Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   BFG52_RS10235 Genome accession   NZ_CP016895
Coordinates   2266231..2267280 (+) Length   349 a.a.
NCBI ID   WP_067555636.1    Uniprot ID   A0A1B2M0J1
Organism   Acinetobacter larvae strain BRTC-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2261231..2272280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFG52_RS10205 (BFG52_10205) rraA 2261460..2261969 (-) 510 WP_067555618.1 ribonuclease E activity regulator RraA -
  BFG52_RS10210 (BFG52_10210) rpsT 2262360..2262626 (+) 267 WP_067555621.1 30S ribosomal protein S20 -
  BFG52_RS10215 (BFG52_10215) - 2262871..2263641 (-) 771 WP_067555624.1 histidine phosphatase family protein -
  BFG52_RS10220 (BFG52_10220) - 2263705..2264559 (-) 855 WP_067555627.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  BFG52_RS10225 (BFG52_10225) - 2264925..2265581 (+) 657 WP_067555630.1 HAD-IA family hydrolase -
  BFG52_RS10230 (BFG52_10230) - 2265608..2266048 (+) 441 WP_067555633.1 RNA-binding S4 domain-containing protein -
  BFG52_RS10235 (BFG52_10235) recA 2266231..2267280 (+) 1050 WP_067555636.1 recombinase RecA Machinery gene
  BFG52_RS10240 (BFG52_10240) - 2267363..2268040 (+) 678 WP_067555639.1 regulatory protein RecX -
  BFG52_RS10250 (BFG52_10250) - 2268690..2269520 (+) 831 WP_067555642.1 YbgF trimerization domain-containing protein -
  BFG52_RS10255 (BFG52_10255) dnaB 2270135..2271574 (+) 1440 WP_067555646.1 replicative DNA helicase -

Sequence

Protein


Download         Length: 349 a.a.        Molecular weight: 37679.23 Da        Isoelectric Point: 5.7598

>NTDB_id=193496 BFG52_RS10235 WP_067555636.1 2266231..2267280(+) (recA) [Acinetobacter larvae strain BRTC-1]
MDENKSKALNAALSQIEKQFGKNTVMRLGENTVQAVEAISTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKKGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAVDMIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRAGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEALFQIMYGKGTNHLAELVDLAVQLELVQKAGAWYSYQGSKIGQGKNNAIRHLEENTQLAQDLDR
MIRDQLLAKTVPAEESPAEPVADGDLLDA

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=193496 BFG52_RS10235 WP_067555636.1 2266231..2267280(+) (recA) [Acinetobacter larvae strain BRTC-1]
ATGGATGAAAATAAAAGCAAAGCGCTCAATGCCGCATTAAGTCAAATTGAAAAACAATTTGGTAAAAATACAGTCATGCG
CTTAGGTGAAAATACTGTACAAGCGGTTGAAGCAATATCAACAGGTTCCCTAACCTTAGATATTGCCTTAGGCATTGGTG
GTTTGCCCAAAGGTCGTATTGTCGAAATCTACGGTCCAGAATCCTCAGGTAAAACAACCATGACGCTGCAAGCCATTGCA
CAATGTCAAAAAAAGGGTGGTACCTGTGCATTTATCGATGCTGAACATGCCTTAGATCCACAATATGCCCGCAAACTGGG
TGTAGACATTGATAACCTCTTGGTTTCTCAACCTGACCATGGTGAACAAGCTTTAGAAATCGCAGATATGTTAGTGCGTT
CTGGTGCGGTTGATATGATCGTGGTCGACTCTGTTGCAGCACTCACACCACGTGCCGAGATTGAAGGTGAAATGGGTGAC
TCCCACATGGGCTTACAGGCTCGTCTTATGAGTCAGGCCCTACGTAAAATTACCGGTAACGCCAAACGCTCCAACTGTAT
GGTCATTTTCATTAACCAAATTCGTATGAAAATTGGAGTCATGTTTGGTAGCCCAGAAACAACAACTGGGGGGAATGCAC
TTAAATTCTATGCTTCGGTACGTCTAGATATACGCCGTGCTGGTCAAGTAAAAGAGGGTGATGAAATTGTAGGTTCCGAA
ACCAAAGTCAAAGTCGTTAAGAACAAAATGGCACCTCCATTTAAAGAAGCGCTCTTCCAAATTATGTATGGTAAAGGAAC
CAATCATCTTGCAGAGTTGGTTGATTTGGCGGTGCAGCTAGAATTGGTACAAAAAGCAGGTGCTTGGTATTCTTATCAAG
GCAGCAAAATTGGTCAAGGTAAAAACAATGCCATCCGTCATCTAGAAGAAAATACACAGCTTGCACAAGATTTAGATCGC
ATGATTCGCGACCAGCTTCTCGCCAAAACCGTACCTGCAGAAGAAAGCCCAGCAGAACCTGTCGCAGACGGCGATTTACT
CGACGCCTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B2M0J1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

85.836

100

0.868
  recA Acinetobacter baumannii D1279779

88.047

98.281

0.865
  recA Pseudomonas stutzeri DSM 10701

72.911

99.427

0.725
  recA Vibrio cholerae strain A1552

74.312

93.696

0.696
  recA Vibrio cholerae O1 biovar El Tor strain E7946

74.312

93.696

0.696
  recA Glaesserella parasuis strain SC1401

71.914

92.837

0.668
  recA Ralstonia pseudosolanacearum GMI1000

69.775

89.112

0.622
  recA Neisseria gonorrhoeae MS11

66.667

92.837

0.619
  recA Neisseria gonorrhoeae MS11

66.667

92.837

0.619
  recA Neisseria gonorrhoeae strain FA1090

66.667

92.837

0.619
  recA Streptococcus mitis SK321

60.405

99.14

0.599
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.575

95.702

0.599
  recA Helicobacter pylori strain NCTC11637

60.526

97.994

0.593
  recA Streptococcus mutans UA159

62.805

93.983

0.59
  recA Helicobacter pylori 26695

60.234

97.994

0.59
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.385

93.696

0.585
  recA Streptococcus pyogenes NZ131

62.462

93.123

0.582
  recA Streptococcus mitis NCTC 12261

61.963

93.41

0.579
  recA Streptococcus pneumoniae Rx1

61.963

93.41

0.579
  recA Streptococcus pneumoniae D39

61.963

93.41

0.579
  recA Streptococcus pneumoniae R6

61.963

93.41

0.579
  recA Streptococcus pneumoniae TIGR4

61.963

93.41

0.579
  recA Bacillus subtilis subsp. subtilis str. 168

62.229

92.55

0.576
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.856

93.696

0.57
  recA Latilactobacillus sakei subsp. sakei 23K

57.91

95.989

0.556
  recA Lactococcus lactis subsp. cremoris KW2

58.824

92.55

0.544

Multiple sequence alignment