Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | OB_RS08400 | Genome accession | NC_004193 |
| Coordinates | 1663302..1664345 (+) | Length | 347 a.a. |
| NCBI ID | WP_011066024.1 | Uniprot ID | Q8CXG7 |
| Organism | Oceanobacillus iheyensis HTE831 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1639944..1717355 | 1663302..1664345 | within | 0 |
Gene organization within MGE regions
Location: 1639944..1717355
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OB_RS08295 (OB1603) | rpsO | 1640974..1641243 (+) | 270 | WP_011066003.1 | 30S ribosomal protein S15 | - |
| OB_RS08300 (OB1604) | pnp | 1641436..1643553 (+) | 2118 | WP_011066004.1 | polyribonucleotide nucleotidyltransferase | - |
| OB_RS08305 (OB1605) | - | 1643701..1644651 (+) | 951 | WP_011066005.1 | polysaccharide deacetylase family protein | - |
| OB_RS08310 (OB1606) | - | 1644674..1645894 (+) | 1221 | WP_011066006.1 | M16 family metallopeptidase | - |
| OB_RS08315 (OB1607) | - | 1646063..1646311 (+) | 249 | WP_011066007.1 | YlmC/YmxH family sporulation protein | - |
| OB_RS08320 (OB1608) | dpaA | 1646455..1647339 (+) | 885 | WP_011066008.1 | dipicolinic acid synthetase subunit A | - |
| OB_RS08325 (OB1609) | dpaB | 1647336..1647926 (+) | 591 | WP_011066009.1 | dipicolinate synthase subunit B | - |
| OB_RS08330 (OB1610) | asd | 1647985..1649037 (+) | 1053 | WP_011066010.1 | aspartate-semialdehyde dehydrogenase | - |
| OB_RS08335 (OB1611) | dapG | 1649100..1650335 (+) | 1236 | WP_011066011.1 | aspartate kinase | - |
| OB_RS18400 | - | 1650630..1650809 (+) | 180 | WP_160162352.1 | hypothetical protein | - |
| OB_RS08340 (OB1612) | - | 1650937..1651671 (+) | 735 | WP_011066012.1 | ClpP family protease | - |
| OB_RS08345 (OB1613) | - | 1651668..1651874 (+) | 207 | WP_041544134.1 | YlzJ-like family protein | - |
| OB_RS08350 (OB1614) | - | 1651983..1654331 (+) | 2349 | WP_011066014.1 | FtsK/SpoIIIE family DNA translocase | - |
| OB_RS08355 (OB1615) | - | 1654611..1655336 (+) | 726 | WP_011066015.1 | GntR family transcriptional regulator | - |
| OB_RS08360 (OB1616) | yfmF | 1655587..1656876 (+) | 1290 | WP_011066016.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| OB_RS08365 (OB1617) | yfmH | 1656869..1658152 (+) | 1284 | WP_011066017.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| OB_RS08370 (OB1618) | ymfI | 1658162..1658878 (+) | 717 | WP_011066018.1 | elongation factor P 5-aminopentanone reductase | - |
| OB_RS08375 (OB1619) | - | 1658959..1659207 (+) | 249 | WP_011066019.1 | DUF3243 domain-containing protein | - |
| OB_RS08380 (OB1620) | - | 1659505..1660290 (+) | 786 | WP_011066020.1 | DUF3388 domain-containing protein | - |
| OB_RS08385 (OB1621) | - | 1660319..1661236 (+) | 918 | WP_011066021.1 | helix-turn-helix domain-containing protein | - |
| OB_RS08390 (OB1622) | pgsA | 1661302..1661880 (+) | 579 | WP_011066022.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OB_RS08395 (OB1623) | - | 1661880..1663133 (+) | 1254 | WP_011066023.1 | competence/damage-inducible protein A | - |
| OB_RS08400 (OB1624) | recA | 1663302..1664345 (+) | 1044 | WP_011066024.1 | recombinase RecA | Machinery gene |
| OB_RS08405 (OB1625) | rny | 1664607..1666169 (+) | 1563 | WP_011066025.1 | ribonuclease Y | - |
| OB_RS08410 (OB1626) | - | 1666416..1667213 (+) | 798 | WP_011066026.1 | TIGR00282 family metallophosphoesterase | - |
| OB_RS08415 (OB1627) | - | 1667305..1667565 (+) | 261 | WP_011066027.1 | stage V sporulation protein S | - |
| OB_RS08420 (OB1628) | miaB | 1667702..1669261 (+) | 1560 | WP_011066028.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| OB_RS08425 (OB1629) | - | 1669263..1669691 (+) | 429 | WP_011066029.1 | RicAFT regulatory complex protein RicA family protein | - |
| OB_RS08430 (OB1630) | - | 1670118..1670690 (+) | 573 | WP_011066030.1 | outer spore coat protein CotE | - |
| OB_RS08435 (OB1631) | mutS | 1670808..1673411 (+) | 2604 | WP_011066031.1 | DNA mismatch repair protein MutS | - |
| OB_RS08440 (OB1632) | mutL | 1673425..1675317 (+) | 1893 | WP_011066032.1 | DNA mismatch repair endonuclease MutL | - |
| OB_RS08445 (OB1633) | - | 1675394..1675837 (+) | 444 | WP_011066033.1 | Dps family protein | - |
| OB_RS08450 (OB1634) | miaA | 1675860..1676801 (+) | 942 | WP_011066034.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| OB_RS08455 (OB1635) | hfq | 1676835..1677059 (+) | 225 | WP_011066035.1 | RNA chaperone Hfq | - |
| OB_RS08470 (OB1638) | - | 1678463..1678921 (-) | 459 | WP_011066038.1 | hypothetical protein | - |
| OB_RS08475 (OB1639) | - | 1678953..1680656 (-) | 1704 | WP_011066039.1 | sodium:solute symporter family protein | - |
| OB_RS08480 (OB1640) | - | 1680671..1680973 (-) | 303 | WP_011066040.1 | DUF4212 domain-containing protein | - |
| OB_RS08485 (OB1641) | - | 1681173..1681913 (-) | 741 | WP_011066041.1 | LytR/AlgR family response regulator transcription factor | - |
| OB_RS08490 (OB1642) | - | 1681944..1683701 (-) | 1758 | WP_011066042.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| OB_RS08495 (OB1643) | - | 1683698..1685200 (-) | 1503 | WP_011066043.1 | solute symporter family protein | - |
| OB_RS18405 | - | 1685651..1685845 (+) | 195 | WP_011066045.1 | hypothetical protein | - |
| OB_RS08510 | - | 1685980..1686177 (+) | 198 | WP_041544135.1 | hypothetical protein | - |
| OB_RS08515 (OB1645) | - | 1686191..1686610 (+) | 420 | WP_011066046.1 | hypothetical protein | - |
| OB_RS08520 (OB1646) | - | 1687123..1688337 (+) | 1215 | WP_081427511.1 | ISL3 family transposase | - |
| OB_RS08525 (OB1647) | spoVK | 1688714..1689583 (+) | 870 | WP_050750242.1 | stage V sporulation protein K | - |
| OB_RS08530 (OB1648) | hflX | 1689628..1690869 (+) | 1242 | WP_011066049.1 | GTPase HflX | - |
| OB_RS08535 (OB1649) | - | 1690875..1692113 (+) | 1239 | WP_041544136.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| OB_RS08540 (OB1650) | - | 1692252..1692626 (+) | 375 | WP_041544526.1 | MerR family transcriptional regulator | - |
| OB_RS08545 (OB1651) | glnA | 1692716..1694053 (+) | 1338 | WP_011066052.1 | type I glutamate--ammonia ligase | - |
| OB_RS08550 (OB1652) | - | 1694572..1695294 (+) | 723 | WP_011066053.1 | phosphoadenylyl-sulfate reductase | - |
| OB_RS08555 (OB1653) | - | 1695414..1697255 (+) | 1842 | WP_011066054.1 | assimilatory sulfite reductase (NADPH) flavoprotein subunit | - |
| OB_RS08560 (OB1654) | cysI | 1697285..1699015 (+) | 1731 | WP_011066055.1 | assimilatory sulfite reductase (NADPH) hemoprotein subunit | - |
| OB_RS08565 (OB1655) | cobA | 1699043..1699816 (+) | 774 | WP_011066056.1 | uroporphyrinogen-III C-methyltransferase | - |
| OB_RS08570 (OB1656) | - | 1699832..1700578 (+) | 747 | WP_011066057.1 | sirohydrochlorin chelatase | - |
| OB_RS08575 (OB1657) | - | 1700594..1701223 (+) | 630 | WP_011066058.1 | NAD(P)-binding protein | - |
| OB_RS08580 (OB1658) | - | 1701223..1702026 (+) | 804 | WP_231847028.1 | uroporphyrinogen-III synthase | - |
| OB_RS08585 (OB1659) | sat | 1702049..1703236 (+) | 1188 | WP_011066060.1 | sulfate adenylyltransferase | - |
| OB_RS08590 (OB1660) | - | 1703261..1705027 (+) | 1767 | WP_011066061.1 | SLC13 family permease | - |
| OB_RS08595 (OB1661) | cysC | 1705039..1705638 (+) | 600 | WP_011066062.1 | adenylyl-sulfate kinase | - |
| OB_RS08600 (OB1662) | - | 1706304..1706981 (+) | 678 | WP_011066063.1 | potassium channel family protein | - |
| OB_RS08605 | - | 1706982..1708314 (+) | 1333 | Protein_1681 | TrkH family potassium uptake protein | - |
| OB_RS18790 | - | 1708403..1709242 (+) | 840 | WP_011066066.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| OB_RS08615 | - | 1709348..1710178 (-) | 831 | Protein_1683 | manganese catalase family protein | - |
| OB_RS08620 (OB1668) | - | 1710321..1710581 (-) | 261 | WP_011066069.1 | hypothetical protein | - |
| OB_RS08625 (OB1669) | lexA | 1710717..1711340 (-) | 624 | WP_011066070.1 | transcriptional repressor LexA | - |
| OB_RS08630 (OB1670) | - | 1711630..1712268 (+) | 639 | WP_011066071.1 | YneB family resolvase-like protein | - |
| OB_RS08635 (OB1671) | - | 1712352..1712585 (+) | 234 | WP_011066072.1 | DUF896 domain-containing protein | - |
| OB_RS08640 (OB1672) | tkt | 1712669..1714669 (+) | 2001 | WP_011066073.1 | transketolase | - |
| OB_RS08645 (OB1673) | sirA | 1714826..1715284 (+) | 459 | WP_011066074.1 | sporulation inhibitor of replication protein SirA | - |
| OB_RS08650 (OB1674) | - | 1715438..1715905 (+) | 468 | WP_011066075.1 | DinB family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37724.95 Da Isoelectric Point: 5.3503
>NTDB_id=22332 OB_RS08400 WP_011066024.1 1663302..1664345(+) (recA) [Oceanobacillus iheyensis HTE831]
MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAE
AQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGRENAKQYLKEHEEVLTEIHQS
IRQHYELDKVDEDKTEEEASQESLDLK
MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEIYGPESSGKTTVALHAIAE
AQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKLGNDAVGNKA
RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGRENAKQYLKEHEEVLTEIHQS
IRQHYELDKVDEDKTEEEASQESLDLK
Nucleotide
Download Length: 1044 bp
>NTDB_id=22332 OB_RS08400 WP_011066024.1 1663302..1664345(+) (recA) [Oceanobacillus iheyensis HTE831]
TTGAGTGATAGAAAACAAGCATTAGATATGGCTTTAAGACAAATAGAGAAGCAATTTGGTAAAGGTTCCATTATGAAAAT
GGGGGAGAATGAAATCCCGAAAATCGCTACTATCCCAAGTGGATCATTAGCATTAGATGTTGCCTTAGGTATAGGCGGGT
ATCCTCGTGGTCGTGTAGTTGAAATATATGGTCCAGAGTCCTCAGGTAAAACAACCGTAGCACTTCACGCAATTGCGGAA
GCACAAAAGCAAGGAGGACAAGCTGCGTTTATCGATGCAGAGCATGCGCTTGACCCAGTATATGCGAAAGCTTTAGGTGT
AAATATTGATGAATTACTGTTATCTCAACCAGATACAGGTGAACAAGCATTAGAAATTGCAGAGGCCCTTGTTCGAAGCG
GTGCTGTAGATATTATCGTAGTTGACTCTGTAGCTGCGCTTGTGCCAAAAGCTGAAATTGAAGGTGAAATGGGAGATTCT
CATGTTGGGCTACAAGCACGTTTAATGTCACAAGCATTACGTAAATTATCTGGTGCAATAAATAAGTCGAAAACAACGGC
AATATTTATTAACCAAATCCGTGAAAAAGTCGGAGTTATGTTCGGAAATCCAGAGACAACTCCTGGTGGACGAGCATTAA
AATTCTATTCCTCTGTACGTTTAGAAGTAAGAAGAGCGGAAACATTAAAGCTAGGTAATGATGCAGTCGGAAATAAAGCG
CGAATTAAAGTTGTAAAAAATAAAGTTGCTCCACCGTTTAAACAAGCTGAAGTAGATATTATGTATGGAAAAGGTATTTC
TAAAGAAGGTGAAGTATTAGATATTGGTTCCGATCTAGATATTGTTATGAAAAGTGGTGCATGGTATTCCTATAACAATG
ATCGTCTAGGACAGGGCAGAGAAAATGCGAAACAATATCTAAAAGAACATGAAGAAGTATTAACAGAAATCCATCAGTCT
ATTCGTCAGCATTATGAATTAGACAAGGTGGATGAAGATAAGACGGAAGAAGAAGCTTCTCAAGAGAGTCTTGATTTAAA
ATAG
TTGAGTGATAGAAAACAAGCATTAGATATGGCTTTAAGACAAATAGAGAAGCAATTTGGTAAAGGTTCCATTATGAAAAT
GGGGGAGAATGAAATCCCGAAAATCGCTACTATCCCAAGTGGATCATTAGCATTAGATGTTGCCTTAGGTATAGGCGGGT
ATCCTCGTGGTCGTGTAGTTGAAATATATGGTCCAGAGTCCTCAGGTAAAACAACCGTAGCACTTCACGCAATTGCGGAA
GCACAAAAGCAAGGAGGACAAGCTGCGTTTATCGATGCAGAGCATGCGCTTGACCCAGTATATGCGAAAGCTTTAGGTGT
AAATATTGATGAATTACTGTTATCTCAACCAGATACAGGTGAACAAGCATTAGAAATTGCAGAGGCCCTTGTTCGAAGCG
GTGCTGTAGATATTATCGTAGTTGACTCTGTAGCTGCGCTTGTGCCAAAAGCTGAAATTGAAGGTGAAATGGGAGATTCT
CATGTTGGGCTACAAGCACGTTTAATGTCACAAGCATTACGTAAATTATCTGGTGCAATAAATAAGTCGAAAACAACGGC
AATATTTATTAACCAAATCCGTGAAAAAGTCGGAGTTATGTTCGGAAATCCAGAGACAACTCCTGGTGGACGAGCATTAA
AATTCTATTCCTCTGTACGTTTAGAAGTAAGAAGAGCGGAAACATTAAAGCTAGGTAATGATGCAGTCGGAAATAAAGCG
CGAATTAAAGTTGTAAAAAATAAAGTTGCTCCACCGTTTAAACAAGCTGAAGTAGATATTATGTATGGAAAAGGTATTTC
TAAAGAAGGTGAAGTATTAGATATTGGTTCCGATCTAGATATTGTTATGAAAAGTGGTGCATGGTATTCCTATAACAATG
ATCGTCTAGGACAGGGCAGAGAAAATGCGAAACAATATCTAAAAGAACATGAAGAAGTATTAACAGAAATCCATCAGTCT
ATTCGTCAGCATTATGAATTAGACAAGGTGGATGAAGATAAGACGGAAGAAGAAGCTTCTCAAGAGAGTCTTGATTTAAA
ATAG
Similar proteins
Only experimentally validated proteins are listed.