Detailed information NTG0175246

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A3Q34_RS05775
• Genome accession: NZ_CP014944
• Coordinates: 1356922..1357959 (-)
• Length: 345 a.a.
• NCBI ID: WP_070374496.1
• Uniprot ID: A0A1D8RTI5
• Organism: Colwellia sp. PAMC 20917
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1351922..1362959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A3Q34_RS05770 (A3Q34_05770)	metA	1355525..1356472 (-)	948	WP_070374495.1	homoserine O-succinyltransferase	-
A3Q34_RS05775 (A3Q34_05775)	recA	1356922..1357959 (-)	1038	WP_070374496.1	recombinase RecA	Machinery gene
A3Q34_RS05780 (A3Q34_05780)	mutS	1358297..1360876 (+)	2580	WP_070374497.1	DNA mismatch repair protein MutS	-
A3Q34_RS05785 (A3Q34_05785)	rpoS	1360939..1361862 (-)	924	WP_070374498.1	RNA polymerase sigma factor RpoS	-
A3Q34_RS05790 (A3Q34_05790)	-	1361946..1362806 (-)	861	WP_231907435.1	peptidoglycan DD-metalloendopeptidase family protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37175.81 Da
• Isoelectric Point: 5.3474

>NTDB_id=175246 A3Q34_RS05775 WP_070374496.1 1356922..1357959(-) (recA) [Colwellia sp. PAMC 20917]
MKDDKEKALAAALSQIERQFGKGSIMKLGDNNTMDVETISTGSLALDVALGAGGLPLGRVVEIYGPESSGKTTLTLEVIA
EAQRNGKVCAFVDAEHALDPIYAEKLGVNINELLVSQPDTGEQALEICDMLTRSGAIDVIVVDSVAALTPKAEIEGDMGD
SHMGLQARMLSQAMRKLTGNLKKSNTMIIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKAGDEIIGNE
TRVKVVKNKIAPPFKQAEFQILYGEGINSLGELIDLGVLHNMVEKAGSWYSYNGDRIGQGKANAAKSLAEKPEMAKELDK
RLRDLLLIKSVRASDKPAKEEEAVE

Nucleotide

• Length: 1038 bp

>NTDB_id=175246 A3Q34_RS05775 WP_070374496.1 1356922..1357959(-) (recA) [Colwellia sp. PAMC 20917]
ATGAAAGACGATAAAGAAAAAGCATTAGCAGCAGCATTAAGCCAAATCGAAAGACAATTTGGTAAAGGCTCAATTATGAA
GCTTGGTGATAATAACACCATGGATGTTGAAACCATTTCTACAGGTTCATTGGCGCTTGATGTTGCACTCGGTGCGGGTG
GTTTGCCACTTGGGCGTGTTGTTGAAATTTATGGTCCTGAATCAAGTGGTAAAACAACGCTAACGCTTGAAGTTATTGCT
GAAGCTCAGCGTAACGGTAAAGTTTGTGCCTTTGTTGATGCTGAGCATGCACTTGACCCTATTTATGCTGAAAAGTTAGG
TGTTAACATCAACGAATTACTTGTTTCTCAGCCTGATACCGGTGAGCAAGCATTGGAAATTTGTGACATGCTAACGCGTT
CAGGAGCTATAGACGTTATTGTTGTCGATTCTGTTGCTGCCCTTACACCCAAAGCTGAAATTGAAGGCGATATGGGCGAC
TCACACATGGGTTTACAAGCCCGTATGCTTTCACAAGCAATGCGTAAGTTAACGGGTAACTTGAAAAAATCAAATACCAT
GATTATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACTACAACGGGTGGTAATGCAC
TTAAGTTTTATGCTTCTGTTCGTTTAGATATTCGACGTATCGGCGCTGTAAAAGCAGGCGACGAAATTATTGGTAACGAA
ACCCGCGTAAAAGTGGTTAAAAACAAAATAGCACCTCCTTTTAAACAAGCAGAATTTCAGATTTTATATGGCGAAGGTAT
TAACAGCTTAGGTGAATTAATTGATTTAGGTGTTTTGCATAACATGGTTGAAAAAGCCGGTTCTTGGTATAGCTACAATG
GCGATCGTATTGGCCAAGGTAAAGCAAATGCGGCTAAATCTTTAGCAGAAAAACCTGAAATGGCAAAAGAGCTTGATAAG
CGTTTACGCGACTTACTGTTAATTAAAAGTGTAAGAGCAAGTGACAAACCAGCTAAAGAAGAAGAAGCCGTAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A1D8RTI5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	81.651	94.783	0.774
recA	Vibrio cholerae O1 biovar El Tor strain E7946	81.651	94.783	0.774
recA	Acinetobacter baylyi ADP1	71.594	100	0.716
recA	Pseudomonas stutzeri DSM 10701	70.845	99.42	0.704
recA	Acinetobacter baumannii D1279779	69.883	99.13	0.693
recA	Neisseria gonorrhoeae MS11	71.166	94.493	0.672
recA	Neisseria gonorrhoeae MS11	71.166	94.493	0.672
recA	Neisseria gonorrhoeae strain FA1090	71.166	94.493	0.672
recA	Glaesserella parasuis strain SC1401	70.062	93.913	0.658
recA	Ralstonia pseudosolanacearum GMI1000	70.096	90.145	0.632
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.058	99.42	0.597
recA	Streptococcus pneumoniae TIGR4	58.689	100	0.597
recA	Streptococcus pneumoniae Rx1	58.689	100	0.597
recA	Streptococcus pneumoniae D39	58.689	100	0.597
recA	Streptococcus pneumoniae R6	58.689	100	0.597
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.261	96.522	0.591
recA	Helicobacter pylori strain NCTC11637	62.154	94.203	0.586
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	93.043	0.586
recA	Helicobacter pylori 26695	61.846	94.203	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.875	92.754	0.574
recA	Latilactobacillus sakei subsp. sakei 23K	57.434	99.42	0.571
recA	Streptococcus mitis SK321	60.494	93.913	0.568
recA	Streptococcus mitis NCTC 12261	60.494	93.913	0.568
recA	Streptococcus mutans UA159	60	94.203	0.565
recA	Streptococcus pyogenes NZ131	59.692	94.203	0.562
recA	Lactococcus lactis subsp. cremoris KW2	58.282	94.493	0.551