Detailed information NTG0216106

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BXU08_RS05700
• Genome accession: NZ_CP019511
• Coordinates: 1221253..1222323 (-)
• Length: 356 a.a.
• NCBI ID: WP_077509206.1
• Uniprot ID: A0A1S6FIB4
• Organism: Sphingomonas sp. LM7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1216253..1227323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BXU08_RS05680 (BXU08_05700)	-	1216950..1218572 (+)	1623	WP_077509202.1	hypothetical protein	-
BXU08_RS05685 (BXU08_05705)	-	1218639..1219976 (+)	1338	WP_077509203.1	dicarboxylate/amino acid:cation symporter	-
BXU08_RS05690 (BXU08_05710)	-	1219973..1220428 (+)	456	WP_171982434.1	hypothetical protein	-
BXU08_RS05695 (BXU08_05715)	-	1220429..1221052 (-)	624	WP_077509205.1	glutathione S-transferase family protein	-
BXU08_RS05700 (BXU08_05720)	recA	1221253..1222323 (-)	1071	WP_077509206.1	recombinase RecA	Machinery gene
BXU08_RS05705 (BXU08_05725)	-	1222475..1223281 (-)	807	WP_077509207.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	-
BXU08_RS05710 (BXU08_05730)	-	1223281..1224729 (-)	1449	WP_150125425.1	tetratricopeptide repeat protein	-
BXU08_RS05715 (BXU08_05735)	-	1224875..1226530 (-)	1656	WP_077509208.1	electron transfer flavoprotein-ubiquinone oxidoreductase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38154.76 Da
• Isoelectric Point: 5.8861

>NTDB_id=216106 BXU08_RS05700 WP_077509206.1 1221253..1222323(-) (recA) [Sphingomonas sp. LM7]
MAASLKVIDGNMAVSTDKQKALEAALAQIDRAFGKGSAMRLGSKETMQVETISTGSLGLDIALGVGGLPRGRVIEVYGPE
SSGKTTLALHVIAEAQRGGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKDRDEIIGNATRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDLGVKAGIVEKSGAWFSYDSIRIGQGRENSKTF
LKENPELCNRLEAAIRARTDQVAEGLMAGPEPDDDI

Nucleotide

• Length: 1071 bp

>NTDB_id=216106 BXU08_RS05700 WP_077509206.1 1221253..1222323(-) (recA) [Sphingomonas sp. LM7]
ATGGCAGCTTCACTCAAGGTGATCGACGGCAACATGGCAGTATCCACGGACAAGCAGAAGGCGCTCGAAGCCGCCCTCGC
ACAGATCGACCGCGCTTTCGGCAAGGGCAGCGCAATGCGCCTAGGTTCGAAGGAGACGATGCAGGTCGAGACGATCTCGA
CCGGTTCGCTCGGTCTCGACATCGCGCTCGGCGTCGGCGGACTGCCGCGCGGCCGCGTCATCGAAGTCTATGGCCCCGAA
AGCTCGGGCAAGACCACGCTCGCGCTCCACGTCATCGCAGAGGCACAGCGGGGCGGTGGCACCGCCGCGTTCGTCGATGC
CGAGCATGCGCTCGATCCGGTCTATGCCAAGAAGCTCGGGGTCAATATCGACGAGCTGATCGTCTCGCAGCCCGATACCG
GCGAGCAGGCGCTCGAGATCGTCGACACGCTCGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTCGCCGCG
CTGGTTCCCCGCGCGGAAATCGAAGGCGAGATGGGCGACAGCCATGTCGGCCTGCAGGCTCGCTTGATGTCGCAGTCGCT
GCGCAAGCTCACCGGCTCGATCAGCCGCTCGCGCTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAAATCGGCGTGA
TGTACGGCAATCCGGAGACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTGCGCCTCGACATCCGCCGTACT
GGCCAGATCAAGGACCGCGACGAGATCATTGGCAACGCGACGCGCGTCAAGGTGGTCAAGAACAAGGTCGCACCGCCGTT
CAAGCAAGTCGAGTTCGACATCATGTATGGCCAGGGCATCTCCAAGATCGGCGAGATCCTCGATCTCGGCGTCAAGGCGG
GCATCGTCGAAAAGTCAGGCGCATGGTTCAGCTATGACAGCATCCGCATCGGCCAGGGTCGTGAGAATTCGAAGACTTTC
CTCAAGGAAAATCCCGAGCTCTGCAACCGGCTTGAAGCTGCGATCCGCGCGCGGACCGATCAGGTCGCCGAGGGGCTGAT
GGCCGGCCCCGAGCCCGACGACGACATCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-281)

3D structure

• AlphaFold DB: A0A1S6FIB4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	68.047	94.944	0.646
recA	Vibrio cholerae strain A1552	71.25	89.888	0.64
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.25	89.888	0.64
recA	Neisseria gonorrhoeae MS11	69.231	91.292	0.632
recA	Neisseria gonorrhoeae strain FA1090	69.231	91.292	0.632
recA	Neisseria gonorrhoeae MS11	69.231	91.292	0.632
recA	Glaesserella parasuis strain SC1401	70.219	89.607	0.629
recA	Acinetobacter baylyi ADP1	65.205	96.067	0.626
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.897	95.225	0.618
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.463	92.135	0.612
recA	Acinetobacter baumannii D1279779	66.77	90.449	0.604
recA	Ralstonia pseudosolanacearum GMI1000	69.805	86.517	0.604
recA	Bacillus subtilis subsp. subtilis str. 168	66.978	90.169	0.604
recA	Helicobacter pylori 26695	61.919	96.629	0.598
recA	Helicobacter pylori strain NCTC11637	61.919	96.629	0.598
recA	Latilactobacillus sakei subsp. sakei 23K	62.315	94.663	0.59
recA	Streptococcus pneumoniae R6	59.882	95.225	0.57
recA	Streptococcus pneumoniae TIGR4	59.882	95.225	0.57
recA	Streptococcus mitis NCTC 12261	59.882	95.225	0.57
recA	Streptococcus mitis SK321	59.882	95.225	0.57
recA	Streptococcus pneumoniae Rx1	59.882	95.225	0.57
recA	Streptococcus pneumoniae D39	59.882	95.225	0.57
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.671	92.135	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.112	95.225	0.553
recA	Streptococcus pyogenes NZ131	60.429	91.573	0.553
recA	Streptococcus mutans UA159	58.735	93.258	0.548