Detailed information NTG0195740

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BG023_RS10970
• Genome accession: NZ_CP017113
• Coordinates: 2286137..2287204 (-)
• Length: 355 a.a.
• NCBI ID: WP_069310488.1
• Uniprot ID: -
• Organism: Porphyrobacter sp. LM 6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2281137..2292204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG023_RS10960 (BG023_112223)	-	2282698..2283099 (+)	402	WP_069310486.1	GFA family protein	-
BG023_RS10965 (BG023_112224)	alaS	2283112..2285784 (-)	2673	WP_069310487.1	alanine--tRNA ligase	-
BG023_RS10970 (BG023_112225)	recA	2286137..2287204 (-)	1068	WP_069310488.1	recombinase RecA	Machinery gene
BG023_RS10975 (BG023_112226)	-	2287335..2288960 (-)	1626	WP_150122859.1	hypothetical protein	-
BG023_RS10980 (BG023_112227)	-	2288971..2290461 (-)	1491	WP_069310490.1	DUF4139 domain-containing protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38271.79 Da
• Isoelectric Point: 5.0828

>NTDB_id=195740 BG023_RS10970 WP_069310488.1 2286137..2287204(-) (recA) [Porphyrobacter sp. LM 6]
MATQLKLVEEDKKAVDRQKALEAALAQIDRAFGKGSAMKLGSKEAMQVEAISTGSLGLDIALGIGGLPRGRVIEVYGPES
SGKTTLALHVIAEAQKMGGTAAFVDAEHALDPVYAKKLGVDIDELIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAAL
VPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTG
QIKDRDEIIGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGSWFSYDSIRIGQGRENAKTYL
KDNPEVCDRLEAAIRSRTDEVAGEMMSGPDADSDE

Nucleotide

• Length: 1068 bp

>NTDB_id=195740 BG023_RS10970 WP_069310488.1 2286137..2287204(-) (recA) [Porphyrobacter sp. LM 6]
ATGGCGACGCAGTTGAAATTGGTCGAAGAGGACAAAAAAGCCGTGGATCGTCAAAAGGCTCTGGAAGCCGCGCTTGCGCA
GATTGATCGTGCCTTTGGCAAGGGTTCGGCGATGAAGCTGGGCTCGAAGGAAGCGATGCAGGTCGAAGCGATTTCGACCG
GTTCGCTGGGCCTTGATATCGCGCTCGGGATCGGCGGCCTGCCGCGCGGCCGCGTGATCGAAGTCTACGGGCCGGAAAGC
TCGGGCAAGACCACGCTGGCGCTGCATGTGATTGCCGAAGCGCAGAAGATGGGCGGCACGGCGGCTTTCGTGGACGCGGA
ACACGCGCTCGATCCGGTCTATGCCAAGAAGCTCGGCGTCGACATTGACGAGCTGATCGTCTCTCAGCCCGACACCGGCG
AACAGGCGCTCGAAATCACCGATACGCTGGTGCGCTCCAACGCGATCGATGTGCTGGTGGTCGATTCGGTCGCGGCGCTG
GTGCCGCGCGCGGAAATCGAAGGCGAGATGGGCGATTCGCACGTCGGCCTTCAGGCTCGCCTGATGTCGCAGTCGCTGCG
CAAGCTCACCGGCTCGATCAGCCGCTCGCGTTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGGGTGATGT
ACGGCAATCCGGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTATGCCTCGGTCCGTCTCGACATCCGTCGCACCGGA
CAGATCAAGGATCGTGACGAGATTATCGGCAACACCACGCGGGTGAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCAA
GCAGGTCGAATTCGACATCATGTATGGCGAAGGCATCTCGAAGATCGGCGAAATCCTCGACCTTGGCGTGAAGGCCGGCC
TGGTCGAGAAGTCGGGGAGCTGGTTCTCCTATGATTCGATCCGCATCGGGCAGGGGCGTGAAAACGCCAAGACCTACCTT
AAGGACAATCCTGAAGTTTGCGACCGCTTGGAAGCTGCGATCCGCAGCCGCACCGATGAGGTCGCCGGGGAAATGATGTC
AGGGCCGGACGCGGACTCGGACGAATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	65.722	99.437	0.654
recA	Vibrio cholerae strain A1552	67.463	94.366	0.637
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.463	94.366	0.637
recA	Pseudomonas stutzeri DSM 10701	70.186	90.704	0.637
recA	Neisseria gonorrhoeae MS11	68.944	90.704	0.625
recA	Neisseria gonorrhoeae MS11	68.944	90.704	0.625
recA	Neisseria gonorrhoeae strain FA1090	68.944	90.704	0.625
recA	Acinetobacter baylyi ADP1	64.706	95.775	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.463	92.394	0.614
recA	Bacillus subtilis subsp. subtilis str. 168	67.081	90.704	0.608
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.343	96.056	0.608
recA	Acinetobacter baumannii D1279779	66.77	90.704	0.606
recA	Helicobacter pylori strain NCTC11637	62.391	96.62	0.603
recA	Helicobacter pylori 26695	62.099	96.62	0.6
recA	Ralstonia pseudosolanacearum GMI1000	68.387	87.324	0.597
recA	Streptococcus pneumoniae TIGR4	58.774	100	0.594
recA	Streptococcus pneumoniae Rx1	58.774	100	0.594
recA	Streptococcus pneumoniae D39	58.774	100	0.594
recA	Streptococcus pneumoniae R6	58.774	100	0.594
recA	Streptococcus mitis NCTC 12261	58.924	99.437	0.586
recA	Streptococcus mitis SK321	59.429	98.592	0.586
recA	Streptococcus pyogenes NZ131	60.058	96.62	0.58
recA	Latilactobacillus sakei subsp. sakei 23K	64.174	90.423	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.585	92.394	0.569
recA	Streptococcus mutans UA159	58.944	96.056	0.566
recA	Lactococcus lactis subsp. cremoris KW2	58.309	96.62	0.563