Detailed information NTG0021038

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DET_RS08205
• Genome accession: NC_002936
• Coordinates: 1438895..1439908 (+)
• Length: 337 a.a.
• NCBI ID: WP_010937277.1
• Uniprot ID: Q3Z648
• Organism: Dehalococcoides mccartyi 195
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1433895..1444908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DET_RS08170 (DET1599)	tatC	1435129..1435914 (-)	786	WP_010937270.1	twin-arginine translocase subunit TatC	-
DET_RS08175 (DET1600)	-	1435911..1436201 (-)	291	WP_010937271.1	Sec-independent protein translocase subunit TatA/TatB	-
DET_RS08180 (DET1601)	-	1436268..1436504 (-)	237	WP_010937272.1	twin-arginine translocase TatA/TatE family subunit	-
DET_RS08185 (DET1602)	tatA	1436588..1436785 (-)	198	WP_010937273.1	twin-arginine translocase TatA/TatE family subunit	-
DET_RS08190 (DET1603)	folP	1437031..1437879 (+)	849	WP_010937274.1	dihydropteroate synthase	-
DET_RS08195 (DET1604)	folK	1437870..1438400 (+)	531	WP_010937275.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
DET_RS08200 (DET1605)	queD	1438400..1438771 (+)	372	WP_010937276.1	6-carboxytetrahydropterin synthase QueD	-
DET_RS08205 (DET1606)	recA	1438895..1439908 (+)	1014	WP_010937277.1	recombinase RecA	Machinery gene
DET_RS08210 (DET1607)	-	1439995..1440639 (+)	645	WP_010937278.1	regulatory protein RecX	-
DET_RS08215 (DET1608)	rny	1440711..1442294 (+)	1584	WP_010937279.1	ribonuclease Y	-
DET_RS08220 (DET1609)	-	1442306..1443076 (+)	771	WP_010937280.1	TIGR00282 family metallophosphoesterase	-
DET_RS08225 (DET1610)	-	1443079..1443942 (+)	864	WP_010937281.1	PHP domain-containing protein	-
DET_RS08230 (DET1611)	-	1443939..1444640 (+)	702	WP_010937282.1	glycerol-3-phosphate acyltransferase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36160.54 Da
• Isoelectric Point: 6.2983

>NTDB_id=21038 DET_RS08205 WP_010937277.1 1438895..1439908(+) (recA) [Dehalococcoides mccartyi 195]
MTTEKDKALELTVGIIEKRFGKGSIMKLSDPTFRQTVEFIPTSSLALDIALGVGGIPRGRISEIFGPEGSGKTTLAQHII
AQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTASIGQTRTAVIFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTVAIGT
RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQGRESAKNYLAANPDLAQEIE
EKIRASAVTLCSIGDGD

Nucleotide

• Length: 1014 bp

>NTDB_id=21038 DET_RS08205 WP_010937277.1 1438895..1439908(+) (recA) [Dehalococcoides mccartyi 195]
ATGACCACGGAAAAAGATAAGGCACTGGAACTCACTGTCGGCATAATAGAAAAGCGTTTTGGCAAGGGTTCAATAATGAA
ACTAAGTGACCCTACCTTCAGGCAGACAGTTGAGTTCATTCCTACAAGTTCACTGGCACTTGATATTGCTTTGGGCGTTG
GCGGGATTCCCAGAGGCCGGATATCTGAAATATTCGGTCCGGAAGGCTCCGGCAAGACGACTCTGGCCCAACATATTATT
GCCCAGGCCCAAAAAATGGGTGAAAAAGCCGCCTACATAGACGTGGAGCATGCCCTTGATCCCAAATACGCTTCAACCTG
CGGGGTTAATCTGGATGAGCTTTTAATATCTCAGCCGGATACCGGTGAAGAAGCGCTTGGTATTGCCGAAGAGCTGGTGA
GAAGCACCGCCATTGGTGTCATAGTGATTGACAGCGTAGCGGCGCTGGTGCCCAAAGCCGAAATAGAAGGCGACATGGGT
GACTCACATGTAGGTCTGCAGGCCAGGCTTATGTCCCAGGCACTGCGTAAACTGACTGCTTCCATCGGGCAAACCAGAAC
GGCCGTAATCTTTATTAACCAGTTGAGAGAAAAAGTGGGTGTTATGTTCGGCAATCCCGAAGTCACCCCCGGCGGCCGGG
CGCTTAAGTTCTACAGTTCGGTGCGTATAGATCTAAGGCGCATAGAAACCATCAAGCAAGGTACCGTAGCAATTGGTACA
CGGGTACGGGCCAAAGTGGTAAAAAACAAGGTTGCTCCCCCTTTCAGGACAGCCGAATTTGATATCATGTTTGACTCAGG
TATCAGCCGCGAGGGCAACCTTATTGATTTAGGCGTAACCAGTGAAGTTATAAGGAAAGCAGGGGCTTTCTTTTCCTATG
GGGACATTCGCCTGGGGCAAGGCAGAGAGAGCGCCAAAAACTATCTGGCGGCAAATCCAGATCTGGCGCAGGAAATTGAA
GAAAAAATACGTGCCTCAGCGGTCACCCTTTGCAGTATTGGTGATGGCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: Q3Z648

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	63.158	95.846	0.605
recA	Bacillus subtilis subsp. subtilis str. 168	63.354	95.549	0.605
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae strain FA1090	60.308	96.439	0.582
recA	Streptococcus pyogenes NZ131	60.308	96.439	0.582
recA	Streptococcus mitis SK321	60	96.439	0.579
recA	Streptococcus mitis NCTC 12261	60	96.439	0.579
recA	Glaesserella parasuis strain SC1401	60.436	95.252	0.576
recA	Streptococcus pneumoniae R6	59.509	96.736	0.576
recA	Streptococcus pneumoniae Rx1	59.509	96.736	0.576
recA	Streptococcus pneumoniae D39	59.509	96.736	0.576
recA	Streptococcus pneumoniae TIGR4	59.509	96.736	0.576
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.327	97.033	0.576
recA	Pseudomonas stutzeri DSM 10701	59.385	96.439	0.573
recA	Lactococcus lactis subsp. cremoris KW2	59.021	97.033	0.573
recA	Streptococcus mutans UA159	59.077	96.439	0.57
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.259	96.142	0.57
recA	Vibrio cholerae strain A1552	58.951	96.142	0.567
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.951	96.142	0.567
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.41	97.033	0.567
recA	Ralstonia pseudosolanacearum GMI1000	61.489	91.691	0.564
recA	Helicobacter pylori strain NCTC11637	58.642	96.142	0.564
recA	Helicobacter pylori 26695	58.642	96.142	0.564
recA	Acinetobacter baylyi ADP1	56.928	98.516	0.561
recA	Acinetobacter baumannii D1279779	55.689	99.11	0.552