus mutans UA159	62.462	91.036	0.569
recA	Bacillus subtilis subsp. subtilis str. 168	62.112	90.196	0.56
recA	Vibrio cholerae strain A1552	61.538	91.036	0.56
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.538	91.036	0.56
recA	Ralstonia pseudosolanacearum GMI1000	62.579	89.076	0.557
recA	Neisseria gonorrhoeae MS11	60.55	91.597	0.555
recA	Neisseria gonorrhoeae MS11	60.55	91.597	0.555
recA	Neisseria gonorrhoeae strain FA1090	60.55	91.597	0.555
recA	Lactococcus lactis subsp. cremoris KW2	60.061	91.877	0.552
recA	Helicobacter pylori strain NCTC11637	57.185	95.518	0.546
recA	Helicobacter pylori 26695	57.185	95.518	0.546
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.259	90.756	0.538
recA	Pseudomonas stutzeri DSM 10701	58.879	89.916	0.529
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.364	92.437	0.521