Detailed information NTG0223168

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A6J85_RS04325
• Genome accession: NZ_CP020450
• Coordinates: 860349..861500 (+)
• Length: 383 a.a.
• NCBI ID: WP_012131014.1
• Uniprot ID: A0AAQ4J8Q5
• Organism: Streptococcus gordonii strain FDAARGOS_257
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 855349..866500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J85_RS04290 (A6J85_04250)	-	855808..856314 (-)	507	WP_045634808.1	helix-turn-helix domain-containing protein	-
A6J85_RS04295 (A6J85_04255)	ruvA	856482..857075 (+)	594	WP_045634768.1	Holliday junction branch migration protein RuvA	-
A6J85_RS04300 (A6J85_04260)	-	857085..857639 (+)	555	WP_045634769.1	DNA-3-methyladenine glycosylase I	-
A6J85_RS04305 (A6J85_04265)	-	857644..858303 (+)	660	WP_045634770.1	CPBP family intramembrane glutamic endopeptidase	-
A6J85_RS04310 (A6J85_04270)	-	858354..858764 (-)	411	WP_082307330.1	helix-turn-helix domain-containing protein	-
A6J85_RS04320 (A6J85_04275)	cinA	859034..860290 (+)	1257	WP_045634772.1	competence/damage-inducible protein A	Machinery gene
A6J85_RS04325 (A6J85_04280)	recA	860349..861500 (+)	1152	WP_012131014.1	recombinase RecA	Machinery gene
A6J85_RS04330 (A6J85_04285)	spx	861587..861985 (+)	399	WP_008809970.1	transcriptional regulator Spx	-
A6J85_RS04335 (A6J85_04290)	-	862133..862705 (+)	573	WP_045634773.1	SP0191 family lipoprotein	-
A6J85_RS04340 (A6J85_04295)	-	862817..863083 (+)	267	WP_008809968.1	IreB family regulatory phosphoprotein	-
A6J85_RS04345 (A6J85_04300)	ruvX	863083..863502 (+)	420	WP_012131012.1	Holliday junction resolvase RuvX	-
A6J85_RS04350 (A6J85_04305)	-	863524..863835 (+)	312	WP_008809966.1	DUF1292 domain-containing protein	-
A6J85_RS04355 (A6J85_04310)	-	864087..865325 (+)	1239	WP_061598967.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
A6J85_RS04360 (A6J85_04315)	-	865433..865912 (+)	480	WP_045773036.1	SP_0198 family lipoprotein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41290.86 Da
• Isoelectric Point: 4.7868

>NTDB_id=223168 A6J85_RS04325 WP_012131014.1 860349..861500(+) (recA) [Streptococcus gordonii strain FDAARGOS_257]
MAKKQKNLDDITKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDAKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLNIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFDEIDRQVRVRFGLIEDDQEGEATAAETTGKITENIEEVTLELDDAIEIEE

Nucleotide

• Length: 1152 bp

>NTDB_id=223168 A6J85_RS04325 WP_012131014.1 860349..861500(+) (recA) [Streptococcus gordonii strain FDAARGOS_257]
ATGGCAAAGAAACAAAAGAATCTAGATGATATTACAAAAAAATTCGGAGACGAACGCCAAAAGGCTTTGGACAACGCCCT
GAAGAACATTGAAAAGGACTTCGGTAAGGGAGCGATTATGCGCCTGGGCGAGCGAGCAGAACAAAAGGTTCAAGTCATGA
GCTCAGGATCTTTGGCCTTGGATATCGCCCTTGGTGCCGGTGGTTATCCTAAGGGACGTATCATTGAAATCTACGGTCCA
GAGTCTTCTGGTAAGACGACTGTTGCCCTTCATGCTGTTGCTCAAGCGCAAAAAGAGGGTGGTATTGCAGCCTTTATTGA
TGCAGAGCATGCTTTGGATCCATCTTACGCGGCTGCTCTAGGTGTAAATATTGATGAGCTGTTGCTATCTCAACCAGATT
CTGGTGAGCAAGGTTTGGAAATTGCAGGGAAATTGATTGACTCTGGTGCAGTTGATTTAGTTGTCATTGACTCGGTTGCA
GCTCTTGTACCACGTGCGGAAATCGATGGAGATATCGGTGATAGCCACGTTGGTTTGCAAGCTCGGATGATGAGTCAGGC
CATGCGTAAACTGTCTGCTTCTATCAACAAAACAAAAACAATTGCCATCTTTATCAACCAACTTCGCGAAAAAGTTGGGG
TTATGTTCGGAAATCCTGAAACAACACCAGGTGGCCGTGCCTTGAAATTCTATGCTTCTGTCCGTTTGGATGTTCGTGGA
AATACTCAAATTAAAGGAACTGGTGACGCTAAGGATACAAACGTTGGTAAGGAAACCAAGATTAAGGTCGTGAAAAACAA
GGTAGCTCCGCCATTTAAAGAAGCCTTCGTGGAAATCATGTACGGAGAAGGAATTTCTAAAACTGGTGAACTTATCAAGA
TTGCAACAGACTTGAATATCATCAAAAAAGCAGGTGCTTGGTATTCTTATAATGATGAGAAGATTGGTCAAGGTTCTGAA
AATGCCAAGAAATATTTGGCTGATCACCCAGAAGTCTTTGACGAAATCGACCGTCAAGTCCGTGTCCGTTTTGGCTTGAT
TGAAGATGATCAAGAAGGGGAAGCAACTGCGGCTGAAACAACAGGGAAAATCACTGAAAACATTGAAGAAGTAACACTTG
AACTAGACGATGCTATAGAGATCGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mitis SK321	87.958	99.739	0.877
recA	Streptococcus mitis NCTC 12261	87.958	99.739	0.877
recA	Streptococcus pneumoniae D39	86.269	100	0.869
recA	Streptococcus pneumoniae R6	86.269	100	0.869
recA	Streptococcus pneumoniae Rx1	86.269	100	0.869
recA	Streptococcus pneumoniae TIGR4	86.269	100	0.869
recA	Streptococcus pyogenes NZ131	85.64	100	0.856
recA	Streptococcus mutans UA159	84.974	100	0.856
recA	Lactococcus lactis subsp. cremoris KW2	78.857	91.384	0.721
recA	Latilactobacillus sakei subsp. sakei 23K	70.303	86.162	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	68.997	85.901	0.593
recA	Neisseria gonorrhoeae strain FA1090	59.544	91.645	0.546
recA	Neisseria gonorrhoeae MS11	59.544	91.645	0.546
recA	Neisseria gonorrhoeae MS11	59.544	91.645	0.546
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.467	84.334	0.535
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.846	84.856	0.525
recA	Vibrio cholerae strain A1552	61.846	84.856	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.542	86.684	0.525
recA	Glaesserella parasuis strain SC1401	58.702	88.512	0.52
recA	Acinetobacter baylyi ADP1	60.923	84.856	0.517
recA	Acinetobacter baumannii D1279779	60.923	84.856	0.517
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.704	86.423	0.499
recA	Helicobacter pylori 26695	57.576	86.162	0.496
recA	Helicobacter pylori strain NCTC11637	57.576	86.162	0.496
recA	Pseudomonas stutzeri DSM 10701	57.927	85.64	0.496
recA	Ralstonia pseudosolanacearum GMI1000	59.937	82.768	0.496