Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   B7L44_RS09285 Genome accession   NZ_CP020588
Coordinates   1878678..1879730 (+) Length   350 a.a.
NCBI ID   WP_002049645.1    Uniprot ID   A0A0A8JAC0
Organism   Acinetobacter nosocomialis strain SSA3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1873678..1884730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS09250 (B7L44_09250) kynU 1873938..1875188 (-) 1251 WP_016804934.1 kynureninase -
  B7L44_RS09255 (B7L44_09255) gigD 1875335..1875784 (+) 450 WP_016804936.1 Lrp/AsnC family transcriptional regulator GigD -
  B7L44_RS09260 (B7L44_09260) - 1875828..1876364 (+) 537 WP_017398339.1 GNAT family N-acetyltransferase -
  B7L44_RS09265 (B7L44_09265) - 1876417..1876710 (-) 294 WP_004708422.1 hypothetical protein -
  B7L44_RS09270 (B7L44_09270) - 1876825..1877061 (-) 237 WP_002049582.1 hypothetical protein -
  B7L44_RS09275 (B7L44_09275) - 1877422..1878108 (+) 687 WP_002049675.1 HAD-IA family hydrolase -
  B7L44_RS09280 (B7L44_09280) - 1878092..1878532 (+) 441 WP_002049587.1 RNA-binding S4 domain-containing protein -
  B7L44_RS09285 (B7L44_09285) recA 1878678..1879730 (+) 1053 WP_002049645.1 recombinase RecA Machinery gene
  B7L44_RS09290 (B7L44_09290) - 1879785..1880267 (+) 483 WP_004886889.1 regulatory protein RecX -
  B7L44_RS09300 (B7L44_09300) - 1880695..1881579 (+) 885 WP_017398340.1 YbgF trimerization domain-containing protein -
  B7L44_RS09305 (B7L44_09305) lpxA 1881634..1882422 (-) 789 WP_002049604.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  B7L44_RS09310 (B7L44_09310) fabZ 1882419..1882904 (-) 486 WP_002049600.1 3-hydroxyacyl-ACP dehydratase FabZ -
  B7L44_RS09315 (B7L44_09315) lpxD 1882911..1883981 (-) 1071 WP_004708409.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  B7L44_RS09320 (B7L44_09320) - 1883986..1884489 (-) 504 WP_016804937.1 OmpH family outer membrane protein -

Sequence

Protein


Download         Length: 350 a.a.        Molecular weight: 38070.43 Da        Isoelectric Point: 4.8604

>NTDB_id=224556 B7L44_RS09285 WP_002049645.1 1878678..1879730(+) (recA) [Acinetobacter nosocomialis strain SSA3]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENKHIAEEIER
NIREQLLTTGTNGAVQIEDDEEEPDLLLES

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=224556 B7L44_RS09285 WP_002049645.1 1878678..1879730(+) (recA) [Acinetobacter nosocomialis strain SSA3]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAACAATTTGGTAAAAATACGGTTATGCG
TCTCGGCGACAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCCTTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATTGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTACAAGCAATTGCT
CAATGTCAAAAGTCTGGTGGTACATGTGCCTTCATCGATGCAGAGCATGCCCTAGATCCTCAATATGCACGTAAGCTTGG
TGTAGATATTGACAACCTACTCGTTTCACAACCTGATAATGGTGAGCAAGCGCTTGAAATCGCTGATATGCTTGTTCGCT
CAGGTGCAATTGATTTAATCGTTGTGGACTCAGTAGCTGCTCTTACACCTAAAGCAGAGATTGAAGGCGAAATGGGTGAT
TCTCATATGGGTCTACAAGCACGTCTTATGAGCCAAGCACTTCGTAAAATTACTGGTAACGCTAAACGTTCAAACTGTAT
GGTTATCTTTATTAACCAAATCCGTATGAAGATTGGTGTTATGTTTGGTAGCCCAGAAACCACGACTGGTGGTAACGCTC
TTAAGTTCTATGCTTCAGTTCGTCTAGATATTCGTCGTATTGGTCAGGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAATAAAATGGCTCCTCCTTTTAGAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAATTAGGTGAACTTGTAGATTTGGCAGTACAGCAAGATATCGTTCAGAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAGAATAATGTGATCCGCTATTTTGAAGAAAATAAACATATTGCTGAAGAGATTGAACGC
AATATCCGTGAGCAATTGTTGACTACAGGTACAAATGGCGCAGTGCAAATTGAAGATGATGAAGAAGAACCAGATCTTTT
ATTAGAATCTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8JAC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

98.857

100

0.989
  recA Acinetobacter baylyi ADP1

92.507

99.143

0.917
  recA Pseudomonas stutzeri DSM 10701

73.487

99.143

0.729
  recA Vibrio cholerae strain A1552

73.394

93.429

0.686
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.394

93.429

0.686
  recA Glaesserella parasuis strain SC1401

71.914

92.571

0.666
  recA Ralstonia pseudosolanacearum GMI1000

70.732

93.714

0.663
  recA Neisseria gonorrhoeae MS11

65.812

100

0.66
  recA Neisseria gonorrhoeae MS11

65.812

100

0.66
  recA Neisseria gonorrhoeae strain FA1090

65.812

100

0.66
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.899

98.571

0.62
  recA Helicobacter pylori strain NCTC11637

63.158

97.714

0.617
  recA Helicobacter pylori 26695

62.865

97.714

0.614
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.444

94.571

0.6
  recA Streptococcus pneumoniae D39

59.827

98.857

0.591
  recA Streptococcus pneumoniae Rx1

59.827

98.857

0.591
  recA Streptococcus pneumoniae R6

59.827

98.857

0.591
  recA Streptococcus pneumoniae TIGR4

59.827

98.857

0.591
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.577

93.143

0.583
  recA Bacillus subtilis subsp. subtilis str. 168

63.043

92

0.58
  recA Streptococcus mitis NCTC 12261

61.656

93.143

0.574
  recA Streptococcus mutans UA159

61.28

93.714

0.574
  recA Streptococcus mitis SK321

61.35

93.143

0.571
  recA Streptococcus pyogenes NZ131

61.538

92.857

0.571
  recA Lactococcus lactis subsp. cremoris KW2

58.514

92.286

0.54
  recA Latilactobacillus sakei subsp. sakei 23K

58.255

91.714

0.534

Multiple sequence alignment