Detailed information NTG0175208

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AYR58_RS07595
• Genome accession: NZ_CP014936
• Coordinates: 1570528..1571580 (+)
• Length: 350 a.a.
• NCBI ID: WP_014215198.1
• Uniprot ID: G8PCL6
• Organism: Pediococcus claussenii strain TMW 2.54
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1565528..1576580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYR58_RS07575 (AYR58_07575)	ymfI	1566695..1567417 (+)	723	WP_014215194.1	elongation factor P 5-aminopentanone reductase	-
AYR58_RS07580 (AYR58_07580)	-	1567567..1568418 (+)	852	WP_014215195.1	helix-turn-helix domain-containing protein	-
AYR58_RS07585 (AYR58_07585)	pgsA	1568430..1569011 (+)	582	WP_014215196.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AYR58_RS07590 (AYR58_07590)	-	1569204..1570442 (+)	1239	WP_014215197.1	competence/damage-inducible protein A	-
AYR58_RS07595 (AYR58_07595)	recA	1570528..1571580 (+)	1053	WP_014215198.1	recombinase RecA	Machinery gene
AYR58_RS07600 (AYR58_07600)	rny	1571809..1573374 (+)	1566	WP_324608737.1	ribonuclease Y	-
AYR58_RS07605 (AYR58_07605)	mutS	1573787..1576399 (+)	2613	WP_014215200.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37857.07 Da
• Isoelectric Point: 5.1124

>NTDB_id=175208 AYR58_RS07595 WP_014215198.1 1570528..1571580(+) (recA) [Pediococcus claussenii strain TMW 2.54]
MADERKTALDNALKKIEKNFGKGSIMRMGDAVDTKISTIPSGSLALDEALGVGGFPKGRIVEIYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENAMDPVYAQNLGVNIDELLLSQPDTGEEGLEIADALVSSGAIDLVVIDSVAALVPRAEIDGEMGD
AHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYATIRLEVRRAEQLKDGSDVIGNR
VRIKVVKNKVAPPFRKAEVDIMYGHGISQTGELIDMAAEKEIVKKSGSWYSYGDDRIGQGRENAKQYLVDHPDVKEELFA
KVREAYGIAEEGEETTKTKKEDDPSKLELN

Nucleotide

• Length: 1053 bp

>NTDB_id=175208 AYR58_RS07595 WP_014215198.1 1570528..1571580(+) (recA) [Pediococcus claussenii strain TMW 2.54]
GTGGCAGACGAACGAAAAACGGCATTAGATAATGCTTTAAAAAAAATTGAAAAGAATTTTGGTAAGGGGTCAATCATGCG
AATGGGTGATGCGGTTGATACTAAAATATCAACAATTCCTAGTGGATCATTGGCACTTGATGAGGCTCTAGGAGTTGGCG
GATTTCCCAAGGGTAGAATTGTTGAAATTTATGGCCCTGAAAGTTCAGGTAAAACGACAGTAGCACTACATGCTGTTGCT
GAGGTACAAAAACGTGGCGGTACGGCTGCTTATATTGATGCCGAAAACGCAATGGATCCTGTATATGCCCAAAATTTGGG
AGTTAATATTGATGAACTATTACTTTCACAGCCGGATACAGGAGAAGAAGGTCTTGAAATTGCTGATGCCCTTGTTTCTA
GTGGGGCAATTGACCTAGTGGTTATAGATTCAGTTGCAGCGTTAGTACCGCGTGCTGAAATTGACGGAGAGATGGGTGAC
GCACACGTTGGATTACAGGCGCGTTTGATGTCTCAAGCACTTCGTAAACTATCTGGTTCAATCAATAAAACAAAGACAAT
TGCTTTATTTATTAATCAGATTCGTGAAAAAGTTGGTGTAATGTTTGGAAACCCAGAAGTAACTCCAGGTGGACGAGCAT
TGAAGTTCTACGCAACGATTCGATTAGAAGTAAGACGAGCTGAACAATTGAAGGATGGTTCAGATGTGATTGGAAATCGA
GTACGTATTAAGGTGGTCAAGAATAAGGTCGCACCGCCATTCCGAAAAGCTGAAGTTGACATCATGTATGGGCACGGTAT
TTCTCAAACTGGTGAATTAATTGATATGGCTGCTGAAAAAGAGATAGTTAAAAAAAGTGGTTCTTGGTATTCATATGGGG
ATGACCGAATTGGACAAGGGCGTGAGAACGCTAAGCAGTATTTGGTTGATCATCCGGATGTTAAAGAAGAATTGTTTGCC
AAGGTACGTGAAGCATATGGTATTGCTGAAGAGGGCGAAGAAACCACTAAAACAAAAAAAGAAGACGATCCAAGTAAACT
TGAATTAAATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: G8PCL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	81.765	97.143	0.794
recA	Bacillus subtilis subsp. subtilis str. 168	73.795	94.857	0.7
recA	Streptococcus pneumoniae D39	66.382	100	0.666
recA	Streptococcus pneumoniae R6	66.382	100	0.666
recA	Streptococcus pneumoniae TIGR4	66.382	100	0.666
recA	Streptococcus pneumoniae Rx1	66.382	100	0.666
recA	Streptococcus mitis SK321	67.347	98	0.66
recA	Streptococcus mutans UA159	64.607	100	0.657
recA	Streptococcus mitis NCTC 12261	67.055	98	0.657
recA	Lactococcus lactis subsp. cremoris KW2	68.263	95.429	0.651
recA	Streptococcus pyogenes NZ131	68.278	94.571	0.646
recA	Neisseria gonorrhoeae MS11	59.312	99.714	0.591
recA	Neisseria gonorrhoeae MS11	59.312	99.714	0.591
recA	Neisseria gonorrhoeae strain FA1090	59.312	99.714	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.89	93.714	0.58
recA	Ralstonia pseudosolanacearum GMI1000	61.28	93.714	0.574
recA	Acinetobacter baylyi ADP1	56.609	99.429	0.563
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.434	98	0.563
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.877	92.571	0.554
recA	Vibrio cholerae strain A1552	59.877	92.571	0.554
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.692	92.857	0.554
recA	Pseudomonas stutzeri DSM 10701	59.443	92.286	0.549
recA	Helicobacter pylori strain NCTC11637	58.182	94.286	0.549
recA	Helicobacter pylori 26695	58.182	94.286	0.549
recA	Glaesserella parasuis strain SC1401	59.19	91.714	0.543
recA	Acinetobacter baumannii D1279779	57.716	92.571	0.534