Detailed information NTG0224051

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B6V90_RS01535
• Genome accession: NZ_CP020554
• Coordinates: 341126..342226 (+)
• Length: 366 a.a.
• NCBI ID: WP_052349241.1
• Uniprot ID: -
• Organism: Parasaccharibacter apium strain G7_7_3c
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	331730..345300	341126..342226	within	0

Gene organization within MGE regions

Location: 331730..345300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6V90_RS01480	-	331730..332734 (+)	1005	WP_232317260.1	tyrosine recombinase XerC	-
B6V90_RS01485	-	332798..333748 (+)	951	WP_052349223.1	retroviral-like aspartic protease family protein	-
B6V90_RS01495	queE	334091..334732 (+)	642	WP_043561795.1	7-carboxy-7-deazaguanine synthase	-
B6V90_RS01500	queC	334732..335472 (+)	741	WP_081562516.1	7-cyano-7-deazaguanine synthase QueC	-
B6V90_RS01505	-	335469..336023 (+)	555	WP_081562517.1	6-carboxytetrahydropterin synthase	-
B6V90_RS01510	folE	336044..336685 (-)	642	WP_081562518.1	GTP cyclohydrolase I FolE	-
B6V90_RS01515	folK	336703..337572 (-)	870	WP_081562519.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
B6V90_RS01520	folP	337569..338429 (-)	861	WP_227431411.1	dihydropteroate synthase	-
B6V90_RS01525	-	338457..339212 (-)	756	WP_232317261.1	DsbA family protein	-
B6V90_RS01530	-	339563..340984 (+)	1422	WP_232317262.1	gamma-glutamyltransferase	-
B6V90_RS01535	recA	341126..342226 (+)	1101	WP_052349241.1	recombinase RecA	Machinery gene
B6V90_RS01540	-	342347..343366 (-)	1020	WP_081562520.1	hypothetical protein	-
B6V90_RS01545	-	343393..343998 (-)	606	WP_181005240.1	ATP-dependent Clp protease proteolytic subunit	-
B6V90_RS01550	-	344329..345300 (+)	972	WP_081562521.1	hypothetical protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 39497.86 Da
• Isoelectric Point: 5.7981

>NTDB_id=224051 B6V90_RS01535 WP_052349241.1 341126..342226(+) (recA) [Parasaccharibacter apium strain G7_7_3c]
MSADKNAERSKALDGALSQIERSFGKGSIMRLGQRPKEQVDVISTGSLGLDIGLGIGGLPRGRIIEIYGPESSGKTTLAL
HAVAEAQKKGGTAAFIDAEHALDPIYARKLGVDIDNLLLSQPDAGEQALEIADTLVRSGAIDILVVDSVAALVPKAELEG
EMGDSHVGLHARLMSQALRKLTGSVSRSNTTIIFLNQIRMKIGVMFGNPETTTGGNALKFYSSIRLDIRRIGSVKDKDEV
VGNQTRVKVVKNKMAPPFRQVEFDIMYGEGVSKMGELLDLGVKANVVEKSGAWFSYDSTRIGQGRENAKQYLREHPEMAA
EIEKRVRQDAGIIAEDMMVGESAEDDTDSSNELPLDSTSTGNRRKS

Nucleotide

• Length: 1101 bp

>NTDB_id=224051 B6V90_RS01535 WP_052349241.1 341126..342226(+) (recA) [Parasaccharibacter apium strain G7_7_3c]
ATGTCAGCAGACAAGAACGCAGAAAGAAGCAAAGCGCTGGATGGCGCTCTCAGCCAGATCGAACGCTCCTTCGGCAAGGG
GTCCATCATGCGGCTGGGCCAGCGGCCCAAGGAGCAGGTGGATGTCATTTCCACCGGGTCGCTGGGACTGGATATCGGGC
TGGGCATCGGTGGGCTGCCACGGGGCCGCATCATCGAGATTTATGGCCCGGAGAGCTCCGGCAAGACCACGCTGGCTCTC
CACGCCGTGGCTGAGGCGCAAAAAAAGGGCGGTACGGCTGCCTTCATTGATGCTGAACATGCGCTGGACCCCATTTATGC
CCGCAAGCTGGGGGTGGACATCGACAATCTGCTGCTCAGCCAGCCAGATGCCGGGGAACAGGCTCTGGAAATTGCTGATA
CGCTCGTCCGCTCCGGGGCCATCGACATTCTGGTCGTGGACTCTGTCGCTGCCCTCGTGCCCAAGGCCGAGCTGGAAGGG
GAAATGGGGGACAGCCATGTCGGCCTCCATGCCCGCCTGATGAGCCAGGCCCTGCGCAAGCTGACAGGCTCCGTTTCCCG
CTCCAACACCACCATCATCTTCCTGAACCAGATCCGCATGAAGATTGGCGTGATGTTCGGCAATCCGGAAACCACGACAG
GCGGCAACGCCCTGAAATTCTATTCCTCCATCCGCCTAGACATCCGCCGCATCGGCTCCGTGAAGGACAAGGACGAGGTC
GTGGGCAACCAGACACGGGTGAAGGTCGTCAAGAACAAGATGGCCCCCCCTTTCCGGCAGGTGGAATTCGACATCATGTA
TGGCGAGGGCGTCAGCAAAATGGGCGAGCTGCTGGACCTTGGCGTAAAGGCCAATGTGGTGGAGAAATCTGGCGCCTGGT
TCTCTTACGACAGCACCCGCATCGGCCAGGGCCGGGAAAATGCAAAGCAGTATCTGCGTGAGCATCCTGAAATGGCTGCG
GAAATTGAAAAACGGGTCCGGCAGGATGCTGGCATCATCGCTGAAGACATGATGGTTGGTGAGTCGGCAGAGGATGATAC
GGATTCATCCAATGAGCTGCCGCTGGACAGCACCAGCACCGGCAACCGCCGCAAAAGCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (11-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae strain FA1090	67.049	95.355	0.639
recA	Neisseria gonorrhoeae MS11	67.049	95.355	0.639
recA	Neisseria gonorrhoeae MS11	67.049	95.355	0.639
recA	Ralstonia pseudosolanacearum GMI1000	70.393	90.437	0.637
recA	Acinetobacter baylyi ADP1	67.246	94.262	0.634
recA	Pseudomonas stutzeri DSM 10701	64.74	94.536	0.612
recA	Acinetobacter baumannii D1279779	70	87.432	0.612
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.897	92.623	0.601
recA	Streptococcus pneumoniae D39	60.942	98.634	0.601
recA	Streptococcus pneumoniae Rx1	60.942	98.634	0.601
recA	Streptococcus pneumoniae R6	60.942	98.634	0.601
recA	Streptococcus pneumoniae TIGR4	60.942	98.634	0.601
recA	Streptococcus mitis SK321	62.04	96.448	0.598
recA	Latilactobacillus sakei subsp. sakei 23K	62.393	95.902	0.598
recA	Glaesserella parasuis strain SC1401	68.125	87.432	0.596
recA	Streptococcus mitis NCTC 12261	61.756	96.448	0.596
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.812	87.432	0.593
recA	Vibrio cholerae strain A1552	67.812	87.432	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	66.258	89.071	0.59
recA	Helicobacter pylori 26695	63.914	89.344	0.571
recA	Helicobacter pylori strain NCTC11637	63.609	89.344	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.918	89.891	0.566
recA	Streptococcus pyogenes NZ131	63.272	88.525	0.56
recA	Streptococcus mutans UA159	61.261	90.984	0.557
recA	Lactococcus lactis subsp. cremoris KW2	61.261	90.984	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.89	89.617	0.555