Detailed information NTG0214586

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FORC53_RS02665
• Genome accession: NZ_CP019290
• Coordinates: 538088..539134 (+)
• Length: 348 a.a.
• NCBI ID: WP_118893271.1
• Uniprot ID: A0AAN1UB03
• Organism: Vibrio vulnificus strain FORC_053
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	539479..552289	538088..539134	flank	345
IScluster/Tn	539479..541949	538088..539134	flank	345

Gene organization within MGE regions

Location: 538088..552289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC53_RS02665 (FORC53_0470)	recA	538088..539134 (+)	1047	WP_118893271.1	recombinase RecA	Machinery gene
FORC53_RS02675 (FORC53_0473)	-	539479..540328 (+)	850	Protein_458	IS3 family transposase	-
FORC53_RS02680	-	540331..540603 (-)	273	Protein_459	transposase	-
FORC53_RS02685 (FORC53_0474)	-	540915..541949 (-)	1035	WP_039542229.1	IS110 family transposase	-
FORC53_RS02690 (FORC53_0475)	-	542148..542984 (-)	837	WP_118893274.1	hypothetical protein	-
FORC53_RS02695 (FORC53_0476)	-	542991..544652 (-)	1662	WP_118893276.1	toxin-activating lysine-acyltransferase	-
FORC53_RS02700 (FORC53_0477)	-	544654..545085 (-)	432	WP_118893278.1	toxin-activating lysine-acyltransferase	-
FORC53_RS02705 (FORC53_0478)	-	545082..546536 (-)	1455	WP_198434266.1	hypothetical protein	-
FORC53_RS02710 (FORC53_0479)	-	546533..547696 (-)	1164	WP_118893282.1	glycosyltransferase	-
FORC53_RS02715 (FORC53_0480)	-	547711..549021 (-)	1311	WP_118893284.1	HlyD family efflux transporter periplasmic adaptor subunit	-
FORC53_RS02720 (FORC53_0481)	-	549038..550657 (-)	1620	WP_118893285.1	peptidase domain-containing ABC transporter	-
FORC53_RS02725 (FORC53_0482)	-	550648..552003 (-)	1356	WP_118893287.1	TcdA/TcdB catalytic glycosyltransferase domain-containing protein	-
FORC53_RS02730 (FORC53_0483)	-	552086..552289 (-)	204	WP_118893289.1	hypothetical protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37508.98 Da
• Isoelectric Point: 5.1715

>NTDB_id=214586 FORC53_RS02665 WP_118893271.1 538088..539134(+) (recA) [Vibrio vulnificus strain FORC_053]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLIEKAGAWYSYKGDKIGQGKANACKFISEHHNIAEELDV
KLRELLLTPATEQPAEAINNDVAEDDAF

Nucleotide

• Length: 1047 bp

>NTDB_id=214586 FORC53_RS02665 WP_118893271.1 538088..539134(+) (recA) [Vibrio vulnificus strain FORC_053]
ATGGACGAGAACAAACAGAAGGCTCTGGCCGCCGCACTAGGTCAAATTGAAAAGCAGTTCGGTAAAGGTTCAATCATGCG
CCTAGGTGACAACCGTGCGATGGATGTTGAAACCATCTCGACAGGTTCACTATCTCTGGATATTGCGCTGGGTGCGGGTG
GCTTACCAATGGGCCGTATCGTTGAAATTTTTGGTCCAGAATCTTCAGGTAAAACCACGTTGACCCTTGAGCTGATCGCT
GCGGCTCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCCGAGCACGCGTTGGATCCTGTGTATGCGAAGAAGCTTGG
CGTTAATATCGACCAGTTGTTGGTATCTCAGCCTGACACCGGTGAACAAGCGTTGGAAATCTGTGATGCTCTTGCTCGCT
CAGGTGCGGTTGACGTTATTGTTGTCGACTCTGTTGCAGCATTGACGCCAAAGGCAGAAATCGAAGGTGAGATGGGCGAC
TCGCACATGGGTCTTCAAGCTCGTATGCTATCTCAAGCGATGCGTAAGTTAACGGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACAACGGGTGGTAACGCAC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATCAAAGAAGGTGATGAGGTCGTGGGTAACGAA
ACGCGTATCAAAGTGGTGAAGAATAAGATCGCTGCACCGTTTAAAGAAGCCAACACTCAAATTATGTACGGCCAAGGCTT
TAACCGCGAAGGTGAGTTAATTGACCTTGGTGTCAAGCACAAATTAATTGAGAAAGCAGGTGCTTGGTACAGTTACAAAG
GCGATAAAATTGGTCAGGGTAAAGCGAATGCCTGTAAGTTCATCTCAGAACACCATAATATTGCTGAAGAGCTTGATGTC
AAACTGCGTGAACTGCTGCTTACTCCTGCGACGGAGCAGCCAGCAGAAGCTATAAATAATGATGTTGCTGAGGATGATGC
ATTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	93.994	95.69	0.899
recA	Vibrio cholerae O1 biovar El Tor strain E7946	93.994	95.69	0.899
recA	Pseudomonas stutzeri DSM 10701	71.965	99.425	0.716
recA	Acinetobacter baumannii D1279779	73.716	95.115	0.701
recA	Acinetobacter baylyi ADP1	72.239	96.264	0.695
recA	Glaesserella parasuis strain SC1401	71.605	93.103	0.667
recA	Neisseria gonorrhoeae MS11	68.098	93.678	0.638
recA	Neisseria gonorrhoeae MS11	68.098	93.678	0.638
recA	Neisseria gonorrhoeae strain FA1090	68.098	93.678	0.638
recA	Ralstonia pseudosolanacearum GMI1000	70.159	90.517	0.635
recA	Streptococcus mitis NCTC 12261	59.078	99.713	0.589
recA	Streptococcus mitis SK321	59.078	99.713	0.589
recA	Streptococcus pneumoniae R6	62.848	92.816	0.583
recA	Streptococcus pneumoniae D39	62.848	92.816	0.583
recA	Streptococcus pneumoniae TIGR4	62.848	92.816	0.583
recA	Streptococcus pneumoniae Rx1	62.848	92.816	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.667	0.583
recA	Helicobacter pylori strain NCTC11637	58.772	98.276	0.578
recA	Helicobacter pylori 26695	58.48	98.276	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	95.115	0.575
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.241	0.575
recA	Streptococcus mutans UA159	60.615	93.391	0.566
recA	Streptococcus pyogenes NZ131	60.615	93.391	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.241	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.514	91.092	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.062	92.816	0.557