Detailed information NTG0185431

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A9404_RS10720
• Genome accession: NZ_CP016027
• Coordinates: 2410546..2411592 (+)
• Length: 348 a.a.
• NCBI ID: WP_066101350.1
• Uniprot ID: A0A191ZIW3
• Organism: Halothiobacillus diazotrophicus strain LS2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2405546..2416592

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9404_RS10705 (A9404_10705)	rnr	2405936..2408344 (+)	2409	WP_082922916.1	ribonuclease R	-
A9404_RS10710 (A9404_10710)	rlmB	2408347..2409156 (+)	810	WP_066101345.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
A9404_RS10715 (A9404_10715)	-	2409273..2410451 (+)	1179	WP_066101347.1	pyridoxal phosphate-dependent aminotransferase	-
A9404_RS10720 (A9404_10720)	recA	2410546..2411592 (+)	1047	WP_066101350.1	recombinase RecA	Machinery gene
A9404_RS10725 (A9404_10725)	-	2411633..2412118 (+)	486	WP_066101352.1	regulatory protein RecX	-
A9404_RS10730 (A9404_10730)	alaS	2412259..2414874 (+)	2616	WP_066101355.1	alanine--tRNA ligase	-
A9404_RS10735 (A9404_10735)	-	2415093..2416325 (+)	1233	WP_066101358.1	aspartate kinase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37283.67 Da
• Isoelectric Point: 5.7478

>NTDB_id=185431 A9404_RS10720 WP_066101350.1 2410546..2411592(+) (recA) [Halothiobacillus diazotrophicus strain LS2]
MDENRKKALTAALTQIERQFGKGAVMRMNDTAGVDVPVVSTGSIALDAALGIGGLPRGRVIEIYGPESSGKTTLTLQVIA
QAQKTGGVCAFVDAEHALDPTYAQKLGVNVDDLLVSQPDTGEQALEIADMLVRSGAVDVVVIDSVAALVPKAEIEGEMGD
SHVGLQARLMSQALRKLTGNIKRTNCMVIFINQIRMKIGVSYGSPETTTGGNALKFYSSVRLDIRRIGAVKKGEEIIGNQ
TRIKVVKNKMAPPFKVVDVDILYGEGISRLMELIDMATQHGLIQKAGAWYSCGDIRLGQGKDNARQYFVEHPELADEIEA
KLRAQMHATGGSGRNAPANDDDLPPSDD

Nucleotide

• Length: 1047 bp

>NTDB_id=185431 A9404_RS10720 WP_066101350.1 2410546..2411592(+) (recA) [Halothiobacillus diazotrophicus strain LS2]
ATGGATGAGAATCGCAAGAAGGCCCTGACCGCCGCATTGACCCAGATCGAGCGGCAGTTCGGCAAGGGCGCCGTGATGCG
GATGAACGATACGGCCGGCGTCGACGTCCCCGTGGTCAGCACGGGGTCGATCGCGCTGGACGCCGCACTTGGCATCGGCG
GCCTGCCGCGGGGGCGGGTGATCGAGATCTATGGCCCGGAATCCTCGGGCAAGACGACCCTCACTCTGCAGGTCATCGCC
CAGGCGCAGAAAACCGGCGGCGTCTGCGCCTTCGTGGATGCCGAGCATGCCCTGGACCCCACTTATGCCCAGAAGCTCGG
CGTGAATGTCGATGATCTGCTGGTCAGTCAGCCGGATACCGGTGAGCAGGCGCTTGAAATTGCGGACATGCTCGTGCGTT
CGGGCGCGGTCGACGTCGTGGTGATCGACTCGGTGGCCGCCCTGGTGCCCAAGGCCGAGATTGAGGGCGAGATGGGCGAC
TCCCACGTGGGTCTTCAGGCGCGACTGATGAGTCAGGCCCTGCGCAAGCTCACCGGCAACATCAAGCGCACCAACTGCAT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGTGTCAGCTACGGCAGTCCGGAAACCACCACCGGCGGCAACGCCC
TGAAGTTCTACTCGTCCGTCCGTCTGGACATCCGTCGTATCGGGGCGGTGAAGAAGGGCGAGGAGATCATCGGCAACCAG
ACGCGGATCAAGGTAGTCAAGAACAAGATGGCGCCGCCGTTCAAGGTCGTCGACGTCGATATCCTGTATGGCGAGGGTAT
TTCCCGCCTCATGGAGCTGATCGACATGGCCACCCAGCATGGTCTGATCCAGAAGGCGGGCGCCTGGTATTCCTGTGGCG
ACATCCGCCTCGGCCAGGGCAAGGATAACGCGCGTCAGTACTTCGTGGAGCACCCGGAGCTGGCCGACGAGATCGAGGCC
AAGCTGCGCGCGCAGATGCATGCAACCGGCGGCTCGGGCCGCAATGCGCCCGCAAACGATGATGATCTGCCGCCCTCGGA
CGATTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A191ZIW3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	70.381	97.989	0.69
recA	Acinetobacter baumannii D1279779	71.471	95.69	0.684
recA	Acinetobacter baylyi ADP1	68.696	99.138	0.681
recA	Neisseria gonorrhoeae MS11	68.249	96.839	0.661
recA	Neisseria gonorrhoeae MS11	68.249	96.839	0.661
recA	Neisseria gonorrhoeae strain FA1090	68.249	96.839	0.661
recA	Glaesserella parasuis strain SC1401	66.471	97.701	0.649
recA	Ralstonia pseudosolanacearum GMI1000	71.656	90.23	0.647
recA	Vibrio cholerae strain A1552	68.405	93.678	0.641
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.405	93.678	0.641
recA	Latilactobacillus sakei subsp. sakei 23K	60.983	99.425	0.606
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.961	95.69	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.329	95.115	0.583
recA	Streptococcus mutans UA159	61.774	93.966	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	63.125	91.954	0.58
recA	Streptococcus pyogenes NZ131	60.976	94.253	0.575
recA	Helicobacter pylori strain NCTC11637	61.42	93.103	0.572
recA	Helicobacter pylori 26695	61.111	93.103	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	93.966	0.569
recA	Streptococcus pneumoniae Rx1	60.55	93.966	0.569
recA	Streptococcus pneumoniae D39	60.55	93.966	0.569
recA	Streptococcus pneumoniae R6	60.55	93.966	0.569
recA	Streptococcus pneumoniae TIGR4	60.55	93.966	0.569
recA	Lactococcus lactis subsp. cremoris KW2	60.494	93.103	0.563
recA	Streptococcus mitis NCTC 12261	59.939	93.966	0.563
recA	Streptococcus mitis SK321	59.633	93.966	0.56