Detailed information NTG0225683

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B7492_RS20115
• Genome accession: NZ_CP020743
• Coordinates: 3869280..3869705 (-)
• Length: 141 a.a.
• NCBI ID: WP_002111333.1
• Uniprot ID: A0A1W6ABW2
• Organism: Bacillus mycoides strain Gnyt1
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	3867786..3869248	3869280..3869705	flank	32

Gene organization within MGE regions

Location: 3867786..3869705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7492_RS20110 (B7492_20090)	-	3867786..3869248 (+)	1463	WP_407708113.1	IS1182 family transposase	-
B7492_RS20115 (B7492_20095)	recA	3869280..3869705 (-)	426	WP_002111333.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15991.81 Da
• Isoelectric Point: 4.9286

>NTDB_id=225683 B7492_RS20115 WP_002111333.1 3869280..3869705(-) (recA) [Bacillus mycoides strain Gnyt1]
MPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIV
QKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFVREHHGIGENSGVEDTEDSTRQD

Nucleotide

• Length: 426 bp

>NTDB_id=225683 B7492_RS20115 WP_002111333.1 3869280..3869705(-) (recA) [Bacillus mycoides strain Gnyt1]
GTGCCAGAAACAACTCCAGGTGGTCGTGCGTTGAAATTCTATTCAACTGTCCGTCTTGAAGTACGTCGTGCTGAGCAGTT
AAAGCAAGGTAACGATATTGTTGGTAATAAAACGAAAGTAAAAGTAGTTAAAAATAAAGTAGCACCGCCATTCCGTGTTG
CTGAAGTTGATATTATGTACGGAGAAGGTATTTCAAGAGAAGGTGAAATCTTAGATATGGCTTCTGAACTTGATATCGTT
CAAAAGAGCGGTGCTTGGTACTCTTATAATGAAGAACGCTTAGGACAAGGTCGTGAAAATTCGAAGCAATTCTTAAAAGA
GAATACGGATTTAAGAGAGGAAATTGCCTTCTTTGTTCGTGAACATCACGGAATTGGTGAAAACTCTGGTGTTGAAGACA
CGGAAGATTCAACTCGTCAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (2-65)

3D structure

• AlphaFold DB: A0A1W6ABW2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	79.231	92.199	0.73
recA	Latilactobacillus sakei subsp. sakei 23K	65.873	89.362	0.589
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.481	95.745	0.589
recA	Streptococcus pneumoniae TIGR4	56.738	100	0.567
recA	Streptococcus pneumoniae Rx1	56.738	100	0.567
recA	Streptococcus pneumoniae D39	56.738	100	0.567
recA	Streptococcus pneumoniae R6	56.738	100	0.567
recA	Ralstonia pseudosolanacearum GMI1000	63.71	87.943	0.56
recA	Streptococcus mutans UA159	55.714	99.291	0.553
recA	Helicobacter pylori 26695	60.63	90.071	0.546
recA	Helicobacter pylori strain NCTC11637	60.63	90.071	0.546
recA	Streptococcus pyogenes NZ131	60.63	90.071	0.546
recA	Neisseria gonorrhoeae MS11	55.474	97.163	0.539
recA	Neisseria gonorrhoeae MS11	55.474	97.163	0.539
recA	Neisseria gonorrhoeae strain FA1090	55.474	97.163	0.539
recA	Streptococcus mitis NCTC 12261	58.594	90.78	0.532
recA	Streptococcus mitis SK321	58.594	90.78	0.532
recA	Lactococcus lactis subsp. cremoris KW2	55.97	95.035	0.532
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.8	88.652	0.504
recA	Acinetobacter baumannii D1279779	50	99.291	0.496
recA	Glaesserella parasuis strain SC1401	50.376	94.326	0.475
recA	Acinetobacter baylyi ADP1	53.719	85.816	0.461
recA	Pseudomonas stutzeri DSM 10701	55.263	80.851	0.447
recA	Vibrio cholerae O1 biovar El Tor strain E7946	51.667	85.106	0.44
recA	Vibrio cholerae strain A1552	51.667	85.106	0.44
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	47.826	81.56	0.39