Detailed information NTG0225358

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B5M07_RS09640
• Genome accession: NZ_CP020694
• Coordinates: 1985021..1986091 (-)
• Length: 356 a.a.
• NCBI ID: WP_120351143.1
• Uniprot ID: -
• Organism: Sulfitobacter sp. D7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1980021..1991091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B5M07_RS09625 (B5M07_09640)	-	1981124..1981849 (-)	726	WP_120351140.1	phosphatase PAP2 family protein	-
B5M07_RS09630 (B5M07_09645)	-	1981932..1982219 (-)	288	WP_120351141.1	DUF1330 domain-containing protein	-
B5M07_RS09635 (B5M07_09650)	alaS	1982225..1984882 (-)	2658	WP_120351142.1	alanine--tRNA ligase	-
B5M07_RS09640 (B5M07_09655)	recA	1985021..1986091 (-)	1071	WP_120351143.1	recombinase RecA	Machinery gene
B5M07_RS09645 (B5M07_09660)	-	1986295..1986888 (+)	594	WP_120351144.1	gamma-glutamyl kinase	-
B5M07_RS09650 (B5M07_09665)	-	1986902..1989031 (-)	2130	WP_254693990.1	ATP-binding protein	-
B5M07_RS09655 (B5M07_09670)	-	1989312..1990472 (-)	1161	WP_120351146.1	RsmB/NOP family class I SAM-dependent RNA methyltransferase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 37897.34 Da
• Isoelectric Point: 4.9474

>NTDB_id=225358 B5M07_RS09640 WP_120351143.1 1985021..1986091(-) (recA) [Sulfitobacter sp. D7]
MATADLLTMDSKKTAEKQKALDSALAQIERQFGKGSIMKLGAEGAIQDIKASSTGSLGLDIALGIGGLPMGRIIEIYGPE
SSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPQYAKKLGVDIDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAA
LTPKSELEGEMGDSSVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GALKDRDEVVGNATKVKIVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVDKSGSWFSYGDERIGQGRENAKNF
LKQNTAMASEIEDKIRAAHGLDFEGSGGDDADILEA

Nucleotide

• Length: 1071 bp

>NTDB_id=225358 B5M07_RS09640 WP_120351143.1 1985021..1986091(-) (recA) [Sulfitobacter sp. D7]
ATGGCAACGGCAGATCTTTTGACAATGGACAGCAAGAAAACCGCAGAAAAGCAAAAGGCGCTCGACAGCGCGCTGGCCCA
GATCGAACGTCAGTTCGGCAAAGGGTCGATCATGAAGCTGGGCGCCGAAGGGGCGATCCAGGACATCAAAGCCAGCTCCA
CAGGCTCGCTGGGCCTTGATATCGCGCTTGGCATTGGCGGTCTGCCGATGGGGCGTATCATTGAAATTTATGGCCCGGAA
TCCTCGGGTAAGACAACTTTGACCCTGCACTGCGTCGCGGAGCAGCAGAAAGCTGGCGGCGTCTGCGCCTTTGTCGATGC
GGAACACGCGCTTGATCCGCAGTATGCGAAAAAGCTTGGCGTGGACATTGACGAGTTGCTTATTTCGCAGCCCGACACGG
GCGAACAAGCCTTGGAGATCACCGACACTCTTGTGCGATCTGGCGCGGTCAACATGGTTATCGTCGACTCAGTCGCGGCT
CTGACGCCGAAGTCCGAGCTTGAAGGTGAGATGGGCGACAGCAGCGTAGGGGTTCAGGCCCGTTTGATGTCTCAAGCCAT
GCGTAAGCTGACGGGCTCAATCAGCCGGTCGAACTGTATGGTCATTTTCATTAACCAAATTCGGATGAAAATCGGCGTTA
TGTTCGGGTCACCCGAGACTACAACGGGCGGTAACGCGCTGAAATTCTACTCCTCTGTCCGGCTCGACATTCGCCGCATC
GGCGCGCTGAAAGACCGTGATGAGGTTGTCGGCAACGCGACAAAGGTGAAGATCGTTAAAAACAAAGTCGCGCCGCCGTT
CAAGCAGGTCGAGTTCGACATCATGTATGGCGAAGGCATCTCCAAGATGGGCGAGTTGCTTGATCTTGGCGTCAAAGCTG
GCGTGGTCGATAAATCGGGCTCATGGTTCAGCTATGGGGATGAGCGGATCGGGCAGGGGCGCGAGAACGCGAAGAACTTC
CTGAAGCAAAACACCGCTATGGCGTCGGAGATTGAGGATAAGATCCGCGCAGCCCATGGATTGGACTTCGAAGGGTCCGG
CGGCGATGACGCGGATATTCTCGAAGCGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.037	92.135	0.654
recA	Glaesserella parasuis strain SC1401	70.405	90.169	0.635
recA	Pseudomonas stutzeri DSM 10701	69.47	90.169	0.626
recA	Neisseria gonorrhoeae MS11	67.477	92.416	0.624
recA	Neisseria gonorrhoeae strain FA1090	67.477	92.416	0.624
recA	Neisseria gonorrhoeae MS11	67.477	92.416	0.624
recA	Bacillus subtilis subsp. subtilis str. 168	66.767	92.978	0.621
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.062	89.888	0.621
recA	Vibrio cholerae strain A1552	69.062	89.888	0.621
recA	Acinetobacter baumannii D1279779	69.062	89.888	0.621
recA	Acinetobacter baylyi ADP1	68.438	89.888	0.615
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.776	94.101	0.61
recA	Helicobacter pylori strain NCTC11637	65.455	92.697	0.607
recA	Lactococcus lactis subsp. cremoris KW2	61.429	98.315	0.604
recA	Helicobacter pylori 26695	64.848	92.697	0.601
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.804	91.573	0.584
recA	Streptococcus pneumoniae R6	61.329	92.978	0.57
recA	Streptococcus mitis SK321	61.329	92.978	0.57
recA	Streptococcus mitis NCTC 12261	61.329	92.978	0.57
recA	Streptococcus pneumoniae TIGR4	61.329	92.978	0.57
recA	Streptococcus pneumoniae Rx1	61.329	92.978	0.57
recA	Streptococcus pneumoniae D39	61.329	92.978	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	61.656	91.573	0.565
recA	Streptococcus mutans UA159	59.697	92.697	0.553
recA	Streptococcus pyogenes NZ131	59.878	92.416	0.553
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.802	91.011	0.553