Detailed information NTG0022373

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SF2722
• Genome accession: NC_004337
• Coordinates: 2796381..2797442 (-)
• Length: 353 a.a.
• NCBI ID: NP_708507.2
• Uniprot ID: P0A7G9
• Organism: Shigella flexneri 2a str. 301
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2791381..2802442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SF2719	csrA	2792460..2792645 (-)	186	NP_708504.1	carbon storage regulator	-
SF2720	alaS	2792880..2795510 (-)	2631	NP_708505.2	alanyl-tRNA synthetase	-
SF2721	recX	2795638..2796138 (-)	501	NP_708506.1	recombination regulator RecX	-
SF2722	recA	2796381..2797442 (-)	1062	NP_708507.2	recombinase A	Machinery gene
SF2723	ygaD	2797522..2798019 (-)	498	NP_708508.2	hypothetical protein	-
SF2724	mltB	2798164..2799249 (-)	1086	NP_708509.2	murein hydrolase B	-
SF2726	srlE	2800064..2801023 (+)	960	NP_708510.1	PTS system glucitol/sorbitol-specific transporter subunit IIBC	-
SF2727	srlB	2801034..2801405 (+)	372	NP_708511.1	PTS system glucitol/sorbitol-specific transporter subunit IIA	-
SF2728	srlD	2801409..2802188 (+)	780	NP_708512.1	sorbitol-6-phosphate dehydrogenase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37973.37 Da
• Isoelectric Point: 4.8171

>NTDB_id=22373 SF2722 NP_708507.2 2796381..2797442(-) (recA) [Shigella flexneri 2a str. 301]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF

Nucleotide

• Length: 1062 bp

>NTDB_id=22373 SF2722 NP_708507.2 2796381..2797442(-) (recA) [Shigella flexneri 2a str. 301]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGCTGCAGGTG
ATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGATAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCACCGTTTAAACAGGCTGAATTTCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCAACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGAGTAGC
AGAAACTAACGAAGATTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: P0A7G9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.29	93.768	0.79
recA	Vibrio cholerae strain A1552	84.29	93.768	0.79
recA	Pseudomonas stutzeri DSM 10701	74.184	95.467	0.708
recA	Acinetobacter baumannii D1279779	74.085	92.918	0.688
recA	Acinetobacter baylyi ADP1	73.78	92.918	0.686
recA	Glaesserella parasuis strain SC1401	69.452	98.3	0.683
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae strain FA1090	69.018	92.351	0.637
recA	Ralstonia pseudosolanacearum GMI1000	70.159	89.235	0.626
recA	Streptococcus mitis SK321	60.286	99.15	0.598
recA	Streptococcus mitis NCTC 12261	60.286	99.15	0.598
recA	Helicobacter pylori strain NCTC11637	61.721	95.467	0.589
recA	Helicobacter pylori 26695	61.424	95.467	0.586
recA	Streptococcus pneumoniae TIGR4	63.467	91.501	0.581
recA	Streptococcus pneumoniae Rx1	63.467	91.501	0.581
recA	Streptococcus pneumoniae D39	63.467	91.501	0.581
recA	Streptococcus pneumoniae R6	63.467	91.501	0.581
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.654	91.785	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.661	94.334	0.572
recA	Streptococcus mutans UA159	62.154	92.068	0.572
recA	Streptococcus pyogenes NZ131	62.154	92.068	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	90.935	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	61.538	92.068	0.567
recA	Lactococcus lactis subsp. cremoris KW2	61.61	91.501	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	90.935	0.555