Detailed information NTG0159566

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ASJ33_RS00425
• Genome accession: NZ_CP013074
• Coordinates: 81294..82307 (+)
• Length: 337 a.a.
• NCBI ID: WP_012882718.1
• Uniprot ID: A0A0C6EX13
• Organism: Dehalococcoides mccartyi strain CG3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 76294..87307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASJ33_RS00390 (ASJ33_00385)	tatC	77540..78328 (-)	789	WP_012882711.1	twin-arginine translocase subunit TatC	-
ASJ33_RS00395 (ASJ33_00390)	-	78325..78612 (-)	288	WP_023652925.1	Sec-independent protein translocase subunit TatA/TatB	-
ASJ33_RS00400 (ASJ33_00395)	-	78679..78915 (-)	237	WP_012882713.1	twin-arginine translocase TatA/TatE family subunit	-
ASJ33_RS00405 (ASJ33_00400)	tatA	79006..79203 (-)	198	WP_012882714.1	twin-arginine translocase TatA/TatE family subunit	-
ASJ33_RS00410 (ASJ33_00405)	folP	79430..80278 (+)	849	WP_041331617.1	dihydropteroate synthase	-
ASJ33_RS00415 (ASJ33_00410)	folK	80269..80799 (+)	531	WP_023652927.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
ASJ33_RS00420 (ASJ33_00415)	queD	80799..81170 (+)	372	WP_041331618.1	6-carboxytetrahydropterin synthase QueD	-
ASJ33_RS00425 (ASJ33_00420)	recA	81294..82307 (+)	1014	WP_012882718.1	recombinase RecA	Machinery gene
ASJ33_RS00430 (ASJ33_00425)	-	82396..83040 (+)	645	WP_041331619.1	regulatory protein RecX	-
ASJ33_RS00435 (ASJ33_00430)	rny	83109..84692 (+)	1584	WP_023652930.1	ribonuclease Y	-
ASJ33_RS00440 (ASJ33_00435)	-	84704..85474 (+)	771	WP_041331620.1	TIGR00282 family metallophosphoesterase	-
ASJ33_RS00445 (ASJ33_00440)	-	85477..86340 (+)	864	WP_023652932.1	PHP domain-containing protein	-
ASJ33_RS00450 (ASJ33_00445)	-	86337..87035 (+)	699	WP_023652933.1	glycerol-3-phosphate acyltransferase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36146.51 Da
• Isoelectric Point: 6.2983

>NTDB_id=159566 ASJ33_RS00425 WP_012882718.1 81294..82307(+) (recA) [Dehalococcoides mccartyi strain CG3]
MTTEKDKALELTVGIIEKRFGKGSIMKLSDPSFRQTVEFIPTSSLALDIALGVGGIPRGRIAEIFGPEGSGKTTLAQHII
AQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTSSIGQTRTAVIFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTIAVGT
RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQGRESAKNYLAANPDLAQEIE
EKIRASAVTLCSIGDGD

Nucleotide

• Length: 1014 bp

>NTDB_id=159566 ASJ33_RS00425 WP_012882718.1 81294..82307(+) (recA) [Dehalococcoides mccartyi strain CG3]
ATGACCACGGAAAAAGATAAGGCACTGGAACTCACTGTCGGTATAATAGAAAAACGTTTTGGCAAGGGTTCAATAATGAA
ACTGAGTGACCCTTCCTTCCGGCAAACAGTTGAGTTCATCCCTACAAGTTCACTGGCACTTGATATTGCCCTGGGCGTTG
GCGGAATTCCCAGAGGACGGATAGCTGAAATATTCGGCCCTGAAGGCTCCGGCAAGACTACTCTTGCCCAGCATATTATT
GCCCAAGCCCAAAAAATGGGCGAAAAAGCCGCCTATATAGACGTGGAACATGCCCTTGATCCTAAATACGCTTCAACCTG
CGGGGTTAATCTGGATGAGCTTTTAATATCTCAGCCGGATACCGGTGAGGAAGCGCTTGGTATTGCCGAAGAGTTGGTGA
GAAGCACCGCCATAGGGGTTATAGTGATTGACAGTGTGGCAGCGCTGGTACCCAAAGCCGAAATAGAAGGCGACATGGGT
GACTCACATGTAGGTTTGCAGGCCAGACTTATGTCTCAGGCACTGCGGAAATTGACCTCTTCCATCGGGCAAACCAGAAC
GGCCGTTATCTTTATAAACCAGTTGAGAGAAAAAGTGGGTGTCATGTTCGGCAATCCCGAAGTCACCCCCGGCGGCCGGG
CGCTTAAATTTTACAGTTCGGTGCGTATAGATCTAAGGCGCATAGAAACCATCAAGCAGGGCACCATAGCAGTTGGTACA
CGCGTAAGAGCCAAAGTGGTAAAAAACAAGGTTGCTCCTCCTTTCAGGACAGCCGAGTTTGATATCATGTTTGACTCTGG
TATCAGCCGCGAGGGCAACCTTATTGATTTGGGCGTAACCAGTGAAGTTATAAGGAAAGCAGGGGCTTTCTTTTCCTACG
GTGACATTCGCCTGGGGCAAGGCAGAGAGAGCGCCAAAAACTATCTGGCGGCAAATCCAGATCTGGCGCAGGAAATTGAA
GAAAAAATACGTGCCTCAGCAGTCACCCTTTGCAGTATTGGCGATGGCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A0C6EX13

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	62.848	95.846	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	63.043	95.549	0.602
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae strain FA1090	60.308	96.439	0.582
recA	Streptococcus mitis NCTC 12261	60	96.439	0.579
recA	Streptococcus mitis SK321	60	96.439	0.579
recA	Streptococcus pneumoniae R6	59.509	96.736	0.576
recA	Streptococcus pneumoniae Rx1	59.509	96.736	0.576
recA	Streptococcus pneumoniae D39	59.509	96.736	0.576
recA	Streptococcus pneumoniae TIGR4	59.509	96.736	0.576
recA	Pseudomonas stutzeri DSM 10701	59.692	96.439	0.576
recA	Streptococcus pyogenes NZ131	59.692	96.439	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.568	96.142	0.573
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.021	97.033	0.573
recA	Lactococcus lactis subsp. cremoris KW2	58.716	97.033	0.57
recA	Vibrio cholerae strain A1552	59.259	96.142	0.57
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.259	96.142	0.57
recA	Glaesserella parasuis strain SC1401	59.502	95.252	0.567
recA	Ralstonia pseudosolanacearum GMI1000	61.812	91.691	0.567
recA	Streptococcus mutans UA159	58.462	96.439	0.564
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.798	97.033	0.561
recA	Helicobacter pylori strain NCTC11637	58.333	96.142	0.561
recA	Helicobacter pylori 26695	58.333	96.142	0.561
recA	Acinetobacter baylyi ADP1	56.325	98.516	0.555
recA	Acinetobacter baumannii D1279779	55.689	99.11	0.552