Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   B6K69_RS02370 Genome accession   NZ_CP020470
Coordinates   489065..490138 (-) Length   357 a.a.
NCBI ID   WP_107674380.1    Uniprot ID   A0A2T4J5H2
Organism   Fuscovulum blasticum strain 28/5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 484065..495138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B6K69_RS02350 (B6K69_02345) - 484763..484972 (+) 210 WP_108642631.1 YgaP family membrane protein -
  B6K69_RS02355 (B6K69_02350) - 484975..485769 (-) 795 WP_108642632.1 class II glutamine amidotransferase -
  B6K69_RS02360 (B6K69_02355) - 485957..486247 (-) 291 WP_107674382.1 DUF1330 domain-containing protein -
  B6K69_RS02365 (B6K69_02360) alaS 486252..488906 (-) 2655 WP_108642633.1 alanine--tRNA ligase -
  B6K69_RS02370 (B6K69_02365) recA 489065..490138 (-) 1074 WP_107674380.1 recombinase RecA Machinery gene
  B6K69_RS02375 (B6K69_02370) - 490345..490938 (+) 594 WP_108642634.1 hypothetical protein -
  B6K69_RS02380 (B6K69_02375) - 490967..493219 (-) 2253 WP_228156788.1 ATP-binding protein -
  B6K69_RS02385 (B6K69_02380) - 493385..494536 (-) 1152 WP_108642636.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 38166.75 Da        Isoelectric Point: 5.0618

>NTDB_id=223546 B6K69_RS02370 WP_107674380.1 489065..490138(-) (recA) [Fuscovulum blasticum strain 28/5]
MSAANLFDLGSKRDMDKQKALESALQQIERQFGKGSIMRLGTNSPAMDIEATSTGSLGLDIALGIGGLPKGRIVEIYGPE
SSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSLIVVDSVAA
LTPKAELEGDMGDATVGAQARLMSQAMRKLTASIGRTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
GAIKDREEVVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELVDIGVKAGVVEKSGAWYSFKDERIGQGRENAKTF
LRANPAMAAEIEDKIRAANGLDFTLVDGPEDGDAVEA

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=223546 B6K69_RS02370 WP_107674380.1 489065..490138(-) (recA) [Fuscovulum blasticum strain 28/5]
ATGTCGGCGGCCAATCTATTCGACCTTGGGAGCAAACGGGACATGGACAAGCAGAAGGCGCTGGAAAGCGCGCTGCAACA
GATCGAACGGCAGTTCGGCAAGGGCTCGATCATGCGCCTTGGCACCAACAGCCCGGCGATGGACATCGAAGCCACCTCGA
CCGGCAGCCTGGGCCTGGACATTGCCCTGGGGATCGGCGGCCTGCCGAAAGGCCGGATCGTGGAAATCTACGGCCCGGAA
AGCAGCGGCAAGACCACGCTGACCCTGCATGTGGTGGCCGAGGAACAGAAGAAGGGCGGCGTCTGCGCCTTTGTCGATGC
CGAACACGCGCTGGACCCGCAATATGCCAAGAAGCTGGGCGTCAACCTGGACGAACTGCTGATCAGCCAGCCCGACACCG
GCGAACAGGCGCTGGAGATCGTGGATACGCTGGTGCGCAGCGGCGCGGTCAGCCTGATCGTGGTCGACTCGGTCGCCGCG
CTGACGCCCAAGGCGGAACTGGAAGGCGACATGGGCGACGCCACGGTGGGCGCCCAGGCCCGGCTGATGAGCCAGGCGAT
GCGCAAGCTGACCGCCAGCATCGGCCGCACCAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATTGGCGTGA
TGTTCGGCAGCCCCGAAACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCCAGCGTGCGGCTGGACATCCGTCGCATC
GGCGCCATCAAGGACCGTGAAGAGGTGGTCGGCAACACCACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCCCCGCCGTT
CAAGCAGGTGGAATTCGACATCATGTATGGCGAAGGCATCTCGAAGATGGGCGAGCTGGTCGACATCGGCGTCAAGGCCG
GGGTCGTGGAAAAGTCGGGCGCCTGGTATTCCTTCAAGGATGAGCGCATCGGTCAGGGCCGCGAGAATGCCAAGACCTTC
CTGCGGGCCAACCCCGCCATGGCGGCCGAGATCGAGGACAAGATCCGCGCCGCGAACGGGCTGGATTTCACCCTTGTCGA
CGGCCCCGAGGACGGGGATGCCGTCGAGGCGTGA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(19-281)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4J5H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Pseudomonas stutzeri DSM 10701

71.605

90.756

0.65
  recA Neisseria gonorrhoeae MS11

68.75

94.118

0.647
  recA Neisseria gonorrhoeae MS11

68.75

94.118

0.647
  recA Neisseria gonorrhoeae strain FA1090

68.75

94.118

0.647
  recA Vibrio cholerae strain A1552

71.517

90.476

0.647
  recA Vibrio cholerae O1 biovar El Tor strain E7946

71.517

90.476

0.647
  recA Ralstonia pseudosolanacearum GMI1000

73.248

87.955

0.644
  recA Glaesserella parasuis strain SC1401

70.938

89.636

0.636
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

65.116

96.359

0.627
  recA Acinetobacter baumannii D1279779

69.04

90.476

0.625
  recA Acinetobacter baylyi ADP1

69.04

90.476

0.625
  recA Helicobacter pylori strain NCTC11637

64.602

94.958

0.613
  recA Helicobacter pylori 26695

64.012

94.958

0.608
  recA Streptococcus mitis SK321

61.032

97.759

0.597
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

65.031

91.317

0.594
  recA Streptococcus pneumoniae D39

60.745

97.759

0.594
  recA Streptococcus pneumoniae TIGR4

60.745

97.759

0.594
  recA Streptococcus mitis NCTC 12261

60.745

97.759

0.594
  recA Streptococcus pneumoniae Rx1

60.745

97.759

0.594
  recA Streptococcus pneumoniae R6

60.745

97.759

0.594
  recA Bacillus subtilis subsp. subtilis str. 168

64.526

91.597

0.591
  recA Latilactobacillus sakei subsp. sakei 23K

61.012

94.118

0.574
  recA Lactococcus lactis subsp. cremoris KW2

60.117

95.518

0.574
  recA Streptococcus mutans UA159

61.212

92.437

0.566
  recA Streptococcus pyogenes NZ131

60.79

92.157

0.56
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.802

90.756

0.552

Multiple sequence alignment