Detailed information NTG0217523

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: XJ32_RS09155
• Genome accession: NZ_CP019645
• Coordinates: 2018923..2019963 (+)
• Length: 346 a.a.
• NCBI ID: WP_005219265.1
• Uniprot ID: A0A099VBI1
• Organism: Helicobacter bilis strain AAQJH
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2013923..2024963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XJ32_RS09150 (XJ32_09120)	-	2017018..2017521 (-)	504	WP_005218925.1	hypothetical protein	-
XJ32_RS09155 (XJ32_09125)	recA	2018923..2019963 (+)	1041	WP_005219265.1	recombinase RecA	Machinery gene
XJ32_RS09160 (XJ32_09130)	-	2020140..2020343 (+)	204	WP_077389238.1	hypothetical protein	-
XJ32_RS09165 (XJ32_09135)	-	2020600..2020890 (+)	291	WP_155761506.1	N-6 DNA methylase	-
XJ32_RS09170 (XJ32_09140)	-	2022593..2022775 (+)	183	WP_077389240.1	hypothetical protein	-
XJ32_RS12030	-	2023298..2023474 (+)	177	WP_155761507.1	hypothetical protein	-
XJ32_RS12985 (XJ32_09145)	-	2023802..2024410 (+)	609	WP_254422345.1	hypothetical protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37107.59 Da
• Isoelectric Point: 5.0426

>NTDB_id=217523 XJ32_RS09155 WP_005219265.1 2018923..2019963(+) (recA) [Helicobacter bilis strain AAQJH]
MAIDPNKQKALENAMKQVDKAFGKGVLIRLGDKQVEKIDSISTGSLGLDLALGIGGIPKGRIIEIYGPESSGKTTLSLQV
IAECQRNGGVCAFIDAEHALDVYYAKNLGVDTENLLVSQPDNGEQALSILETIACSGGVDLIVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLSRMNTTVIFINQIRMKIGVMGYGSPETTTGGNALKFYASVRVDIRKVATLKQSDSII
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIIDKSGAWLSYGDKKIGQGRENAKAFLKENVDIANE
IAAKIKEQIGTSDEIMPLPDELEGSE

Nucleotide

• Length: 1041 bp

>NTDB_id=217523 XJ32_RS09155 WP_005219265.1 2018923..2019963(+) (recA) [Helicobacter bilis strain AAQJH]
ATGGCGATTGATCCAAATAAACAAAAAGCACTTGAAAATGCGATGAAGCAAGTGGATAAGGCATTTGGCAAAGGTGTGCT
TATACGACTTGGAGACAAGCAGGTAGAAAAGATAGATTCTATATCGACAGGCTCGTTAGGGCTTGATTTAGCACTAGGAA
TTGGTGGTATCCCAAAGGGTAGAATCATTGAGATTTATGGACCAGAGTCAAGCGGTAAAACGACATTATCTCTGCAAGTT
ATCGCAGAGTGTCAAAGAAATGGCGGTGTATGTGCGTTTATTGACGCTGAACATGCCCTTGATGTGTATTATGCAAAAAA
TCTTGGCGTTGATACAGAGAATCTTTTAGTCAGTCAGCCAGATAATGGTGAGCAAGCCTTAAGCATTTTAGAGACGATTG
CGTGTAGTGGCGGGGTTGATTTGATTGTTGTGGATTCTGTTGCAGCTTTGACGCCGAAAGCAGAGATTGATGGCGATATG
GGCGATCAGCATGTGGGCTTACAAGCAAGGCTTATGAGCCATGCTTTGCGTAAGATTACAGGTGTGTTATCAAGGATGAA
TACCACCGTGATTTTTATCAATCAGATTCGCATGAAAATCGGCGTTATGGGCTATGGTAGCCCAGAGACTACAACAGGTG
GTAATGCGTTGAAATTCTATGCGAGTGTGCGTGTGGATATAAGAAAAGTGGCTACACTCAAGCAAAGCGATAGTATTATC
GGCAATCGTGCGAAGGCAAAAGTGGTGAAAAATAAGGTTGCTCCACCATTTAGAGAAGCGGAATTTGACATTATGTTTGG
CGAGGGTATCAGCAAAGAGGGCGAGATTATTGACTATGGGGTAAAGCTTGATATTATCGATAAAAGCGGTGCGTGGCTAT
CTTATGGCGATAAAAAAATCGGACAGGGCAGAGAAAATGCAAAAGCCTTTTTAAAAGAAAATGTTGATATAGCAAATGAA
ATTGCTGCGAAAATAAAGGAGCAAATTGGCACAAGTGATGAGATTATGCCCCTGCCAGATGAATTAGAGGGGAGTGAGTA
G

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

3D structure

• AlphaFold DB: A0A099VBI1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori 26695	85.63	98.555	0.844
recA	Helicobacter pylori strain NCTC11637	85.337	98.555	0.841
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	76.453	99.422	0.76
recA	Acinetobacter baylyi ADP1	63.037	100	0.636
recA	Acinetobacter baumannii D1279779	64.848	95.376	0.618
recA	Neisseria gonorrhoeae MS11	65.839	93.064	0.613
recA	Neisseria gonorrhoeae MS11	65.839	93.064	0.613
recA	Neisseria gonorrhoeae strain FA1090	65.839	93.064	0.613
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.363	96.243	0.61
recA	Pseudomonas stutzeri DSM 10701	63.609	94.509	0.601
recA	Bacillus subtilis subsp. subtilis str. 168	63.692	93.931	0.598
recA	Glaesserella parasuis strain SC1401	62.236	95.665	0.595
recA	Ralstonia pseudosolanacearum GMI1000	65.079	91.04	0.592
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.08	94.509	0.587
recA	Vibrio cholerae strain A1552	62.08	94.509	0.587
recA	Streptococcus mitis NCTC 12261	58.308	95.665	0.558
recA	Streptococcus mitis SK321	58.006	95.665	0.555
recA	Latilactobacillus sakei subsp. sakei 23K	56.012	98.555	0.552
recA	Streptococcus pneumoniae Rx1	57.704	95.665	0.552
recA	Streptococcus pneumoniae D39	57.704	95.665	0.552
recA	Streptococcus pneumoniae R6	57.704	95.665	0.552
recA	Streptococcus pneumoniae TIGR4	57.704	95.665	0.552
recA	Lactococcus lactis subsp. cremoris KW2	57.53	95.954	0.552
recA	Streptococcus mutans UA159	56.928	95.954	0.546
recA	Streptococcus pyogenes NZ131	57.622	94.798	0.546
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.099	93.642	0.535