Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | BI355_RS07810 | Genome accession | NZ_CP017996 |
| Coordinates | 1575419..1576528 (-) | Length | 369 a.a. |
| NCBI ID | WP_057866933.1 | Uniprot ID | A0A837RIX0 |
| Organism | Companilactobacillus crustorum strain MN047 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1543199..1617296 | 1575419..1576528 | within | 0 |
Gene organization within MGE regions
Location: 1543199..1617296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI355_RS07675 (BI355_1526) | uvrB | 1545860..1547869 (-) | 2010 | WP_057866960.1 | excinuclease ABC subunit UvrB | - |
| BI355_RS07680 | - | 1547992..1549236 (-) | 1245 | Protein_1494 | MFS transporter | - |
| BI355_RS07685 (BI355_1527) | - | 1549251..1550543 (-) | 1293 | WP_075887900.1 | alkaline phosphatase family protein | - |
| BI355_RS07690 (BI355_1528) | - | 1550714..1552432 (-) | 1719 | WP_057866957.1 | phospho-sugar mutase | - |
| BI355_RS07695 (BI355_1529) | - | 1552566..1552820 (-) | 255 | WP_057866956.1 | helix-turn-helix domain-containing protein | - |
| BI355_RS07700 (BI355_1530) | trxB | 1552994..1553935 (-) | 942 | WP_057866955.1 | thioredoxin-disulfide reductase | - |
| BI355_RS07705 (BI355_1531) | lgt | 1554000..1554815 (-) | 816 | WP_075887901.1 | prolipoprotein diacylglyceryl transferase | - |
| BI355_RS07710 (BI355_1532) | hprK | 1554815..1555774 (-) | 960 | WP_057866953.1 | HPr(Ser) kinase/phosphatase | - |
| BI355_RS07715 (BI355_1533) | - | 1555841..1556206 (-) | 366 | WP_057866952.1 | phage holin family protein | - |
| BI355_RS07720 (BI355_1534) | - | 1556235..1556486 (-) | 252 | WP_057866951.1 | PspC domain-containing protein | - |
| BI355_RS07725 (BI355_1535) | phoU | 1556548..1557228 (-) | 681 | WP_057866950.1 | phosphate signaling complex protein PhoU | - |
| BI355_RS07730 (BI355_1536) | pstB | 1557241..1557999 (-) | 759 | WP_057866949.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| BI355_RS07735 (BI355_1537) | pstB | 1558012..1558818 (-) | 807 | WP_057866948.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| BI355_RS07740 (BI355_1538) | pstA | 1558822..1559709 (-) | 888 | WP_075887902.1 | phosphate ABC transporter permease PstA | - |
| BI355_RS07745 (BI355_1539) | pstC | 1559709..1560629 (-) | 921 | WP_075887903.1 | phosphate ABC transporter permease subunit PstC | - |
| BI355_RS07750 (BI355_1540) | - | 1560631..1561506 (-) | 876 | WP_057866945.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| BI355_RS07755 (BI355_1541) | - | 1561604..1563253 (-) | 1650 | WP_057866944.1 | sensor histidine kinase | - |
| BI355_RS07760 (BI355_1542) | - | 1563256..1563921 (-) | 666 | WP_057866943.1 | response regulator transcription factor | - |
| BI355_RS07770 (BI355_1544) | secA | 1565073..1567433 (-) | 2361 | WP_057866941.1 | preprotein translocase subunit SecA | - |
| BI355_RS07775 (BI355_1545) | hpf | 1567643..1568191 (-) | 549 | WP_057866940.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| BI355_RS11780 (BI355_1546) | comFC | 1568288..1568557 (-) | 270 | WP_232230814.1 | ComF family protein | Machinery gene |
| BI355_RS07785 (BI355_1547) | - | 1568965..1570272 (-) | 1308 | WP_156866616.1 | DEAD/DEAH box helicase family protein | - |
| BI355_RS07790 (BI355_1548) | - | 1570302..1570940 (+) | 639 | WP_057866936.1 | YigZ family protein | - |
| BI355_RS07795 (BI355_1549) | - | 1571594..1572358 (-) | 765 | WP_057866935.1 | helix-turn-helix domain-containing protein | - |
| BI355_RS07800 (BI355_1550) | - | 1572501..1573586 (-) | 1086 | WP_057866996.1 | glycosyltransferase family 4 protein | - |
| BI355_RS07805 (BI355_1551) | rny | 1573706..1575271 (-) | 1566 | WP_075887907.1 | ribonuclease Y | - |
| BI355_RS07810 (BI355_1552) | recA | 1575419..1576528 (-) | 1110 | WP_057866933.1 | recombinase RecA | Machinery gene |
| BI355_RS07815 (BI355_1553) | - | 1576617..1577159 (-) | 543 | WP_057866932.1 | CinA family protein | - |
| BI355_RS07820 (BI355_1554) | pgsA | 1577183..1577767 (-) | 585 | WP_057866931.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BI355_RS07825 (BI355_1555) | - | 1577847..1578695 (-) | 849 | WP_075887908.1 | helix-turn-helix domain-containing protein | - |
| BI355_RS07830 (BI355_1556) | ymfI | 1578761..1579483 (-) | 723 | WP_057866929.1 | elongation factor P 5-aminopentanone reductase | - |
| BI355_RS07835 (BI355_1557) | yfmH | 1579487..1580725 (-) | 1239 | WP_075887909.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| BI355_RS07840 (BI355_1558) | yfmF | 1580727..1582001 (-) | 1275 | WP_075887910.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| BI355_RS07845 (BI355_1559) | - | 1581998..1584397 (-) | 2400 | WP_075887911.1 | DNA translocase FtsK | - |
| BI355_RS07850 (BI355_1560) | - | 1584481..1584894 (-) | 414 | WP_075887912.1 | DUF1149 family protein | - |
| BI355_RS07855 (BI355_1561) | - | 1584916..1585845 (-) | 930 | WP_075887535.1 | IS30-like element ISLpl1 family transposase | - |
| BI355_RS07860 (BI355_1562) | trmL | 1585951..1586460 (-) | 510 | WP_075887913.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| BI355_RS07865 (BI355_1563) | - | 1586648..1587859 (-) | 1212 | WP_057866923.1 | AI-2E family transporter | - |
| BI355_RS07870 (BI355_1564) | - | 1587936..1588955 (+) | 1020 | WP_075887914.1 | lactonase family protein | - |
| BI355_RS07875 (BI355_1565) | - | 1588989..1589828 (+) | 840 | WP_057866921.1 | undecaprenyl-diphosphate phosphatase | - |
| BI355_RS07880 (BI355_1566) | - | 1589912..1590556 (+) | 645 | WP_057866995.1 | copper homeostasis protein CutC | - |
| BI355_RS07885 | - | 1591001..1591372 (+) | 372 | WP_075887915.1 | GntR family transcriptional regulator | - |
| BI355_RS12005 | - | 1591618..1591797 (+) | 180 | WP_418235946.1 | transposase | - |
| BI355_RS07905 (BI355_1571) | - | 1592991..1593764 (-) | 774 | WP_075887918.1 | ABC transporter permease | - |
| BI355_RS07910 (BI355_1572) | - | 1593766..1594668 (-) | 903 | WP_075888311.1 | ABC transporter ATP-binding protein | - |
| BI355_RS11565 (BI355_1573) | - | 1594933..1595049 (+) | 117 | WP_156866617.1 | bacteriocin | - |
| BI355_RS12010 | - | 1595290..1595577 (+) | 288 | WP_075887919.1 | cysteine peptidase family C39 domain-containing protein | - |
| BI355_RS07920 (BI355_1576) | - | 1595574..1597304 (+) | 1731 | WP_075887920.1 | peptide cleavage/export ABC transporter | - |
| BI355_RS07930 (BI355_1577) | - | 1597399..1598328 (+) | 930 | WP_075887922.1 | IS30-like element ISLpl1 family transposase | - |
| BI355_RS07940 (BI355_1578) | mgtE | 1598965..1600338 (-) | 1374 | WP_057867483.1 | magnesium transporter | - |
| BI355_RS07945 (BI355_1579) | - | 1600331..1601251 (-) | 921 | WP_057867482.1 | RluA family pseudouridine synthase | - |
| BI355_RS07950 (BI355_1580) | - | 1601238..1602050 (-) | 813 | WP_075887924.1 | NAD kinase | - |
| BI355_RS07955 (BI355_1581) | - | 1602050..1602703 (-) | 654 | WP_057867480.1 | GTP pyrophosphokinase | - |
| BI355_RS07960 (BI355_1582) | - | 1602851..1603498 (+) | 648 | WP_057867479.1 | DsbA family protein | - |
| BI355_RS07965 | - | 1603626..1603853 (-) | 228 | WP_075887925.1 | hypothetical protein | - |
| BI355_RS07970 (BI355_1585) | - | 1603989..1604918 (+) | 930 | WP_075887535.1 | IS30-like element ISLpl1 family transposase | - |
| BI355_RS07975 (BI355_1586) | - | 1604928..1605536 (-) | 609 | WP_075887926.1 | competence protein CoiA | - |
| BI355_RS07980 (BI355_1587) | - | 1605620..1606297 (-) | 678 | WP_057867477.1 | adaptor protein MecA | - |
| BI355_RS07985 (BI355_1588) | - | 1606433..1609060 (-) | 2628 | WP_075887927.1 | BspA family leucine-rich repeat surface protein | - |
| BI355_RS07990 | spxA | 1609270..1609668 (-) | 399 | WP_075887928.1 | transcriptional regulator SpxA | - |
| BI355_RS07995 (BI355_1590) | - | 1609927..1610652 (-) | 726 | WP_075887929.1 | MBL fold metallo-hydrolase | - |
| BI355_RS08000 (BI355_1591) | - | 1610697..1611149 (+) | 453 | WP_057867472.1 | hypothetical protein | - |
| BI355_RS08005 (BI355_1592) | - | 1611139..1613139 (-) | 2001 | WP_075887930.1 | ABC transporter permease | - |
| BI355_RS08010 (BI355_1593) | - | 1613120..1613890 (-) | 771 | WP_418235934.1 | ABC transporter ATP-binding protein | - |
| BI355_RS08015 (BI355_1594) | - | 1613969..1614643 (+) | 675 | WP_057867469.1 | response regulator transcription factor | - |
| BI355_RS08020 (BI355_1595) | - | 1614655..1615647 (+) | 993 | WP_057867468.1 | sensor histidine kinase | - |
| BI355_RS08025 (BI355_1596) | relB | 1615709..1615936 (-) | 228 | WP_075887932.1 | type II toxin-antitoxin system RelB family antitoxin | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 39851.02 Da Isoelectric Point: 4.7187
>NTDB_id=204932 BI355_RS07810 WP_057866933.1 1575419..1576528(-) (recA) [Companilactobacillus crustorum strain MN047]
MAKDERQKALDVALKKIEKDFGKGAIMRMGDDLNTQISTVSTGSLALDNALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKEGGTAAYIDAENAMDPAYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDIVVVDSVAALVPRAEIEGDMG
DSHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIMFGNPETTPGGRALKFYSTIRLEVRRAEQIKDGTDVIGN
RTKIKVVKNKVAPPFKVALVDIMYGHGISQTGELVDMAVDKDIIEKAGSWYSYGDERIGQGRENAKTYLAENPEKMDEIK
KKVRSAYGMDGKPEDDENDSTDSDPKDKTEAKDDKELDLNLDSDKKETK
MAKDERQKALDVALKKIEKDFGKGAIMRMGDDLNTQISTVSTGSLALDNALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKEGGTAAYIDAENAMDPAYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDIVVVDSVAALVPRAEIEGDMG
DSHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIMFGNPETTPGGRALKFYSTIRLEVRRAEQIKDGTDVIGN
RTKIKVVKNKVAPPFKVALVDIMYGHGISQTGELVDMAVDKDIIEKAGSWYSYGDERIGQGRENAKTYLAENPEKMDEIK
KKVRSAYGMDGKPEDDENDSTDSDPKDKTEAKDDKELDLNLDSDKKETK
Nucleotide
Download Length: 1110 bp
>NTDB_id=204932 BI355_RS07810 WP_057866933.1 1575419..1576528(-) (recA) [Companilactobacillus crustorum strain MN047]
TTGGCTAAAGATGAACGACAAAAAGCTTTAGATGTAGCTTTAAAAAAGATTGAAAAGGACTTTGGTAAGGGTGCCATCAT
GAGAATGGGTGATGACCTAAATACTCAAATCTCAACGGTTTCTACTGGTTCGTTAGCTCTCGATAACGCTTTAGGTGTCG
GTGGCTTTCCACGTGGAAGAATCGTTGAAATTTATGGACCTGAAAGTTCTGGCAAGACAACTGTAGCATTACATGCTGTG
GCTGAAGTTCAAAAAGAAGGCGGTACAGCCGCATATATTGATGCTGAAAATGCAATGGACCCAGCTTATGCAACAGCTTT
AGGCGTAAATATTGATGATTTATTGCTATCGCAGCCAGATACTGGTGAACAAGGTCTTGAAATTGCTGATGCTTTGGTAT
CTAGTGGTGCTGTTGATATTGTCGTCGTCGATTCTGTTGCCGCTTTGGTTCCACGTGCTGAAATTGAGGGTGACATGGGT
GATTCTCATGTTGGATTGCAAGCCAGATTGATGTCGCAAGCTTTGCGTAAACTTTCTGGATCAATCAACAAAACAAAAAC
AATTGCTCTTTTCATTAATCAAATTCGTGAAAAAGTCGGTATTATGTTTGGTAATCCAGAAACAACACCTGGTGGTCGTG
CTTTGAAGTTCTATTCGACAATCAGACTAGAAGTCCGTCGTGCCGAACAAATTAAAGATGGTACAGATGTTATTGGTAAC
CGTACTAAGATTAAAGTCGTTAAGAACAAGGTTGCACCACCATTCAAAGTTGCACTTGTCGATATTATGTATGGACATGG
TATTTCTCAAACTGGTGAGTTAGTTGATATGGCTGTTGATAAGGATATTATCGAAAAGGCTGGATCATGGTACTCATATG
GTGATGAGAGAATTGGTCAAGGTCGCGAGAATGCGAAGACCTATTTGGCAGAAAATCCCGAAAAGATGGACGAGATCAAG
AAGAAGGTTCGTTCAGCTTATGGTATGGATGGAAAACCTGAAGACGATGAAAATGATTCGACTGATAGTGATCCAAAGGA
CAAAACTGAAGCAAAAGATGATAAAGAATTAGATTTAAATCTTGATTCTGATAAAAAAGAAACAAAATAA
TTGGCTAAAGATGAACGACAAAAAGCTTTAGATGTAGCTTTAAAAAAGATTGAAAAGGACTTTGGTAAGGGTGCCATCAT
GAGAATGGGTGATGACCTAAATACTCAAATCTCAACGGTTTCTACTGGTTCGTTAGCTCTCGATAACGCTTTAGGTGTCG
GTGGCTTTCCACGTGGAAGAATCGTTGAAATTTATGGACCTGAAAGTTCTGGCAAGACAACTGTAGCATTACATGCTGTG
GCTGAAGTTCAAAAAGAAGGCGGTACAGCCGCATATATTGATGCTGAAAATGCAATGGACCCAGCTTATGCAACAGCTTT
AGGCGTAAATATTGATGATTTATTGCTATCGCAGCCAGATACTGGTGAACAAGGTCTTGAAATTGCTGATGCTTTGGTAT
CTAGTGGTGCTGTTGATATTGTCGTCGTCGATTCTGTTGCCGCTTTGGTTCCACGTGCTGAAATTGAGGGTGACATGGGT
GATTCTCATGTTGGATTGCAAGCCAGATTGATGTCGCAAGCTTTGCGTAAACTTTCTGGATCAATCAACAAAACAAAAAC
AATTGCTCTTTTCATTAATCAAATTCGTGAAAAAGTCGGTATTATGTTTGGTAATCCAGAAACAACACCTGGTGGTCGTG
CTTTGAAGTTCTATTCGACAATCAGACTAGAAGTCCGTCGTGCCGAACAAATTAAAGATGGTACAGATGTTATTGGTAAC
CGTACTAAGATTAAAGTCGTTAAGAACAAGGTTGCACCACCATTCAAAGTTGCACTTGTCGATATTATGTATGGACATGG
TATTTCTCAAACTGGTGAGTTAGTTGATATGGCTGTTGATAAGGATATTATCGAAAAGGCTGGATCATGGTACTCATATG
GTGATGAGAGAATTGGTCAAGGTCGCGAGAATGCGAAGACCTATTTGGCAGAAAATCCCGAAAAGATGGACGAGATCAAG
AAGAAGGTTCGTTCAGCTTATGGTATGGATGGAAAACCTGAAGACGATGAAAATGATTCGACTGATAGTGATCCAAAGGA
CAAAACTGAAGCAAAAGATGATAAAGAATTAGATTTAAATCTTGATTCTGATAAAAAAGAAACAAAATAA
Similar proteins
Only experimentally validated proteins are listed.