Detailed information NTG0205800

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BO996_RS04490
• Genome accession: NZ_CP018101
• Coordinates: 991031..992134 (-)
• Length: 367 a.a.
• NCBI ID: WP_012202806.1
• Uniprot ID: A0A210VWF6
• Organism: Delftia sp. HK171
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 986031..997134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BO996_RS04470 (BO996_04415)	argC	986604..987536 (+)	933	WP_071954121.1	N-acetyl-gamma-glutamyl-phosphate reductase	-
BO996_RS04475 (BO996_04420)	-	987557..989413 (+)	1857	WP_232240465.1	hypothetical protein	-
BO996_RS04480 (BO996_04425)	yddG	989436..990356 (+)	921	WP_071954123.1	aromatic amino acid DMT transporter YddG	-
BO996_RS04485 (BO996_04430)	recX	990353..990829 (-)	477	WP_071954124.1	recombination regulator RecX	-
BO996_RS04490 (BO996_04435)	recA	991031..992134 (-)	1104	WP_012202806.1	recombinase RecA	Machinery gene
BO996_RS04495 (BO996_04440)	-	992282..992782 (+)	501	WP_012202807.1	MarR family transcriptional regulator	-
BO996_RS04500 (BO996_04445)	-	992882..993556 (+)	675	WP_012202808.1	response regulator transcription factor	-
BO996_RS04505 (BO996_04450)	-	993651..995153 (+)	1503	WP_071954125.1	sensor histidine kinase	-
BO996_RS04510 (BO996_04455)	-	995110..996120 (-)	1011	WP_034389800.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38922.61 Da
• Isoelectric Point: 5.3675

>NTDB_id=205800 BO996_RS04490 WP_012202806.1 991031..992134(-) (recA) [Delftia sp. HK171]
MNTAVTTANSEKAKALQAALAQIEKQFGKGTIMRLGEGEAIQDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKT
TLTLQVIAEMQKQGGTCAFIDAEHALDTSYAQKLGVNLNEVLISQPDTGEQALEIVDSLVRSGAVDMIVVDSVAALTPRA
EIEGEMGDQLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTIKK
GDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEILDMGVNAKILDKSGAWYAYNGEKIGQGRDNAREFLRENS
GLAVEIENKVRDSLGIALLPTAGGDAPEAKAAKAGKAKADKDGVIEA

Nucleotide

• Length: 1104 bp

>NTDB_id=205800 BO996_RS04490 WP_012202806.1 991031..992134(-) (recA) [Delftia sp. HK171]
ATGAACACCGCCGTCACCACCGCCAACAGTGAAAAAGCCAAGGCCCTGCAGGCCGCACTCGCCCAGATCGAAAAGCAGTT
CGGCAAGGGCACGATCATGCGCCTGGGTGAAGGCGAAGCCATCCAGGACATCCAGGTCGTCTCCACCGGCTCGCTGGGCT
TGGACATCGCCCTGGGCGTTGGCGGCCTGCCCCGTGGCCGCGTGATCGAGATCTACGGCCCTGAATCCTCGGGCAAGACC
ACGCTGACGCTGCAGGTCATCGCCGAAATGCAAAAGCAGGGCGGCACCTGCGCCTTCATCGACGCCGAGCACGCACTGGA
CACCAGCTACGCCCAGAAGCTGGGCGTGAACCTCAACGAAGTGCTGATCAGCCAGCCCGATACCGGCGAGCAGGCCCTGG
AAATCGTGGACAGCCTGGTGCGCTCGGGCGCCGTGGACATGATCGTCGTGGACTCGGTGGCCGCCCTCACACCCCGGGCC
GAAATCGAAGGCGAGATGGGCGACCAGCTGCCCGGCCTGCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACAGC
CACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCCG
AAACCACCACGGGCGGCAATGCGTTGAAGTTCTACGCCTCGGTCCGCTTGGACATCCGCCGCACCGGCACCATCAAGAAG
GGCGACGAGGCCATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTCTCGCCTCCGTTCAAGACCGCCGAGTT
CGACATCCTCTTCGGCGAAGGCATCTCGCGCGAAGGTGAAATCCTGGACATGGGCGTCAACGCCAAGATCCTCGACAAGT
CGGGCGCCTGGTATGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAATTCCTGCGCGAGAACAGC
GGCCTGGCCGTGGAGATCGAGAACAAGGTGCGCGACAGCCTGGGCATCGCCCTGCTGCCCACGGCCGGTGGCGATGCCCC
CGAAGCCAAGGCCGCCAAGGCGGGCAAGGCCAAGGCCGACAAGGACGGCGTGATCGAAGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (14-276)

3D structure

• AlphaFold DB: A0A210VWF6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	81.21	85.559	0.695
recA	Neisseria gonorrhoeae MS11	67.919	94.278	0.64
recA	Neisseria gonorrhoeae strain FA1090	67.919	94.278	0.64
recA	Neisseria gonorrhoeae MS11	67.919	94.278	0.64
recA	Glaesserella parasuis strain SC1401	70.06	91.008	0.638
recA	Pseudomonas stutzeri DSM 10701	70.859	88.828	0.629
recA	Acinetobacter baumannii D1279779	70.245	88.828	0.624
recA	Acinetobacter baylyi ADP1	69.939	88.828	0.621
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.325	88.828	0.616
recA	Vibrio cholerae strain A1552	69.325	88.828	0.616
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.172	91.826	0.608
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.565	89.646	0.597
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	89.101	0.575
recA	Streptococcus mutans UA159	58.611	98.093	0.575
recA	Helicobacter pylori 26695	64.329	89.373	0.575
recA	Helicobacter pylori strain NCTC11637	64.329	89.373	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	63.063	90.736	0.572
recA	Streptococcus pyogenes NZ131	62.614	89.646	0.561
recA	Streptococcus pneumoniae D39	61.631	90.191	0.556
recA	Streptococcus pneumoniae TIGR4	61.631	90.191	0.556
recA	Streptococcus pneumoniae Rx1	61.631	90.191	0.556
recA	Streptococcus pneumoniae R6	61.631	90.191	0.556
recA	Streptococcus mitis SK321	61.329	90.191	0.553
recA	Streptococcus mitis NCTC 12261	61.329	90.191	0.553
recA	Lactococcus lactis subsp. cremoris KW2	61.329	90.191	0.553
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.76	90.736	0.542