Detailed information NTG0176836

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A4W93_RS01155
• Genome accession: NZ_CP015118
• Coordinates: 258787..259890 (+)
• Length: 367 a.a.
• NCBI ID: WP_085748863.1
• Uniprot ID: A0A1W6L2Y8
• Organism: Piscinibacter gummiphilus strain NS21
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 253787..264890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W93_RS01135 (A4W93_01115)	rodA	254111..255268 (+)	1158	WP_085748860.1	rod shape-determining protein RodA	-
A4W93_RS01140 (A4W93_01120)	-	255269..256336 (-)	1068	WP_085748861.1	patatin-like phospholipase family protein	-
A4W93_RS01145 (A4W93_01125)	-	256401..257846 (-)	1446	WP_085753998.1	sensor histidine kinase	-
A4W93_RS01150 (A4W93_01130)	-	257953..258624 (-)	672	WP_085748862.1	response regulator transcription factor	-
A4W93_RS01155 (A4W93_01135)	recA	258787..259890 (+)	1104	WP_085748863.1	recombinase RecA	Machinery gene
A4W93_RS01160 (A4W93_01140)	-	260025..260570 (+)	546	WP_085748864.1	regulatory protein RecX	-
A4W93_RS01165 (A4W93_01145)	sucC	261061..262221 (+)	1161	WP_085748865.1	ADP-forming succinate--CoA ligase subunit beta	-
A4W93_RS01170 (A4W93_01150)	sucD	262247..263140 (+)	894	WP_085748866.1	succinate--CoA ligase subunit alpha	-
A4W93_RS01175 (A4W93_01155)	-	263313..264065 (+)	753	WP_085748867.1	TerC family protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 39127.05 Da
• Isoelectric Point: 4.9980

>NTDB_id=176836 A4W93_RS01155 WP_085748863.1 258787..259890(+) (recA) [Piscinibacter gummiphilus strain NS21]
MDAAVKPATLNTEKAKALQAALAQIEKQFGKGTIMRLGEGEVIDDIDVVSTGSLGLDAALGVGGLPRGRVVEIYGPESSG
KTTLTLQVISEMQKLGGTCAFIDAEHALDVQYAQKLGVNLQDLLISQPDTGEQALEIVDALVRSASVDLVVVDSVAALTP
KAEIEGEMGDSLPGLQARLMSQALRKLTGTIKKNNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
KKGEEVIGNETKVKVVKNKVSPPFKTAEFDILYGQGISREGEVIDMGVEAKVLEKSGSWYAYNGEKIGQGKDNAREFLKE
NPDLAVEIENKVREALGIPLLPVAEPVVAEAGKPAKKAKAAAPKDEE

Nucleotide

• Length: 1104 bp

>NTDB_id=176836 A4W93_RS01155 WP_085748863.1 258787..259890(+) (recA) [Piscinibacter gummiphilus strain NS21]
ATGGACGCCGCCGTCAAACCCGCCACCCTCAACACCGAAAAGGCCAAGGCCCTGCAGGCTGCACTCGCCCAGATCGAGAA
GCAGTTCGGCAAGGGCACCATCATGCGCCTCGGTGAAGGCGAGGTCATCGACGACATCGACGTGGTCTCCACCGGCTCCC
TCGGCCTCGACGCCGCGCTGGGCGTGGGCGGCCTGCCCCGCGGCCGCGTCGTCGAGATCTACGGCCCCGAGTCCAGCGGC
AAGACCACGCTCACGCTGCAGGTCATCTCCGAGATGCAGAAGCTCGGCGGCACCTGCGCCTTCATCGACGCCGAACACGC
GCTCGACGTGCAATACGCCCAGAAGCTCGGCGTGAACCTGCAAGACCTGCTGATCAGCCAGCCCGACACCGGCGAACAGG
CCCTCGAGATCGTCGACGCGCTGGTGCGCTCCGCCTCGGTCGACCTGGTCGTCGTCGACTCGGTGGCCGCGCTCACGCCC
AAGGCCGAAATCGAAGGCGAGATGGGCGACTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCT
CACTGGCACCATCAAGAAGAACAACACGATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTT
CGCCCGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTCGACATCCGCCGCATCGGCTCCATC
AAGAAGGGCGAAGAGGTCATCGGCAACGAAACCAAGGTCAAGGTCGTCAAGAACAAGGTCTCGCCCCCGTTCAAGACGGC
TGAGTTCGACATCCTCTACGGCCAGGGCATCAGCCGCGAAGGCGAGGTCATCGACATGGGTGTCGAGGCCAAGGTGCTCG
AGAAGTCCGGCTCCTGGTACGCCTACAACGGTGAAAAGATCGGCCAGGGCAAAGACAACGCCCGCGAGTTCCTGAAAGAG
AACCCCGACCTCGCCGTCGAGATCGAGAACAAGGTGCGCGAAGCCCTGGGCATCCCGCTGCTGCCGGTGGCCGAACCCGT
GGTGGCCGAGGCCGGCAAGCCGGCCAAGAAGGCCAAGGCAGCCGCTCCGAAAGACGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (16-278)

3D structure

• AlphaFold DB: A0A1W6L2Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	81.953	92.098	0.755
recA	Vibrio cholerae O1 biovar El Tor strain E7946	66.947	97.275	0.651
recA	Vibrio cholerae strain A1552	66.947	97.275	0.651
recA	Neisseria gonorrhoeae MS11	71.299	90.191	0.643
recA	Neisseria gonorrhoeae MS11	71.299	90.191	0.643
recA	Neisseria gonorrhoeae strain FA1090	71.299	90.191	0.643
recA	Pseudomonas stutzeri DSM 10701	70.948	89.101	0.632
recA	Acinetobacter baylyi ADP1	70.642	89.101	0.629
recA	Acinetobacter baumannii D1279779	70.031	89.101	0.624
recA	Glaesserella parasuis strain SC1401	70.062	88.283	0.619
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.487	92.371	0.605
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.061	89.918	0.594
recA	Bacillus subtilis subsp. subtilis str. 168	65.749	89.101	0.586
recA	Helicobacter pylori 26695	65.046	89.646	0.583
recA	Helicobacter pylori strain NCTC11637	64.742	89.646	0.58
recA	Latilactobacillus sakei subsp. sakei 23K	64.242	89.918	0.578
recA	Lactococcus lactis subsp. cremoris KW2	61.212	89.918	0.55
recA	Streptococcus mutans UA159	60	89.918	0.54
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.308	88.556	0.534
recA	Streptococcus pyogenes NZ131	59.036	90.463	0.534
recA	Streptococcus pneumoniae Rx1	58.258	90.736	0.529
recA	Streptococcus pneumoniae D39	58.258	90.736	0.529
recA	Streptococcus pneumoniae TIGR4	58.258	90.736	0.529
recA	Streptococcus pneumoniae R6	58.258	90.736	0.529
recA	Streptococcus mitis NCTC 12261	57.958	90.736	0.526
recA	Streptococcus mitis SK321	57.958	90.736	0.526