Detailed information NTG0228139

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ALFP_RS10490
• Genome accession: NZ_CP021079
• Coordinates: 2275494..2276576 (-)
• Length: 360 a.a.
• NCBI ID: WP_021446515.1
• Uniprot ID: U1ZS57
• Organism: Alcaligenes faecalis strain P156
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2270494..2281576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ALFP_RS10470 (ALFP_2102)	-	2270516..2271094 (-)	579	WP_042481115.1	DUF2889 domain-containing protein	-
ALFP_RS10475 (ALFP_2103)	metE	2271367..2273661 (-)	2295	WP_063690509.1	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	-
ALFP_RS10480 (ALFP_2104)	-	2273779..2274699 (+)	921	WP_042481121.1	LysR family transcriptional regulator	-
ALFP_RS10485 (ALFP_2105)	recX	2274862..2275410 (-)	549	WP_269848168.1	recombination regulator RecX	-
ALFP_RS10490 (ALFP_2106)	recA	2275494..2276576 (-)	1083	WP_021446515.1	recombinase RecA	Machinery gene
ALFP_RS10495 (ALFP_2108)	-	2276783..2277472 (+)	690	WP_003799515.1	response regulator transcription factor	-
ALFP_RS10500 (ALFP_2109)	-	2277483..2278940 (+)	1458	WP_042481130.1	sensor histidine kinase	-
ALFP_RS10505 (ALFP_2110)	-	2278945..2280618 (+)	1674	WP_063690514.1	MFS transporter	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 38749.42 Da
• Isoelectric Point: 5.5995

>NTDB_id=228139 ALFP_RS10490 WP_021446515.1 2275494..2276576(-) (recA) [Alcaligenes faecalis strain P156]
MDDKNSKAVASERSKALAAALSQIEKQFGKGSIMRYGDDNVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGK
TTLTLQVIAEMQKLKGTCAFIDAEHALDVQYAQKLGVNLGDLLISQPDTGEQALEITEALVRSGSVDLIVIDSVAALTPK
AEIEGDMGDSLPGLQARLMSQALRKLTATIKRANCMVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIK
RGDEMVGNETRVKVVKNKVAPPFKQTEFDIMYGSGISREGEIIDLGVQTGVVDKAGAWYSYDGNRIGQGKDNVREFLKER
PELAREIENKVREKLGVALMSAAVSRPAAAPVVDPAEGEV

Nucleotide

• Length: 1083 bp

>NTDB_id=228139 ALFP_RS10490 WP_021446515.1 2275494..2276576(-) (recA) [Alcaligenes faecalis strain P156]
ATGGACGATAAAAACAGCAAAGCAGTGGCCTCGGAACGTTCCAAAGCGCTGGCCGCCGCTCTGTCGCAAATCGAAAAGCA
GTTCGGCAAGGGCTCGATCATGCGTTATGGCGACGACAACGTCGAGCATGACATCCAGGTGGTCTCCACGGGTTCGCTGG
GTCTGGACATTGCTTTGGGCGTCGGTGGTCTGCCACGTGGTCGCGTTATTGAGATTTACGGCCCGGAGTCCTCGGGTAAA
ACCACGCTGACCCTGCAAGTGATTGCAGAAATGCAAAAGCTCAAAGGCACCTGCGCTTTTATTGATGCCGAGCACGCGCT
GGACGTGCAATACGCTCAAAAGCTGGGCGTGAACCTGGGCGATCTGCTGATCTCCCAGCCCGATACCGGTGAACAGGCTC
TGGAAATTACCGAAGCCCTGGTGCGTTCGGGTTCGGTAGACCTGATCGTTATCGACTCGGTTGCCGCCCTGACTCCCAAG
GCTGAAATCGAAGGCGATATGGGCGATTCCTTGCCCGGTCTGCAAGCTCGTCTGATGAGCCAAGCCCTGCGTAAATTGAC
GGCGACCATCAAGCGCGCCAATTGCATGGTTATCTTCATTAACCAGATTCGTATGAAGATTGGCGTCATGTTCGGCAACC
CTGAAACCACCACGGGTGGTAACGCACTGAAGTTTTACTCCTCTGTGCGTCTGGATATCCGCCGTATCGGTTCCATCAAG
CGTGGCGACGAAATGGTGGGTAACGAAACCCGCGTCAAAGTGGTCAAGAACAAGGTTGCGCCTCCCTTCAAGCAAACCGA
ATTCGACATCATGTACGGCAGCGGTATTTCCCGCGAAGGTGAGATTATCGATCTGGGCGTACAAACCGGTGTGGTCGACA
AGGCCGGTGCCTGGTATAGCTACGATGGCAACCGCATTGGCCAAGGTAAGGACAATGTGCGCGAATTCCTGAAAGAGCGC
CCCGAACTGGCCCGTGAAATCGAAAACAAGGTGCGCGAAAAACTGGGTGTTGCCCTGATGAGCGCTGCTGTCAGCCGCCC
AGCCGCTGCTCCTGTGGTTGATCCGGCCGAGGGAGAAGTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (15-277)

3D structure

• AlphaFold DB: U1ZS57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	81.525	94.722	0.772
recA	Pseudomonas stutzeri DSM 10701	70.145	95.833	0.672
recA	Acinetobacter baumannii D1279779	72.446	89.722	0.65
recA	Acinetobacter baylyi ADP1	71.827	89.722	0.644
recA	Neisseria gonorrhoeae MS11	69.789	91.944	0.642
recA	Neisseria gonorrhoeae MS11	69.789	91.944	0.642
recA	Neisseria gonorrhoeae strain FA1090	69.789	91.944	0.642
recA	Vibrio cholerae strain A1552	71.517	89.722	0.642
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.517	89.722	0.642
recA	Glaesserella parasuis strain SC1401	70.988	90	0.639
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.35	91.389	0.597
recA	Bacillus subtilis subsp. subtilis str. 168	65.138	90.833	0.592
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.742	91.389	0.592
recA	Helicobacter pylori 26695	63.939	91.667	0.586
recA	Helicobacter pylori strain NCTC11637	63.636	91.667	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.158	89.722	0.567
recA	Streptococcus pneumoniae D39	60.417	93.333	0.564
recA	Streptococcus pneumoniae Rx1	60.417	93.333	0.564
recA	Streptococcus pneumoniae R6	60.417	93.333	0.564
recA	Streptococcus pneumoniae TIGR4	60.417	93.333	0.564
recA	Latilactobacillus sakei subsp. sakei 23K	61.774	90.833	0.561
recA	Streptococcus mitis SK321	59.292	94.167	0.558
recA	Streptococcus mitis NCTC 12261	59.292	94.167	0.558
recA	Streptococcus pyogenes NZ131	59.403	93.056	0.553
recA	Streptococcus mutans UA159	58.929	93.333	0.55
recA	Lactococcus lactis subsp. cremoris KW2	56.637	94.167	0.533