Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   BEN76_RS07015 Genome accession   NZ_CP016896
Coordinates   1450930..1451982 (+) Length   350 a.a.
NCBI ID   WP_025094874.1    Uniprot ID   A0A0M1I2S1
Organism   Acinetobacter soli strain GFJ2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1445930..1456982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN76_RS06985 (BEN76_06985) rraA 1446375..1446890 (-) 516 WP_076032688.1 ribonuclease E activity regulator RraA -
  BEN76_RS06990 (BEN76_06990) - 1446903..1447568 (-) 666 WP_076032689.1 NAD-dependent epimerase/dehydratase family protein -
  BEN76_RS06995 (BEN76_06995) rpsT 1447777..1448046 (+) 270 WP_004925626.1 30S ribosomal protein S20 -
  BEN76_RS07000 (BEN76_07000) - 1448114..1448851 (-) 738 WP_076032690.1 histidine phosphatase family protein -
  BEN76_RS07005 (BEN76_07005) - 1448908..1449768 (-) 861 WP_076032691.1 3'(2'),5'-bisphosphate nucleotidase CysQ family protein -
  BEN76_RS07010 (BEN76_07010) - 1450328..1450771 (+) 444 WP_025094875.1 RNA-binding S4 domain-containing protein -
  BEN76_RS07015 (BEN76_07015) recA 1450930..1451982 (+) 1053 WP_025094874.1 recombinase RecA Machinery gene
  BEN76_RS07020 (BEN76_07020) - 1452033..1452512 (+) 480 WP_076032692.1 regulatory protein RecX -
  BEN76_RS07030 (BEN76_07030) - 1452927..1453772 (+) 846 WP_076032693.1 YbgF trimerization domain-containing protein -
  BEN76_RS07035 (BEN76_07035) lpxA 1453816..1454604 (-) 789 WP_076032694.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  BEN76_RS07040 (BEN76_07040) fabZ 1454601..1455086 (-) 486 WP_167561087.1 3-hydroxyacyl-ACP dehydratase FabZ -
  BEN76_RS07045 (BEN76_07045) lpxD 1455093..1456163 (-) 1071 WP_076032696.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  BEN76_RS07050 (BEN76_07050) - 1456167..1456667 (-) 501 WP_004936804.1 OmpH family outer membrane protein -

Sequence

Protein


Download         Length: 350 a.a.        Molecular weight: 37968.30 Da        Isoelectric Point: 5.0274

>NTDB_id=193514 BEN76_RS07015 WP_025094874.1 1450930..1451982(+) (recA) [Acinetobacter soli strain GFJ2]
MDDNKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIENLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQGKNNVIRYFEENPSISAEIER
AIREQLLTKNTDPAAAHDDEPEEQPDFIES

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=193514 BEN76_RS07015 WP_025094874.1 1450930..1451982(+) (recA) [Acinetobacter soli strain GFJ2]
ATGGATGATAATAAAAGTAAGGCATTACAAGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTTATGCG
CTTAGGCGACAATACCGTGCAAGCCGTTGAAGCTGTTTCTACAGGTTCGCTCACGCTTGATATTGCGCTTGGCATTGGAG
GTTTACCGAAGGGTCGTATTGTTGAAATTTATGGTCCTGAATCCTCAGGTAAAACCACCATGACATTACAGGCAATTGCT
CAATGTCAAAAATCTGGCGGTACATGTGCATTTATCGATGCAGAACATGCACTAGATCCTCAATACGCACGCAAGCTCGG
TGTTGATATTGAAAATCTTTTAGTTTCTCAGCCAGACAATGGTGAACAAGCTCTAGAAATCGCGGATATGCTGGTTCGCT
CGGGTGCGATTGATCTAATCGTGGTCGACTCGGTTGCCGCATTGACCCCAAAAGCTGAAATTGAAGGTGAAATGGGCGAC
TCACATATGGGCTTGCAAGCCCGCTTGATGAGTCAAGCGCTACGTAAAATTACGGGTAATGCCAAACGCTCTAATTGCAT
GGTGATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGAAGCCCTGAAACCACAACGGGCGGTAATGCAC
TTAAATTTTATGCATCTGTTCGATTGGATATCCGTCGTATTGGCCAAGTAAAAGAAGGTGACGAAATCGTCGGTTCTGAA
ACTAAAGTAAAAGTGGTTAAGAACAAAATGGCCCCTCCTTTTCGCGAAGCTATTTTCCAGATCCTGTACGGTAAAGGTGT
TAACCAGTTAGGTGAACTTGTCGATCTCGCAGTTCAACAAAATATTGTTCAAAAAGCAGGTGCTTGGTATTCATATCAAG
GCAACAAAATTGGACAAGGTAAAAATAACGTGATTCGTTATTTTGAGGAAAATCCAAGTATTTCGGCAGAAATTGAACGC
GCTATTCGCGAACAATTGCTCACCAAAAATACAGATCCAGCCGCTGCGCATGATGATGAGCCAGAAGAACAGCCCGACTT
TATTGAAAGTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M1I2S1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

94.857

100

0.949
  recA Acinetobacter baumannii D1279779

93.103

99.429

0.926
  recA Pseudomonas stutzeri DSM 10701

74.925

95.714

0.717
  recA Vibrio cholerae strain A1552

73.089

93.429

0.683
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.089

93.429

0.683
  recA Ralstonia pseudosolanacearum GMI1000

69.851

95.714

0.669
  recA Glaesserella parasuis strain SC1401

71.605

92.571

0.663
  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646
  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646
  recA Neisseria gonorrhoeae strain FA1090

69.753

92.571

0.646
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.209

98.286

0.611
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.772

95.429

0.609
  recA Helicobacter pylori strain NCTC11637

63.609

93.429

0.594
  recA Helicobacter pylori 26695

63.303

93.429

0.591
  recA Streptococcus mitis SK321

59.531

97.429

0.58
  recA Streptococcus pneumoniae Rx1

58.166

99.714

0.58
  recA Streptococcus pneumoniae D39

58.166

99.714

0.58
  recA Streptococcus pneumoniae R6

58.166

99.714

0.58
  recA Streptococcus pneumoniae TIGR4

58.166

99.714

0.58
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.654

92.571

0.58
  recA Bacillus subtilis subsp. subtilis str. 168

62.422

92

0.574
  recA Streptococcus mutans UA159

61.162

93.429

0.571
  recA Streptococcus pyogenes NZ131

61.231

92.857

0.569
  recA Streptococcus mitis NCTC 12261

61.043

93.143

0.569
  recA Lactococcus lactis subsp. cremoris KW2

58.514

92.286

0.54
  recA Latilactobacillus sakei subsp. sakei 23K

58.255

91.714

0.534

Multiple sequence alignment